| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is yphG [H]
Identifier: 159899673
GI number: 159899673
Start: 3981955
End: 3984108
Strand: Direct
Name: yphG [H]
Synonym: Haur_3155
Alternate gene names: 159899673
Gene position: 3981955-3984108 (Clockwise)
Preceding gene: 159899671
Following gene: 159899674
Centisome position: 62.74
GC content: 51.39
Gene sequence:
>2154_bases ATGTTTCGTCGAATAACTCTGAGTTTTTGCTTATTAATTGTCAGTTTGAGTTTCGTGCCCCAACGCCCAAGTTATGCTGC ATTTACTGATGGTTTTGCCGATTCGGCCTTTCGCCAACGCTGGCAGCGTGCCGATCAAGCAGTGGCCGAAGGTCAAACCA GCCGTTCGTGGGTTTGGGGTCAAAACATCGGCCCACGAATAATCGAGCGCTATCAGCAATCGCCCCAAGCCAGCCGCCTC GTGCAATATTTTGATAAAGCTCGCATGGAAATTAGCCAGCCCGCTGCTGATCGTACCAGTGAGTGGTTTGCCACCAATGG TTTGTTGGTCGTTGAACTGATCAGCGGCCAGATGCAAACAGGCGATCAACGCTTCGAACCACGGACAGCAGCTAATGTGC CAATTGCTGGCGATCCTGCTAGCTCAAGCCCAACCTATGCTAGCCTTGCGCCAATCGCGACCACCAACGGCGATCATCGC AGCGAAAATCGCCAAGGCCAACGGATTAGCAGCCTGCTCGCGGCAAACGGCCAGATCAGCGATCAGCCAAATTTGGCAAC TGCCAACACCACCATCGTGCAGTATGAAAGCGTCACGGGCCATAACGTGCCCAAAGTATTTTTCGATTTTCAGCAATCGT TAAGCACTGTAACCAATGTGTTAGGGACGTTTGGCTACCCAATCACCGAGGCATACTGGATCGACACAACGATTAACGGC CAAGCCCAACGCGTGCTATTCCAAGCTTTTGAACGCCGTGTGCTGACCTACAATCCCAATAATTCGGCGAATTGGCAAGT TGAAATGGGCAATGTGGGCAGTCATTACTATCGCTGGCGCTATACCACGCCAATGTATTATTTTCAGGATAGCAGCATTG CGGCTAAAGTTTCTGAGGCTGGCACATTGGCCATCAATACCGAAGGCTATCAGCCAGCGCTGGTCGATAGCCTACCCAAC GATCCAATTTACCCCTACAAACGGATTGATCGCAGCAAAATCACAGGCTATCAACCCAAACATTATCGTTTGCTCAAGCT TGAAAATCGTTATGTCACGCTAACGATCTTACCAGAACTGGGCGGACGAGTTTATCAGCTGATCAACAAAGCTACAGGCC AGAACTTGCTCTATCAAAATCCGGTGATCAAAGCCAGTCATTTAGGTCAACGGGGTTGGTGGCTGGCCGCAGGTGGTATC GAATGGGCCGCCCCAACCGAGGAGCATGGCTACCTCGAATCCGAGCCATGGGATTATCGCTTGGAGCAAACCAACGAGGC CGCACGGGTGATCGTTTCAACAACCGAGCGCCACACTGGCATTCAAATTGAAATCACGATTGAGCTAACCAACGATAGCC AAATTGTGAATATGCGCGGCAATTATCGCAACCCAACTGCTAGCCCACAACCATTTCAATTTTGGATGAATGCCATGATC GCACCTGGCGGGATCAACCATTTGCAACGTAGCCTACATTTTGCCGTGCCAACCCAGCAGATGATTGTGCATGCAACGCA AGATGCAGCGCTGCCAGCACCACAACAAACGATCAGCTGGCCTACTTTCAATCAGCGTGATCTTAGTCGTTATGCCACCT GGAACGGCTACATTGGCCTCTTTGCCGCCGACAACCTGAGCGGAAAATGGGCTGGCGTGTACGATCCAGCGCTCAACCAA GGCTTGATGTTGGTTGATCTTGATCCAAACTTGCCTGGGATTAAAACCTTTGCCTTTGGCGACCAATTTGATCGCAGCCT