Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
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Accession | NC_009972 |
Length | 6,346,587 |
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The map label for this gene is 159899662
Identifier: 159899662
GI number: 159899662
Start: 3971342
End: 3972625
Strand: Direct
Name: 159899662
Synonym: Haur_3144
Alternate gene names: NA
Gene position: 3971342-3972625 (Clockwise)
Preceding gene: 159899661
Following gene: 159899663
Centisome position: 62.57
GC content: 46.42
Gene sequence:
>1284_bases ATGCCAACCAACGTGCCTCAACTCAGTTTTAATATCAATCTCCAAGCTGATGAACGGGTCAAGTTGATCGCCTATCGCCA TTGGCTAATCTTGGCACGCAATCTGTCAATTTGGTTTACCTTTTGGTTTATTTGTACCGTGATTTTCTTGTGGCGGGTCT CGGTGGTTGGCGTTGATACCCTGAATACTGTGCTGTTTGGCGCTGGTACGATCTTTTTCGGGGCCATGATTTATAGCTAT TTCGATTGGCGCAATGATGCCTTGGTCGTTACCAATCAGCGGGTTATTTCGTATAACTCGCGTTTTTTGATCAGCGTGCA GCGCAATGAGCTGTATGTGCGCGAAATTGAAGATGTAAAAACCGTCACCGAGTCGGTGGTTTCACGCTATTTCGATTATG GCGAAATTGAAGTCCAAACTGCCAGCCGTTTGCGCAACATTGCCTTCGTGGGAATCGTCAATCCTACGTTGGTACGTGAC ACAATTCTCGAATTTGTTGCGCCGCTCAAAGAAGTTGAGCATGTTGAGCATATTCAGCAAATCGTCAGAGCCAAAGTGCT CAAACAAGGCACAATGCCAAGCTTGCCACCATTGAGCGATTTTATTCCACCAGAACAAACTGGCCGTACACTTTTGGGCA TTATTCCGCCAAGCCCCGAGGTGCGCGGCAATTCGATTATTTGGCGCAAACATTGGCTTTTTCTCTTTGTCGAGGCAGCT AACCCAATTTTGCTGTTTCTAATTATCAATTTGTCGTGGTCACTGTTGCTCGGCTACGATTTTATTCGGTCTGGTGGCTC GTTAGTATTTTTGGCAATCCTCGATATCTTTTGTCTCGGCTGGCTGATTTACGAGGTGATTGATTGGCGCAACGATGAAT ATATTGTCACCCCAATCAACATTATTGATATTGAGCGCAAGCCCTTGGGCCGTGAAACCAAACGGGAAACAACCTGGGAC AAAATTCAGAATGTTTCGCTGAATCAAGAAAATTTATGGGCACGCATTTTGAAATACGGCGATGTCGAGCTATTTACCGC AGGTCAAAACGAAAATTTCACCTTTCGCGGGGTAGCCGCACCCGATAGCGTGTTGGCAGTCATTTCGGATTATCGCGACC AATTTGAGCAGCGGGCGCGTGACCGTGAATTTGATAGCACCTTAATGCTGTTGCAACATTATCACCAACTACAACGCGAT GAACTCCAAGTGCTGTTTGATGATCATCGCAGCCATATCGAAGCCAAATTGCCGCCAACCGAGCGGTTGGAAACTGGAGT GTAA
Upstream 100 bases:
>100_bases ATTTGGCTGAGCAAATTATGGCCCAAGTTGCAGCTCTATTACCGCAGGCCTATGGCGGCACGAATGTTAGCCAACTCAGC TATGAATAGGATGGGATGTT
Downstream 100 bases:
>100_bases TCCTAATTGGGAGTCAGAATCTGTTGTGCGAAGGAGTTTTCATGGCGCAGTCAGCCCGGTGGCGTGGGTGGTTTTGGCTT GGTTTAGGCCTAATCTGCCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 427; Mature: 426
Protein sequence:
>427_residues MPTNVPQLSFNINLQADERVKLIAYRHWLILARNLSIWFTFWFICTVIFLWRVSVVGVDTLNTVLFGAGTIFFGAMIYSY FDWRNDALVVTNQRVISYNSRFLISVQRNELYVREIEDVKTVTESVVSRYFDYGEIEVQTASRLRNIAFVGIVNPTLVRD TILEFVAPLKEVEHVEHIQQIVRAKVLKQGTMPSLPPLSDFIPPEQTGRTLLGIIPPSPEVRGNSIIWRKHWLFLFVEAA NPILLFLIINLSWSLLLGYDFIRSGGSLVFLAILDIFCLGWLIYEVIDWRNDEYIVTPINIIDIERKPLGRETKRETTWD KIQNVSLNQENLWARILKYGDVELFTAGQNENFTFRGVAAPDSVLAVISDYRDQFEQRARDREFDSTLMLLQHYHQLQRD ELQVLFDDHRSHIEAKLPPTERLETGV
Sequences:
>Translated_427_residues MPTNVPQLSFNINLQADERVKLIAYRHWLILARNLSIWFTFWFICTVIFLWRVSVVGVDTLNTVLFGAGTIFFGAMIYSY FDWRNDALVVTNQRVISYNSRFLISVQRNELYVREIEDVKTVTESVVSRYFDYGEIEVQTASRLRNIAFVGIVNPTLVRD TILEFVAPLKEVEHVEHIQQIVRAKVLKQGTMPSLPPLSDFIPPEQTGRTLLGIIPPSPEVRGNSIIWRKHWLFLFVEAA NPILLFLIINLSWSLLLGYDFIRSGGSLVFLAILDIFCLGWLIYEVIDWRNDEYIVTPINIIDIERKPLGRETKRETTWD KIQNVSLNQENLWARILKYGDVELFTAGQNENFTFRGVAAPDSVLAVISDYRDQFEQRARDREFDSTLMLLQHYHQLQRD ELQVLFDDHRSHIEAKLPPTERLETGV >Mature_426_residues PTNVPQLSFNINLQADERVKLIAYRHWLILARNLSIWFTFWFICTVIFLWRVSVVGVDTLNTVLFGAGTIFFGAMIYSYF DWRNDALVVTNQRVISYNSRFLISVQRNELYVREIEDVKTVTESVVSRYFDYGEIEVQTASRLRNIAFVGIVNPTLVRDT ILEFVAPLKEVEHVEHIQQIVRAKVLKQGTMPSLPPLSDFIPPEQTGRTLLGIIPPSPEVRGNSIIWRKHWLFLFVEAAN PILLFLIINLSWSLLLGYDFIRSGGSLVFLAILDIFCLGWLIYEVIDWRNDEYIVTPINIIDIERKPLGRETKRETTWDK IQNVSLNQENLWARILKYGDVELFTAGQNENFTFRGVAAPDSVLAVISDYRDQFEQRARDREFDSTLMLLQHYHQLQRDE LQVLFDDHRSHIEAKLPPTERLETGV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49654; Mature: 49523
Theoretical pI: Translated: 5.48; Mature: 5.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTNVPQLSFNINLQADERVKLIAYRHWLILARNLSIWFTFWFICTVIFLWRVSVVGVDT CCCCCCEEEEEEEECCCCCEEEHHHHEEHHHCCCHHHHHHHHHHHHHHHHHHHHHHCHHH LNTVLFGAGTIFFGAMIYSYFDWRNDALVVTNQRVISYNSRFLISVQRNELYVREIEDVK HHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCEEEEECCEEEEEEECCCEEEHHHHHHH TVTESVVSRYFDYGEIEVQTASRLRNIAFVGIVNPTLVRDTILEFVAPLKEVEHVEHIQQ HHHHHHHHHHCCCCEEEEEHHHHHHCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHH IVRAKVLKQGTMPSLPPLSDFIPPEQTGRTLLGIIPPSPEVRGNSIIWRKHWLFLFVEAA HHHHHHHHCCCCCCCCCCHHCCCCCCCCCEEEEEECCCCCCCCCEEEEEEEEEEEEEECC NPILLFLIINLSWSLLLGYDFIRSGGSLVFLAILDIFCLGWLIYEVIDWRNDEYIVTPIN CCEEEEEEHHCHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHCCCCCCEEEECEE IIDIERKPLGRETKRETTWDKIQNVSLNQENLWARILKYGDVELFTAGQNENFTFRGVAA EEEECCCCCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHCCCEEEEECCCCCCEEEEEECC PDSVLAVISDYRDQFEQRARDREFDSTLMLLQHYHQLQRDELQVLFDDHRSHIEAKLPPT CHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCH ERLETGV HHHCCCC >Mature Secondary Structure PTNVPQLSFNINLQADERVKLIAYRHWLILARNLSIWFTFWFICTVIFLWRVSVVGVDT CCCCCEEEEEEEECCCCCEEEHHHHEEHHHCCCHHHHHHHHHHHHHHHHHHHHHHCHHH LNTVLFGAGTIFFGAMIYSYFDWRNDALVVTNQRVISYNSRFLISVQRNELYVREIEDVK HHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCEEEEECCEEEEEEECCCEEEHHHHHHH TVTESVVSRYFDYGEIEVQTASRLRNIAFVGIVNPTLVRDTILEFVAPLKEVEHVEHIQQ HHHHHHHHHHCCCCEEEEEHHHHHHCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHH IVRAKVLKQGTMPSLPPLSDFIPPEQTGRTLLGIIPPSPEVRGNSIIWRKHWLFLFVEAA HHHHHHHHCCCCCCCCCCHHCCCCCCCCCEEEEEECCCCCCCCCEEEEEEEEEEEEEECC NPILLFLIINLSWSLLLGYDFIRSGGSLVFLAILDIFCLGWLIYEVIDWRNDEYIVTPIN CCEEEEEEHHCHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHCCCCCCEEEECEE IIDIERKPLGRETKRETTWDKIQNVSLNQENLWARILKYGDVELFTAGQNENFTFRGVAA EEEECCCCCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHCCCEEEEECCCCCCEEEEEECC PDSVLAVISDYRDQFEQRARDREFDSTLMLLQHYHQLQRDELQVLFDDHRSHIEAKLPPT CHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCH ERLETGV HHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA