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The map label for this gene is spo0M [H]

Identifier: 159899671

GI number: 159899671

Start: 3980134

End: 3980898

Strand: Direct

Name: spo0M [H]

Synonym: Haur_3153

Alternate gene names: 159899671

Gene position: 3980134-3980898 (Clockwise)

Preceding gene: 159899670

Following gene: 159899673

Centisome position: 62.71

GC content: 48.1

Gene sequence:

>765_bases
ATGTTCCGTAAATTGCTCGCCAGCGTTGGTATTGGCAATGCTCGTATCGAAACCCATCTCCACAATAATACAACCGCTCC
AGGTGGCACGATCACTGGCGAAGTGCATATTATGGGCGGTGATGTCGAACAAGATATCGAGGCACTGTATTTGTTTTTGG
TCGCTCGCTATACCCGCGAGTACGACGATAGCAAAATAACCCAAGATCACACGATTGGGCAATATCCACTGACGCAGCGG
TTTCAGCTTCAACCAGGCGCTCAACAACGCATTCCCTTTAGCATTAATTTGCCGCTCGATACGCCCTTGACCATGGGCCA
TCAACCGGTCTTTATTCGCACTGGTTTATCGATCAGTGGCGGGGTCGATGCAGGTGATGTTGATCAATTGCAGATTCAGC
CGCATCCTTCGCAAGCAACGATTATTCAGGCCATCCAACAAATTGGCTTCCAACTTTATACCGTGCATAACGAATACAAT
TCACGCTGGCGCGGCCCCTATCCATTTGTGCAAGAGCTTGAATTCAAGCCTTATGGCCACCAAAGTTTCCATATCGAAGA
ATTAGAGGTTGTGCTCGATTTGCAAGATTATGGGGTCGATGTCTATTTGGAAATCGACAAGCGTTTGCATGGCTTTGCTA
AGCTGTTTGCCGATTTTGATCTCAACGAGCGTTACGCGAAGTTGACCTTTACCCATGCCGATATTCAACGCCCTGATTTG
GCCCATATCATCAGCCAAACCATCCAATCGCGCATGCGCCACTAA

Upstream 100 bases:

>100_bases
CATTGTGTGTTACAACATTGTCAAGATTAAATCGTGAAACCTTTTGATACTGTGTCTACGTATAACGCCTTAACAAATCG
ATCAACTTAGGAGGATGTGC

Downstream 100 bases:

>100_bases
TTCCCTCACCCCCTAGGCCTCTCATGTCAAGGGTAGGTTTTAACGTTCCCCACCTCCAACCCCTCTCCTACTGCGGCGGG
AGAGGGGACGGGGTGAGGGC

Product: SpoOM family protein

Products: NA

Alternate protein names: Stage 0 sporulation protein M [H]

Number of amino acids: Translated: 254; Mature: 254

Protein sequence:

>254_residues
MFRKLLASVGIGNARIETHLHNNTTAPGGTITGEVHIMGGDVEQDIEALYLFLVARYTREYDDSKITQDHTIGQYPLTQR
FQLQPGAQQRIPFSINLPLDTPLTMGHQPVFIRTGLSISGGVDAGDVDQLQIQPHPSQATIIQAIQQIGFQLYTVHNEYN
SRWRGPYPFVQELEFKPYGHQSFHIEELEVVLDLQDYGVDVYLEIDKRLHGFAKLFADFDLNERYAKLTFTHADIQRPDL
AHIISQTIQSRMRH

Sequences:

>Translated_254_residues
MFRKLLASVGIGNARIETHLHNNTTAPGGTITGEVHIMGGDVEQDIEALYLFLVARYTREYDDSKITQDHTIGQYPLTQR
FQLQPGAQQRIPFSINLPLDTPLTMGHQPVFIRTGLSISGGVDAGDVDQLQIQPHPSQATIIQAIQQIGFQLYTVHNEYN
SRWRGPYPFVQELEFKPYGHQSFHIEELEVVLDLQDYGVDVYLEIDKRLHGFAKLFADFDLNERYAKLTFTHADIQRPDL
AHIISQTIQSRMRH
>Mature_254_residues
MFRKLLASVGIGNARIETHLHNNTTAPGGTITGEVHIMGGDVEQDIEALYLFLVARYTREYDDSKITQDHTIGQYPLTQR
FQLQPGAQQRIPFSINLPLDTPLTMGHQPVFIRTGLSISGGVDAGDVDQLQIQPHPSQATIIQAIQQIGFQLYTVHNEYN
SRWRGPYPFVQELEFKPYGHQSFHIEELEVVLDLQDYGVDVYLEIDKRLHGFAKLFADFDLNERYAKLTFTHADIQRPDL
AHIISQTIQSRMRH

Specific function: Controls the expression of spo0A and is required to pass the morphological stage 0 of sporulation [H]

COG id: COG4326

COG function: function code R; Sporulation control protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the spo0M family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014756
- InterPro:   IPR009776 [H]

Pfam domain/function: PF07070 Spo0M [H]

EC number: NA

Molecular weight: Translated: 28982; Mature: 28982

Theoretical pI: Translated: 6.03; Mature: 6.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFRKLLASVGIGNARIETHLHNNTTAPGGTITGEVHIMGGDVEQDIEALYLFLVARYTRE
CHHHHHHHCCCCCEEEEEEECCCCCCCCCEEEEEEEEECCCHHHHHHHHHHHHHHHHHHH
YDDSKITQDHTIGQYPLTQRFQLQPGAQQRIPFSINLPLDTPLTMGHQPVFIRTGLSISG
CCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCEEEECCCCCCCCCCCCCEEEEECCEECC
GVDAGDVDQLQIQPHPSQATIIQAIQQIGFQLYTVHNEYNSRWRGPYPFVQELEFKPYGH
CCCCCCCCEEEECCCCCHHHHHHHHHHCCEEEEEEECCCCCCCCCCCCHHHHCCCCCCCC
QSFHIEELEVVLDLQDYGVDVYLEIDKRLHGFAKLFADFDLNERYAKLTFTHADIQRPDL
CCEEHEEEEEEEEHHHCCEEEEEEECHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCHH
AHIISQTIQSRMRH
HHHHHHHHHHHHCC
>Mature Secondary Structure
MFRKLLASVGIGNARIETHLHNNTTAPGGTITGEVHIMGGDVEQDIEALYLFLVARYTRE
CHHHHHHHCCCCCEEEEEEECCCCCCCCCEEEEEEEEECCCHHHHHHHHHHHHHHHHHHH
YDDSKITQDHTIGQYPLTQRFQLQPGAQQRIPFSINLPLDTPLTMGHQPVFIRTGLSISG
CCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCEEEECCCCCCCCCCCCCEEEEECCEECC
GVDAGDVDQLQIQPHPSQATIIQAIQQIGFQLYTVHNEYNSRWRGPYPFVQELEFKPYGH
CCCCCCCCEEEECCCCCHHHHHHHHHHCCEEEEEEECCCCCCCCCCCCHHHHCCCCCCCC
QSFHIEELEVVLDLQDYGVDVYLEIDKRLHGFAKLFADFDLNERYAKLTFTHADIQRPDL
CCEEHEEEEEEEEHHHCCEEEEEEECHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCHH
AHIISQTIQSRMRH
HHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9795118; 9202460; 9384377 [H]