CTATACGACCGATGGCAGCGATTATGCCGAACTATGGCATGGTGCACAAGCCACATTTTGGGATTACCCAAGCCTAGCCG CAGGCCAAAGTCGTTCGTTCGAGGCCCATTGGCTGCCCTTGCACGATTTGGGCGATTTGAGTGCGGGCAATCGTTATGGC GCGGTTGGCTTGCAAATCAGCAGCAACGGCAATGTGAGCGTGGCAATTCAGCCAAGCCAAGCCTTCGTTGCAACGCCAAT TCGCATTAGCAAGGCAGGCCAAACGCTCTGGCAAGGCACGTTTGATCTCAAGCCGCAACAGCCACTACGGATTGAATTAA CCCAAAATATTACGCGTGGCGAGCTGCTTGCAATCGAATGGGCTGGGCAAACTCAGCAAATCGTTGTTCCTTAG
Upstream 100 bases:
>100_bases AGAGTTTTCAGATTTCTCAGGCCAACTTCAGCCGCAAACTATGGTTTTTGGCCCACCACAGCGCTATACTCACCATAGCT ATTTGATGTTGGAGGGATTT
Downstream 100 bases:
>100_bases CAAAAATCTGTTTTTAACAACCACGAAGTTTATTTTTTGATCCACGAAGGACACGAAGGTTAGGTTCTTAGCCACGAATT GCACGAATAAGCTATGCATC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 717; Mature: 717
Protein sequence:
>717_residues MFRRITLSFCLLIVSLSFVPQRPSYAAFTDGFADSAFRQRWQRADQAVAEGQTSRSWVWGQNIGPRIIERYQQSPQASRL VQYFDKARMEISQPAADRTSEWFATNGLLVVELISGQMQTGDQRFEPRTAANVPIAGDPASSSPTYASLAPIATTNGDHR SENRQGQRISSLLAANGQISDQPNLATANTTIVQYESVTGHNVPKVFFDFQQSLSTVTNVLGTFGYPITEAYWIDTTING QAQRVLFQAFERRVLTYNPNNSANWQVEMGNVGSHYYRWRYTTPMYYFQDSSIAAKVSEAGTLAINTEGYQPALVDSLPN DPIYPYKRIDRSKITGYQPKHYRLLKLENRYVTLTILPELGGRVYQLINKATGQNLLYQNPVIKASHLGQRGWWLAAGGI EWAAPTEEHGYLESEPWDYRLEQTNEAARVIVSTTERHTGIQIEITIELTNDSQIVNMRGNYRNPTASPQPFQFWMNAMI APGGINHLQRSLHFAVPTQQMIVHATQDAALPAPQQTISWPTFNQRDLSRYATWNGYIGLFAADNLSGKWAGVYDPALNQ GLMLVDLDPNLPGIKTFAFGDQFDRSLYTTDGSDYAELWHGAQATFWDYPSLAAGQSRSFEAHWLPLHDLGDLSAGNRYG AVGLQISSNGNVSVAIQPSQAFVATPIRISKAGQTLWQGTFDLKPQQPLRIELTQNITRGELLAIEWAGQTQQIVVP
Sequences:
>Translated_717_residues MFRRITLSFCLLIVSLSFVPQRPSYAAFTDGFADSAFRQRWQRADQAVAEGQTSRSWVWGQNIGPRIIERYQQSPQASRL VQYFDKARMEISQPAADRTSEWFATNGLLVVELISGQMQTGDQRFEPRTAANVPIAGDPASSSPTYASLAPIATTNGDHR SENRQGQRISSLLAANGQISDQPNLATANTTIVQYESVTGHNVPKVFFDFQQSLSTVTNVLGTFGYPITEAYWIDTTING QAQRVLFQAFERRVLTYNPNNSANWQVEMGNVGSHYYRWRYTTPMYYFQDSSIAAKVSEAGTLAINTEGYQPALVDSLPN DPIYPYKRIDRSKITGYQPKHYRLLKLENRYVTLTILPELGGRVYQLINKATGQNLLYQNPVIKASHLGQRGWWLAAGGI EWAAPTEEHGYLESEPWDYRLEQTNEAARVIVSTTERHTGIQIEITIELTNDSQIVNMRGNYRNPTASPQPFQFWMNAMI APGGINHLQRSLHFAVPTQQMIVHATQDAALPAPQQTISWPTFNQRDLSRYATWNGYIGLFAADNLSGKWAGVYDPALNQ GLMLVDLDPNLPGIKTFAFGDQFDRSLYTTDGSDYAELWHGAQATFWDYPSLAAGQSRSFEAHWLPLHDLGDLSAGNRYG AVGLQISSNGNVSVAIQPSQAFVATPIRISKAGQTLWQGTFDLKPQQPLRIELTQNITRGELLAIEWAGQTQQIVVP >Mature_717_residues MFRRITLSFCLLIVSLSFVPQRPSYAAFTDGFADSAFRQRWQRADQAVAEGQTSRSWVWGQNIGPRIIERYQQSPQASRL VQYFDKARMEISQPAADRTSEWFATNGLLVVELISGQMQTGDQRFEPRTAANVPIAGDPASSSPTYASLAPIATTNGDHR SENRQGQRISSLLAANGQISDQPNLATANTTIVQYESVTGHNVPKVFFDFQQSLSTVTNVLGTFGYPITEAYWIDTTING QAQRVLFQAFERRVLTYNPNNSANWQVEMGNVGSHYYRWRYTTPMYYFQDSSIAAKVSEAGTLAINTEGYQPALVDSLPN DPIYPYKRIDRSKITGYQPKHYRLLKLENRYVTLTILPELGGRVYQLINKATGQNLLYQNPVIKASHLGQRGWWLAAGGI EWAAPTEEHGYLESEPWDYRLEQTNEAARVIVSTTERHTGIQIEITIELTNDSQIVNMRGNYRNPTASPQPFQFWMNAMI APGGINHLQRSLHFAVPTQQMIVHATQDAALPAPQQTISWPTFNQRDLSRYATWNGYIGLFAADNLSGKWAGVYDPALNQ GLMLVDLDPNLPGIKTFAFGDQFDRSLYTTDGSDYAELWHGAQATFWDYPSLAAGQSRSFEAHWLPLHDLGDLSAGNRYG AVGLQISSNGNVSVAIQPSQAFVATPIRISKAGQTLWQGTFDLKPQQPLRIELTQNITRGELLAIEWAGQTQQIVVP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI87082126, Length=340, Percent_Identity=29.4117647058824, Blast_Score=98, Evalue=2e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013026 - InterPro: IPR011990 - InterPro: IPR019734 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 80228; Mature: 80228
Theoretical pI: Translated: 6.58; Mature: 6.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFRRITLSFCLLIVSLSFVPQRPSYAAFTDGFADSAFRQRWQRADQAVAEGQTSRSWVWG CCEEHHHHHHHHHHHHHHCCCCCCCCEECCCCHHHHHHHHHHHHHHHHHCCCCCCCEECC QNIGPRIIERYQQSPQASRLVQYFDKARMEISQPAADRTSEWFATNGLLVVELISGQMQT CCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHEECCCEEEEEEECCCCCC GDQRFEPRTAANVPIAGDPASSSPTYASLAPIATTNGDHRSENRQGQRISSLLAANGQIS CCCCCCCCCCCCCCCCCCCCCCCCCCEEECCEEECCCCCCCCCCHHHHHHHHHHCCCCCC DQPNLATANTTIVQYESVTGHNVPKVFFDFQQSLSTVTNVLGTFGYPITEAYWIDTTING CCCCEEECCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECC QAQRVLFQAFERRVLTYNPNNSANWQVEMGNVGSHYYRWRYTTPMYYFQDSSIAAKVSEA HHHHHHHHHHCCEEEEECCCCCCEEEEEECCCCCEEEEEEEECCEEEEECCCCEEEECCC GTLAINTEGYQPALVDSLPNDPIYPYKRIDRSKITGYQPKHYRLLKLENRYVTLTILPEL CEEEEECCCCCCHHHHCCCCCCCCCHHHCCCCCCCCCCCCCEEEEEECCCEEEEEEECCC GGRVYQLINKATGQNLLYQNPVIKASHLGQRGWWLAAGGIEWAAPTEEHGYLESEPWDYR CHHHHHHHHHHCCCCEEECCCCEEHHHCCCCCEEEEECCEEECCCCCCCCCCCCCCCCEE LEQTNEAARVIVSTTERHTGIQIEITIELTNDSQIVNMRGNYRNPTASPQPFQFWMNAMI ECCCCCEEEEEEEECCCCCCEEEEEEEEECCCCEEEEECCCCCCCCCCCCHHHHHHHHHC APGGINHLQRSLHFAVPTQQMIVHATQDAALPAPQQTISWPTFNQRDLSRYATWNGYIGL CCCCHHHHHHHHEECCCCHHEEEEECCCCCCCCCCHHCCCCCCCHHHHHHHEECCCEEEE FAADNLSGKWAGVYDPALNQGLMLVDLDPNLPGIKTFAFGDQFDRSLYTTDGSDYAELWH EEECCCCCCCCEEECHHHCCCEEEEECCCCCCCEEEEECCCCCCCEEEECCCCCHHHHHC GAQATFWDYPSLAAGQSRSFEAHWLPLHDLGDLSAGNRYGAVGLQISSNGNVSVAIQPSQ CCCCEEECCCCCCCCCCCCCEEEEEEHHCCCCCCCCCCCCEEEEEEECCCCEEEEEECCC AFVATPIRISKAGQTLWQGTFDLKPQQPLRIELTQNITRGELLAIEWAGQTQQIVVP CEEECCEEEECCCCHHHCCEECCCCCCCEEEEEECCCCCCEEEEEEECCCCCEEECC >Mature Secondary Structure MFRRITLSFCLLIVSLSFVPQRPSYAAFTDGFADSAFRQRWQRADQAVAEGQTSRSWVWG CCEEHHHHHHHHHHHHHHCCCCCCCCEECCCCHHHHHHHHHHHHHHHHHCCCCCCCEECC QNIGPRIIERYQQSPQASRLVQYFDKARMEISQPAADRTSEWFATNGLLVVELISGQMQT CCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHEECCCEEEEEEECCCCCC GDQRFEPRTAANVPIAGDPASSSPTYASLAPIATTNGDHRSENRQGQRISSLLAANGQIS CCCCCCCCCCCCCCCCCCCCCCCCCCEEECCEEECCCCCCCCCCHHHHHHHHHHCCCCCC DQPNLATANTTIVQYESVTGHNVPKVFFDFQQSLSTVTNVLGTFGYPITEAYWIDTTING CCCCEEECCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECC QAQRVLFQAFERRVLTYNPNNSANWQVEMGNVGSHYYRWRYTTPMYYFQDSSIAAKVSEA HHHHHHHHHHCCEEEEECCCCCCEEEEEECCCCCEEEEEEEECCEEEEECCCCEEEECCC GTLAINTEGYQPALVDSLPNDPIYPYKRIDRSKITGYQPKHYRLLKLENRYVTLTILPEL CEEEEECCCCCCHHHHCCCCCCCCCHHHCCCCCCCCCCCCCEEEEEECCCEEEEEEECCC GGRVYQLINKATGQNLLYQNPVIKASHLGQRGWWLAAGGIEWAAPTEEHGYLESEPWDYR CHHHHHHHHHHCCCCEEECCCCEEHHHCCCCCEEEEECCEEECCCCCCCCCCCCCCCCEE LEQTNEAARVIVSTTERHTGIQIEITIELTNDSQIVNMRGNYRNPTASPQPFQFWMNAMI ECCCCCEEEEEEEECCCCCCEEEEEEEEECCCCEEEEECCCCCCCCCCCCHHHHHHHHHC APGGINHLQRSLHFAVPTQQMIVHATQDAALPAPQQTISWPTFNQRDLSRYATWNGYIGL CCCCHHHHHHHHEECCCCHHEEEEECCCCCCCCCCHHCCCCCCCHHHHHHHEECCCEEEE FAADNLSGKWAGVYDPALNQGLMLVDLDPNLPGIKTFAFGDQFDRSLYTTDGSDYAELWH EEECCCCCCCCEEECHHHCCCEEEEECCCCCCCEEEEECCCCCCCEEEECCCCCHHHHHC GAQATFWDYPSLAAGQSRSFEAHWLPLHDLGDLSAGNRYGAVGLQISSNGNVSVAIQPSQ CCCCEEECCCCCCCCCCCCCEEEEEEHHCCCCCCCCCCCCEEEEEEECCCCEEEEEECCC AFVATPIRISKAGQTLWQGTFDLKPQQPLRIELTQNITRGELLAIEWAGQTQQIVVP CEEECCEEEECCCCHHHCCEECCCCCCCEEEEEECCCCCCEEEEEEECCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]