Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
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Accession | NC_009972 |
Length | 6,346,587 |
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The map label for this gene is 159899637
Identifier: 159899637
GI number: 159899637
Start: 3935031
End: 3937112
Strand: Direct
Name: 159899637
Synonym: Haur_3118
Alternate gene names: NA
Gene position: 3935031-3937112 (Clockwise)
Preceding gene: 159899636
Following gene: 159899638
Centisome position: 62.0
GC content: 51.63
Gene sequence:
>2082_bases ATGGTGGCTCCTTCTGCGCTTGCGTTAATTTTACCGGCGGGTATGCCATTGGCAACCGCGTTAATGATCGTCAATCAACG CCAAATCGATTGGGTGGTGATCACGCCTACGCCCAACCCCAAAGAGGGCGATGCAGCGACGCTGATTGCTGTAGCTGAGC TGAAACAAAGCAATGTTTCGGTCGTTGGGGCATTGGCTGGCCTAACCGTTACGATCACACGAATCTTTCCGGATCGCACG GTGCATTGGCAAAGCGAAGCGATCACAACCAAACAAAATGATGATCGGCGTGGCGATAACGAAGGCATTGAGCCAGAGCC AACTACGCCACGGGTGGTTAATGCAGCGCTGTATTATGCCGATGATCCCCCCGACCTTGTGCCACCAACCACAACCTTGG CAGTAGCAAGCCGTTACCATTTGCGGATTAATATCGGTGAACGGCGGAGCGATTCGCGCTTAACTGATGCCCAAGCCTTG CCAACCCCCGAAATAAGCGAAGATTTACCCTTATTTATCAGCGTTTCAAGTCGTGGCGAATATATGGTGTTTGATGCGCC GATGCAGCGCCTGAGTTTGCCGCCTGTTGGCGATAGTGCCAGCTTGCAATTTAGCCTAACTGCCAAACAGGCAATTGATG ATATTCCAATTTGGATCAATGTTTATTACAACTGGACCTTGCTGCAAACGCTTGAATTGCATTTCAAAATTACGCCCGTC GAAGGCGATTTGGCTGCGCCCTTGTTAGCGCGGGTCAGCTATTCGCGCACCGCTGGCTTTGCTGATTTAGTGGCAATTCG CCCCAAAAAAATTACTTGTAAATTAACTGGCGATGGCGAATTTTATCGTATGAGCGTGGCGTGGCCCGATGAAGGTACGA GCACCCGTCGCGAACAACGTGGCTTGAATTTGGTGCTGCCAATCAATGCCGCCAGCTTGAGCAACGAAATTGTCCAAGCG CGAAACACGCTCTACGATATTACCTGGCAACCATCGTATCGCCAAGGCAGCCGTGGCAAGTTGGCCGAGCGCCGCGAAAG TTTGTATCAACTAGCGGTTGTGGGTAATCGCTTGTATGCTGCTTTGTTTGCGCCCAGTGGAGCCAGCGCCGAGCAAGCTG AATCGTTGGCGGCACTGCGAACATGGCTTGAAACAATTAGCGCCGATCAGACCTTGCCAGCCTTGCAAATTATCCACGAA GGCATGCCCAGCGGTGTGCCATGGGGCTTGCTTTACCCTGAGCCAGTCAACGATCCCAACAACGTTGATCTGAACAAATT CTGGGGTTGTCGTTATCGTTTGGAAATTATGACCCCGCAACTGGCCCAAAATGCGCAGCAAGCGCCAACTGCCCAAGCCC AATTGCAGATTAGCGGCGGAACCTACAACTTCCGCGTGCCAATCGCCGATACAGTCGTTGATGTGACTCAACAACATCGT GAAGCGCTGCAAACGTGGAGCACAACCCGGGGCAATGTGGCGCTCGATTTACGCGAATCAGGCGATAAAAATAGCCTTGG CGGCTTATTCGGTAAAAGCGATATTGTCTATATGTATTGCCATGGCCACACCGCCAAAACTCCCGACGATACCTCAGATT GGCTAGCCAAGTTTCGTGATCAAATGGCGCGTTTGGATGATAACGTGCGCAGCAACTATAGCGATTTGCTCAGTTTGAGC CAGAAAGAATATCAACCAAGCGACCCAAATATTAGCGATAGCTGGCTGAAATGGAATCAAAGCCTGTTGCCGTTGCGCTT GCTGAGCCAGTGGGGATTAAAACTCGAACGCAAACCGTTGGTCATTTTGAATATGTGTGAATCGGCCCAAGTGCTGCCAA CCTTGAGTAGCGGCTTTATTCCATTTTTCAGCCAATTGGGGGCGCGAGGCATTTTAGGCACCGAATGCCCAATGCTCGCA CCATTTGCCGCCGCCTTTGGCCAAAAACTGATCGAACGCTTGGGACAGGGCGAGGCGATTGGCGATATTTTGCCAGCGCT ACGCCGCCATTTTATCGAAGAAGAGCGCAATCCCTTGGGCTTGGCCTACACTTACTATGGCGATGCCGATGCCCATGTTT AG
Upstream 100 bases:
>100_bases CAGATGGTCTATGGGTTTCTGTGGATTTAGCCTGTTGACAAGCCATGAAGCTGCTACGTACAATGGAGCCATCACTTGGT ACTGCTAGGAGGGTACTTCG
Downstream 100 bases:
>100_bases GAGTGTGACGTTGGGGCTGTGCGATAACCTTTATCAGCAGCCAAGCATCATTGAGTTATTTTAAGGAGTTGCTGTGAGCG ATTCAACCAATCAACAAGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 693; Mature: 693
Protein sequence:
>693_residues MVAPSALALILPAGMPLATALMIVNQRQIDWVVITPTPNPKEGDAATLIAVAELKQSNVSVVGALAGLTVTITRIFPDRT VHWQSEAITTKQNDDRRGDNEGIEPEPTTPRVVNAALYYADDPPDLVPPTTTLAVASRYHLRINIGERRSDSRLTDAQAL PTPEISEDLPLFISVSSRGEYMVFDAPMQRLSLPPVGDSASLQFSLTAKQAIDDIPIWINVYYNWTLLQTLELHFKITPV EGDLAAPLLARVSYSRTAGFADLVAIRPKKITCKLTGDGEFYRMSVAWPDEGTSTRREQRGLNLVLPINAASLSNEIVQA RNTLYDITWQPSYRQGSRGKLAERRESLYQLAVVGNRLYAALFAPSGASAEQAESLAALRTWLETISADQTLPALQIIHE GMPSGVPWGLLYPEPVNDPNNVDLNKFWGCRYRLEIMTPQLAQNAQQAPTAQAQLQISGGTYNFRVPIADTVVDVTQQHR EALQTWSTTRGNVALDLRESGDKNSLGGLFGKSDIVYMYCHGHTAKTPDDTSDWLAKFRDQMARLDDNVRSNYSDLLSLS QKEYQPSDPNISDSWLKWNQSLLPLRLLSQWGLKLERKPLVILNMCESAQVLPTLSSGFIPFFSQLGARGILGTECPMLA PFAAAFGQKLIERLGQGEAIGDILPALRRHFIEEERNPLGLAYTYYGDADAHV
Sequences:
>Translated_693_residues MVAPSALALILPAGMPLATALMIVNQRQIDWVVITPTPNPKEGDAATLIAVAELKQSNVSVVGALAGLTVTITRIFPDRT VHWQSEAITTKQNDDRRGDNEGIEPEPTTPRVVNAALYYADDPPDLVPPTTTLAVASRYHLRINIGERRSDSRLTDAQAL PTPEISEDLPLFISVSSRGEYMVFDAPMQRLSLPPVGDSASLQFSLTAKQAIDDIPIWINVYYNWTLLQTLELHFKITPV EGDLAAPLLARVSYSRTAGFADLVAIRPKKITCKLTGDGEFYRMSVAWPDEGTSTRREQRGLNLVLPINAASLSNEIVQA RNTLYDITWQPSYRQGSRGKLAERRESLYQLAVVGNRLYAALFAPSGASAEQAESLAALRTWLETISADQTLPALQIIHE GMPSGVPWGLLYPEPVNDPNNVDLNKFWGCRYRLEIMTPQLAQNAQQAPTAQAQLQISGGTYNFRVPIADTVVDVTQQHR EALQTWSTTRGNVALDLRESGDKNSLGGLFGKSDIVYMYCHGHTAKTPDDTSDWLAKFRDQMARLDDNVRSNYSDLLSLS QKEYQPSDPNISDSWLKWNQSLLPLRLLSQWGLKLERKPLVILNMCESAQVLPTLSSGFIPFFSQLGARGILGTECPMLA PFAAAFGQKLIERLGQGEAIGDILPALRRHFIEEERNPLGLAYTYYGDADAHV >Mature_693_residues MVAPSALALILPAGMPLATALMIVNQRQIDWVVITPTPNPKEGDAATLIAVAELKQSNVSVVGALAGLTVTITRIFPDRT VHWQSEAITTKQNDDRRGDNEGIEPEPTTPRVVNAALYYADDPPDLVPPTTTLAVASRYHLRINIGERRSDSRLTDAQAL PTPEISEDLPLFISVSSRGEYMVFDAPMQRLSLPPVGDSASLQFSLTAKQAIDDIPIWINVYYNWTLLQTLELHFKITPV EGDLAAPLLARVSYSRTAGFADLVAIRPKKITCKLTGDGEFYRMSVAWPDEGTSTRREQRGLNLVLPINAASLSNEIVQA RNTLYDITWQPSYRQGSRGKLAERRESLYQLAVVGNRLYAALFAPSGASAEQAESLAALRTWLETISADQTLPALQIIHE GMPSGVPWGLLYPEPVNDPNNVDLNKFWGCRYRLEIMTPQLAQNAQQAPTAQAQLQISGGTYNFRVPIADTVVDVTQQHR EALQTWSTTRGNVALDLRESGDKNSLGGLFGKSDIVYMYCHGHTAKTPDDTSDWLAKFRDQMARLDDNVRSNYSDLLSLS QKEYQPSDPNISDSWLKWNQSLLPLRLLSQWGLKLERKPLVILNMCESAQVLPTLSSGFIPFFSQLGARGILGTECPMLA PFAAAFGQKLIERLGQGEAIGDILPALRRHFIEEERNPLGLAYTYYGDADAHV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 76580; Mature: 76580
Theoretical pI: Translated: 5.12; Mature: 5.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVAPSALALILPAGMPLATALMIVNQRQIDWVVITPTPNPKEGDAATLIAVAELKQSNVS CCCCCCCCEEECCCCHHHHHHHHCCCCCCCEEEECCCCCCCCCCCEEEEEEEHHCCCCCE VVGALAGLTVTITRIFPDRTVHWQSEAITTKQNDDRRGDNEGIEPEPTTPRVVNAALYYA EEEEHHCCEEEEEEECCCCEEEECCCEECCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEE DDPPDLVPPTTTLAVASRYHLRINIGERRSDSRLTDAQALPTPEISEDLPLFISVSSRGE CCCCCCCCCCHHEEEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCC YMVFDAPMQRLSLPPVGDSASLQFSLTAKQAIDDIPIWINVYYNWTLLQTLELHFKITPV EEEECCCHHHCCCCCCCCCCCEEEEEEHHHHCCCCCEEEEEEEEEEEEEEEEEEEEEECC EGDLAAPLLARVSYSRTAGFADLVAIRPKKITCKLTGDGEFYRMSVAWPDEGTSTRREQR CCCHHHHHHHHHHHHHCCCCCCEEEECCCEEEEEEECCCCEEEEEEECCCCCCCCHHHHC GLNLVLPINAASLSNEIVQARNTLYDITWQPSYRQGSRGKLAERRESLYQLAVVGNRLYA CCEEEEECCHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCEEEE ALFAPSGASAEQAESLAALRTWLETISADQTLPALQIIHEGMPSGVPWGLLYPEPVNDPN EEECCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCC NVDLNKFWGCRYRLEIMTPQLAQNAQQAPTAQAQLQISGGTYNFRVPIADTVVDVTQQHR CCCHHHCCCCEEEEEECCCHHHHHHHHCCCCEEEEEEECCEEEEEECHHHHHHHHHHHHH EALQTWSTTRGNVALDLRESGDKNSLGGLFGKSDIVYMYCHGHTAKTPDDTSDWLAKFRD HHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHH QMARLDDNVRSNYSDLLSLSQKEYQPSDPNISDSWLKWNQSLLPLRLLSQWGLKLERKPL HHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCHHHHHHHHCCCEECCCCE VILNMCESAQVLPTLSSGFIPFFSQLGARGILGTECPMLAPFAAAFGQKLIERLGQGEAI EEEEECCCCCCCCCHHCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHH GDILPALRRHFIEEERNPLGLAYTYYGDADAHV HHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCC >Mature Secondary Structure MVAPSALALILPAGMPLATALMIVNQRQIDWVVITPTPNPKEGDAATLIAVAELKQSNVS CCCCCCCCEEECCCCHHHHHHHHCCCCCCCEEEECCCCCCCCCCCEEEEEEEHHCCCCCE VVGALAGLTVTITRIFPDRTVHWQSEAITTKQNDDRRGDNEGIEPEPTTPRVVNAALYYA EEEEHHCCEEEEEEECCCCEEEECCCEECCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEE DDPPDLVPPTTTLAVASRYHLRINIGERRSDSRLTDAQALPTPEISEDLPLFISVSSRGE CCCCCCCCCCHHEEEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCC YMVFDAPMQRLSLPPVGDSASLQFSLTAKQAIDDIPIWINVYYNWTLLQTLELHFKITPV EEEECCCHHHCCCCCCCCCCCEEEEEEHHHHCCCCCEEEEEEEEEEEEEEEEEEEEEECC EGDLAAPLLARVSYSRTAGFADLVAIRPKKITCKLTGDGEFYRMSVAWPDEGTSTRREQR CCCHHHHHHHHHHHHHCCCCCCEEEECCCEEEEEEECCCCEEEEEEECCCCCCCCHHHHC GLNLVLPINAASLSNEIVQARNTLYDITWQPSYRQGSRGKLAERRESLYQLAVVGNRLYA CCEEEEECCHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCEEEE ALFAPSGASAEQAESLAALRTWLETISADQTLPALQIIHEGMPSGVPWGLLYPEPVNDPN EEECCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCC NVDLNKFWGCRYRLEIMTPQLAQNAQQAPTAQAQLQISGGTYNFRVPIADTVVDVTQQHR CCCHHHCCCCEEEEEECCCHHHHHHHHCCCCEEEEEEECCEEEEEECHHHHHHHHHHHHH EALQTWSTTRGNVALDLRESGDKNSLGGLFGKSDIVYMYCHGHTAKTPDDTSDWLAKFRD HHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHH QMARLDDNVRSNYSDLLSLSQKEYQPSDPNISDSWLKWNQSLLPLRLLSQWGLKLERKPL HHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCHHHHHHHHCCCEECCCCE VILNMCESAQVLPTLSSGFIPFFSQLGARGILGTECPMLAPFAAAFGQKLIERLGQGEAI EEEEECCCCCCCCCHHCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHH GDILPALRRHFIEEERNPLGLAYTYYGDADAHV HHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA