Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
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Accession | NC_009972 |
Length | 6,346,587 |
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The map label for this gene is 159899663
Identifier: 159899663
GI number: 159899663
Start: 3972667
End: 3974553
Strand: Direct
Name: 159899663
Synonym: Haur_3145
Alternate gene names: NA
Gene position: 3972667-3974553 (Clockwise)
Preceding gene: 159899662
Following gene: 159899664
Centisome position: 62.6
GC content: 49.87
Gene sequence:
>1887_bases ATGGCGCAGTCAGCCCGGTGGCGTGGGTGGTTTTGGCTTGGTTTAGGCCTAATCTGCCTACTTTGGCCCAACCTAAGTCA TGCCCAAAATGCCGATGCCATCACCATCACTATCGATCAAGTTGGCTTTGATGCCCAAGGTCATGTAGCGAATGGTGGTT GGTATCCAATTATTACAACGATCGAAAATAGCGGAGCCGACCTTCAAGCCCAAGTTGTGGTTACCACAGGCTTTGGTCAG GCCGATTTGCTGCAAAATGTCGATTTACCTGGTGGTTCGCGCAAACAAGTGCGTTTACTCATGCGGGCCAATCTCAATCA AACCGTTGTCGAAATCAAAGTTATTGATGCTCAAGGCAAGCAGTTAGCCCGCAATCGCAGTAATGTGCGGGTACACGATA GCCAAGAAATTTTAGTAGGCGTATTTGGCGGGCCAGCCTCAAGTTTAGCTGGCGCTTCAGTTCCTGGCCGCCTCACCACG GTGATGCCGCTTGACCCAGCTCAACTGCCAAGCACCGATGGCGAATTGTTTAACTTTGCAGCAATCGTGCTCCAAGATGT TCAACCGACTGCCGAGCAGGCCGCCGCTCTCGAACGTTGGGTCGCAACTGGTGGAACATTGATCGTCAGCGGTGGCCCGA ATAGCGCCGAACTGCCCAAAGAACTAGCCTCACTCTTGCCTGCGAGTGTTAGCCGCAGCAATAGTTCGGCGGTGTTAACC ACGCTCAATGGGCGCAATACTCCCGCTTTTGCCCAAATCAACCTACGGGTTAACCAACTTCAACCAACCGCCGATGCTAG CATATTCGGCGTTGGGGCCAATAACGAAGCCTTAGTGATCAGTCGCAAGCTGGGCATGGGTCAAATCTTAGTCACAGCCT TCAATCCCAGTGACTTACCCGCCGAAGTTAATGATCGGTTGGTTTGGCCAGTGCTCTTACAACCCCAACTTTACCGCGAT TGGAATGTAGCGCTCTCGCCATGGTCAATCCAGATTCGCGGCACTGATCAAAATTTGCCTTCAGTTTTAGGCTTGATGGG AATTTTGTTTGGCTACATTCTGCTGATTGGCCCGATCAATTACTTTATTTTACGACGTTTGGATCGGCGGGAATGGGCTT GGTTTAGTATTCCATTGGTTGTACTTGGCTTTGTGGGTATTATGTATTTAGCTGGTGGCGATTTACGTACTGGCAATATC AATGTCACAACGATTAACATTATCGATAGCCAACTGGGAGCCGATCAAGGCCGTCTAAGCGTCAATTATGGCTTCAATGC AGGGCGACGCGGCGCATGGAATGGCAGTATTGATGCCAATTTAATTGCTGGCAACCAACCAATGCAAGGCTTTGGCGATG AGGGTTCGGGCACAATCGAGCAAACCAACGATGGCAAAACCCGCTTGCCCAATTGGCAAAGCAACATCGGCCAAATGCAA ACCCTCGCCGCGATTGGCTCAAGCGCAGTTCCCTACAATTTTGAGGTTAAAGTAGCCAAAGCCAATTCGTGGGAAGGTGC AACCATTACCAACCGGAGCGAACGCAAGGTTGAATATGCGATTCTGTTCAATGGCGAAGAAAGTATTATTTTGCCAGCAC TCGAACCAGGTGCTTCGATTACGATCGATAACAGCCTTGATCGCGTTATGCAAAGCAGCCCCTATCTCAACAACAACGAC CAATTAACCCAAGCCCTACAATTGCTCTGGAATGCTGGCAACGAACGCACCAACTACAGTGGACTGCCCAAAAATTCGCT GTATACCAAGCCGCATATCACGGTGCTTGATACCGAAGTGCTCAACGAAATTATGGTCGATGGGGTCGCCGCTCCGCAAA AGAGCAGCAATATCTATAATTTGTATGTTGATTTGGAGCAACGCTGA
Upstream 100 bases:
>100_bases ATCGCAGCCATATCGAAGCCAAATTGCCGCCAACCGAGCGGTTGGAAACTGGAGTGTAATCCTAATTGGGAGTCAGAATC TGTTGTGCGAAGGAGTTTTC
Downstream 100 bases:
>100_bases TGGAATTGATCGTTGAAACCCACAATTTAACCCAGCGTTTTGGCACACACCTAGCGCTCAATCAGGTCAATTTGAGCATT CCCAAAGGCGCGGTCTATGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 628; Mature: 627
Protein sequence:
>628_residues MAQSARWRGWFWLGLGLICLLWPNLSHAQNADAITITIDQVGFDAQGHVANGGWYPIITTIENSGADLQAQVVVTTGFGQ ADLLQNVDLPGGSRKQVRLLMRANLNQTVVEIKVIDAQGKQLARNRSNVRVHDSQEILVGVFGGPASSLAGASVPGRLTT VMPLDPAQLPSTDGELFNFAAIVLQDVQPTAEQAAALERWVATGGTLIVSGGPNSAELPKELASLLPASVSRSNSSAVLT TLNGRNTPAFAQINLRVNQLQPTADASIFGVGANNEALVISRKLGMGQILVTAFNPSDLPAEVNDRLVWPVLLQPQLYRD WNVALSPWSIQIRGTDQNLPSVLGLMGILFGYILLIGPINYFILRRLDRREWAWFSIPLVVLGFVGIMYLAGGDLRTGNI NVTTINIIDSQLGADQGRLSVNYGFNAGRRGAWNGSIDANLIAGNQPMQGFGDEGSGTIEQTNDGKTRLPNWQSNIGQMQ TLAAIGSSAVPYNFEVKVAKANSWEGATITNRSERKVEYAILFNGEESIILPALEPGASITIDNSLDRVMQSSPYLNNND QLTQALQLLWNAGNERTNYSGLPKNSLYTKPHITVLDTEVLNEIMVDGVAAPQKSSNIYNLYVDLEQR
Sequences:
>Translated_628_residues MAQSARWRGWFWLGLGLICLLWPNLSHAQNADAITITIDQVGFDAQGHVANGGWYPIITTIENSGADLQAQVVVTTGFGQ ADLLQNVDLPGGSRKQVRLLMRANLNQTVVEIKVIDAQGKQLARNRSNVRVHDSQEILVGVFGGPASSLAGASVPGRLTT VMPLDPAQLPSTDGELFNFAAIVLQDVQPTAEQAAALERWVATGGTLIVSGGPNSAELPKELASLLPASVSRSNSSAVLT TLNGRNTPAFAQINLRVNQLQPTADASIFGVGANNEALVISRKLGMGQILVTAFNPSDLPAEVNDRLVWPVLLQPQLYRD WNVALSPWSIQIRGTDQNLPSVLGLMGILFGYILLIGPINYFILRRLDRREWAWFSIPLVVLGFVGIMYLAGGDLRTGNI NVTTINIIDSQLGADQGRLSVNYGFNAGRRGAWNGSIDANLIAGNQPMQGFGDEGSGTIEQTNDGKTRLPNWQSNIGQMQ TLAAIGSSAVPYNFEVKVAKANSWEGATITNRSERKVEYAILFNGEESIILPALEPGASITIDNSLDRVMQSSPYLNNND QLTQALQLLWNAGNERTNYSGLPKNSLYTKPHITVLDTEVLNEIMVDGVAAPQKSSNIYNLYVDLEQR >Mature_627_residues AQSARWRGWFWLGLGLICLLWPNLSHAQNADAITITIDQVGFDAQGHVANGGWYPIITTIENSGADLQAQVVVTTGFGQA DLLQNVDLPGGSRKQVRLLMRANLNQTVVEIKVIDAQGKQLARNRSNVRVHDSQEILVGVFGGPASSLAGASVPGRLTTV MPLDPAQLPSTDGELFNFAAIVLQDVQPTAEQAAALERWVATGGTLIVSGGPNSAELPKELASLLPASVSRSNSSAVLTT LNGRNTPAFAQINLRVNQLQPTADASIFGVGANNEALVISRKLGMGQILVTAFNPSDLPAEVNDRLVWPVLLQPQLYRDW NVALSPWSIQIRGTDQNLPSVLGLMGILFGYILLIGPINYFILRRLDRREWAWFSIPLVVLGFVGIMYLAGGDLRTGNIN VTTINIIDSQLGADQGRLSVNYGFNAGRRGAWNGSIDANLIAGNQPMQGFGDEGSGTIEQTNDGKTRLPNWQSNIGQMQT LAAIGSSAVPYNFEVKVAKANSWEGATITNRSERKVEYAILFNGEESIILPALEPGASITIDNSLDRVMQSSPYLNNNDQ LTQALQLLWNAGNERTNYSGLPKNSLYTKPHITVLDTEVLNEIMVDGVAAPQKSSNIYNLYVDLEQR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 67930; Mature: 67799
Theoretical pI: Translated: 4.89; Mature: 4.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAQSARWRGWFWLGLGLICLLWPNLSHAQNADAITITIDQVGFDAQGHVANGGWYPIITT CCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCCCCEEECCCEEEEEEE IENSGADLQAQVVVTTGFGQADLLQNVDLPGGSRKQVRLLMRANLNQTVVEIKVIDAQGK EECCCCCEEEEEEEEECCCCHHHHHCCCCCCCCHHHEEEEECCCCCCEEEEEEEECCCCH QLARNRSNVRVHDSQEILVGVFGGPASSLAGASVPGRLTTVMPLDPAQLPSTDGELFNFA HHHCCCCCEEEECCCEEEEEEECCCHHHCCCCCCCCCEEEEEECCCCCCCCCCCHHHHEE AIVLQDVQPTAEQAAALERWVATGGTLIVSGGPNSAELPKELASLLPASVSRSNSSAVLT EHHHCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHCCHHCCCCCCCEEEE TLNGRNTPAFAQINLRVNQLQPTADASIFGVGANNEALVISRKLGMGQILVTAFNPSDLP EECCCCCCEEEEEEEEEEECCCCCCCEEEEECCCCCEEEEEECCCCCEEEEEEECCCCCC AEVNDRLVWPVLLQPQLYRDWNVALSPWSIQIRGTDQNLPSVLGLMGILFGYILLIGPIN CCCCCEEEEEEECCCEECCCCCEEECCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHH YFILRRLDRREWAWFSIPLVVLGFVGIMYLAGGDLRTGNINVTTINIIDSQLGADQGRLS HHHHHHHCCCCEEEEEHHHHHHHHHHHHHHCCCCEEECEEEEEEEEEEECCCCCCCCEEE VNYGFNAGRRGAWNGSIDANLIAGNQPMQGFGDEGSGTIEQTNDGKTRLPNWQSNIGQMQ EEECCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCEEECCCCCCCCCCHHHHHHHHH TLAAIGSSAVPYNFEVKVAKANSWEGATITNRSERKVEYAILFNGEESIILPALEPGASI HHHHHCCCCCCEEEEEEEEECCCCCCCEECCCCCCEEEEEEEECCCCCEEEEECCCCCEE TIDNSLDRVMQSSPYLNNNDQLTQALQLLWNAGNERTNYSGLPKNSLYTKPHITVLDTEV EECCHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEECHHH LNEIMVDGVAAPQKSSNIYNLYVDLEQR HHHHHHCCCCCCCCCCCEEEEEEEEECC >Mature Secondary Structure AQSARWRGWFWLGLGLICLLWPNLSHAQNADAITITIDQVGFDAQGHVANGGWYPIITT CCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCCCCEEECCCEEEEEEE IENSGADLQAQVVVTTGFGQADLLQNVDLPGGSRKQVRLLMRANLNQTVVEIKVIDAQGK EECCCCCEEEEEEEEECCCCHHHHHCCCCCCCCHHHEEEEECCCCCCEEEEEEEECCCCH QLARNRSNVRVHDSQEILVGVFGGPASSLAGASVPGRLTTVMPLDPAQLPSTDGELFNFA HHHCCCCCEEEECCCEEEEEEECCCHHHCCCCCCCCCEEEEEECCCCCCCCCCCHHHHEE AIVLQDVQPTAEQAAALERWVATGGTLIVSGGPNSAELPKELASLLPASVSRSNSSAVLT EHHHCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHCCHHCCCCCCCEEEE TLNGRNTPAFAQINLRVNQLQPTADASIFGVGANNEALVISRKLGMGQILVTAFNPSDLP EECCCCCCEEEEEEEEEEECCCCCCCEEEEECCCCCEEEEEECCCCCEEEEEEECCCCCC AEVNDRLVWPVLLQPQLYRDWNVALSPWSIQIRGTDQNLPSVLGLMGILFGYILLIGPIN CCCCCEEEEEEECCCEECCCCCEEECCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHH YFILRRLDRREWAWFSIPLVVLGFVGIMYLAGGDLRTGNINVTTINIIDSQLGADQGRLS HHHHHHHCCCCEEEEEHHHHHHHHHHHHHHCCCCEEECEEEEEEEEEEECCCCCCCCEEE VNYGFNAGRRGAWNGSIDANLIAGNQPMQGFGDEGSGTIEQTNDGKTRLPNWQSNIGQMQ EEECCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCEEECCCCCCCCCCHHHHHHHHH TLAAIGSSAVPYNFEVKVAKANSWEGATITNRSERKVEYAILFNGEESIILPALEPGASI HHHHHCCCCCCEEEEEEEEECCCCCCCEECCCCCCEEEEEEEECCCCCEEEEECCCCCEE TIDNSLDRVMQSSPYLNNNDQLTQALQLLWNAGNERTNYSGLPKNSLYTKPHITVLDTEV EECCHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEECHHH LNEIMVDGVAAPQKSSNIYNLYVDLEQR HHHHHHCCCCCCCCCCCEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA