Click here to switch to the map view.

The map label for this gene is cysS [H]

Identifier: 159899627

GI number: 159899627

Start: 3921346

End: 3922746

Strand: Direct

Name: cysS [H]

Synonym: Haur_3108

Alternate gene names: 159899627

Gene position: 3921346-3922746 (Clockwise)

Preceding gene: 159899626

Following gene: 159899628

Centisome position: 61.79

GC content: 51.46

Gene sequence:

>1401_bases
ATGGCATTAGCAATTTACAACACGCTTACCCGCCAGACCGAGCCGTTTACACCGTTGGTTGCTGACCATGTGTCGATGTA
TGTCTGTGGGCCGACGGTGTATTCTGATGCCCATATTGGTCATGCCATGTCAGCGGTGGTGTTCGATGTGGTGCGGCGCT
ATTTGGAATGGTCGGGCTATACGGTGCGCCATGTGATGAATTTTACCGATGTTGATGATAAAATTATTCGCCGCGCCAAC
GAGCAAGGCCGTGATCCCATGGAATTGGCCGAGAGCTATACCTTGGCCTTTCTTGATCAATTGGGCCAATTGAATGTGCT
GCCCGCTACGGCCTACCCCCGCGTTTCAACCACGATTCCGCAAATTATTCAATTTATCGAAGGCTTGATTGCCAAAGATG
CGGCATACCACGCCAGCAATGGCGATGTCTATTTTCGGGTACGAGCCGACGAAGATTATGGCAAACTTTCGCGCCGCGCT
GTCGATGATATGCGCTCTGGTGCGCGAATTGCTCCCGATGAAGCCAAAGATGACCCGTTAGATTTTGCGCTGTGGAAATC
GGCCAAACCAGGCGAGCCAGCTTGGGAAAGCCCATGGGGTCAAGGCCGACCTGGTTGGCATATCGAATGCTCGGCCATGA
GTTTGCACGAATTAGCTGAGCAAATTGATATTCATGGTGGTGGAAACGACTTGATCTTCCCCCACCACGAAAATGAAATT
GCCCAAACCGAATCATTAACTGGCAAAAATTTCGCCCAAGTCTGGATGCACAATGGCATGCTGCAATTGGCTGGCGAGAA
AATGAGCAAATCGCTGGGCAATTTGATCACGATTGATCAATTTTTAAGCGAACACTCCGCCGATATTATGCGCTTGCTGG
TGCTTTCTGGCTCGTATCGTGCACCATTGGTTTATAATGATGAGGTTTTGGCTGATACCCAACGCAAACTTGAGCGAATT
ATGTCGGCGTTGAAACCAGCCCATGGCACGGCAACCAACGGCCCAGTCGTTGAGACGCTAAATGCAATTGTTGCCAAAGC
CCCAGCCGATTTCCGTGCCGCGATGGACAGCGATTTCAATAGTGCAGCAGCCTTGGCGGTCTTGTTTGATTTGGTGCGTT
CGATCAACGCTGCCCGTGATGCAGGCGTTGGTGGCGAGCCATTCGCAGCAGGTCAAGCCCGTTTACGTGAATTAGCTGCG
GTGCTCGGCTTACGCTTAGAAGCGCCCAGCGCCAGCAAAACCGATGCTGCACCTTTTATCGAATTGTTGATTGAGCTACG
CGCCGAGTTGCGCAAAGCTAAACAATGGGCACTCTCCGATTTAGTACGCAACCGCCTGAGCGAGCTTGATGTACAACTCG
AAGATAGTCCCAACGGCACAACCTGGACGACGAAAGGCTAA

Upstream 100 bases:

>100_bases
ACCAACGGCGATGATCCCTTCGATTGCCTTGATGATTTGCAAAGTTACGAGATGCACTACGCTGACGGTATTTAATTTTT
TGTGTTGAGGAGCCACATCT

Downstream 100 bases:

>100_bases
AACCAAAAGGCAGAAGGCAAAAGTCAGAAATCAAAACAGAGCATACTCTGAACTTTCAACTTCTGCCTTTTGACTTTTGA
TTTCTGACTTTTGACAAAGG

Product: cysteinyl-tRNA synthetase

Products: NA

Alternate protein names: Cysteine--tRNA ligase; CysRS [H]

Number of amino acids: Translated: 466; Mature: 465

Protein sequence:

>466_residues
MALAIYNTLTRQTEPFTPLVADHVSMYVCGPTVYSDAHIGHAMSAVVFDVVRRYLEWSGYTVRHVMNFTDVDDKIIRRAN
EQGRDPMELAESYTLAFLDQLGQLNVLPATAYPRVSTTIPQIIQFIEGLIAKDAAYHASNGDVYFRVRADEDYGKLSRRA
VDDMRSGARIAPDEAKDDPLDFALWKSAKPGEPAWESPWGQGRPGWHIECSAMSLHELAEQIDIHGGGNDLIFPHHENEI
AQTESLTGKNFAQVWMHNGMLQLAGEKMSKSLGNLITIDQFLSEHSADIMRLLVLSGSYRAPLVYNDEVLADTQRKLERI
MSALKPAHGTATNGPVVETLNAIVAKAPADFRAAMDSDFNSAAALAVLFDLVRSINAARDAGVGGEPFAAGQARLRELAA
VLGLRLEAPSASKTDAAPFIELLIELRAELRKAKQWALSDLVRNRLSELDVQLEDSPNGTTWTTKG

Sequences:

>Translated_466_residues
MALAIYNTLTRQTEPFTPLVADHVSMYVCGPTVYSDAHIGHAMSAVVFDVVRRYLEWSGYTVRHVMNFTDVDDKIIRRAN
EQGRDPMELAESYTLAFLDQLGQLNVLPATAYPRVSTTIPQIIQFIEGLIAKDAAYHASNGDVYFRVRADEDYGKLSRRA
VDDMRSGARIAPDEAKDDPLDFALWKSAKPGEPAWESPWGQGRPGWHIECSAMSLHELAEQIDIHGGGNDLIFPHHENEI
AQTESLTGKNFAQVWMHNGMLQLAGEKMSKSLGNLITIDQFLSEHSADIMRLLVLSGSYRAPLVYNDEVLADTQRKLERI
MSALKPAHGTATNGPVVETLNAIVAKAPADFRAAMDSDFNSAAALAVLFDLVRSINAARDAGVGGEPFAAGQARLRELAA
VLGLRLEAPSASKTDAAPFIELLIELRAELRKAKQWALSDLVRNRLSELDVQLEDSPNGTTWTTKG
>Mature_465_residues
ALAIYNTLTRQTEPFTPLVADHVSMYVCGPTVYSDAHIGHAMSAVVFDVVRRYLEWSGYTVRHVMNFTDVDDKIIRRANE
QGRDPMELAESYTLAFLDQLGQLNVLPATAYPRVSTTIPQIIQFIEGLIAKDAAYHASNGDVYFRVRADEDYGKLSRRAV
DDMRSGARIAPDEAKDDPLDFALWKSAKPGEPAWESPWGQGRPGWHIECSAMSLHELAEQIDIHGGGNDLIFPHHENEIA
QTESLTGKNFAQVWMHNGMLQLAGEKMSKSLGNLITIDQFLSEHSADIMRLLVLSGSYRAPLVYNDEVLADTQRKLERIM
SALKPAHGTATNGPVVETLNAIVAKAPADFRAAMDSDFNSAAALAVLFDLVRSINAARDAGVGGEPFAAGQARLRELAAV
LGLRLEAPSASKTDAAPFIELLIELRAELRKAKQWALSDLVRNRLSELDVQLEDSPNGTTWTTKG

Specific function: Unknown

COG id: COG0215

COG function: function code J; Cysteinyl-tRNA synthetase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the class-I aminoacyl-tRNA synthetase family [H]

Homologues:

Organism=Homo sapiens, GI13375695, Length=386, Percent_Identity=43.2642487046632, Blast_Score=283, Evalue=2e-76,
Organism=Homo sapiens, GI21269877, Length=415, Percent_Identity=33.9759036144578, Blast_Score=189, Evalue=7e-48,
Organism=Homo sapiens, GI10835051, Length=408, Percent_Identity=34.3137254901961, Blast_Score=188, Evalue=7e-48,
Organism=Homo sapiens, GI303304987, Length=415, Percent_Identity=33.9759036144578, Blast_Score=188, Evalue=7e-48,
Organism=Homo sapiens, GI62240992, Length=408, Percent_Identity=34.3137254901961, Blast_Score=188, Evalue=8e-48,
Organism=Escherichia coli, GI1786737, Length=475, Percent_Identity=45.6842105263158, Blast_Score=387, Evalue=1e-108,
Organism=Caenorhabditis elegans, GI17509795, Length=242, Percent_Identity=40.0826446280992, Blast_Score=182, Evalue=4e-46,
Organism=Caenorhabditis elegans, GI17509797, Length=242, Percent_Identity=40.0826446280992, Blast_Score=182, Evalue=4e-46,
Organism=Saccharomyces cerevisiae, GI6324082, Length=418, Percent_Identity=31.3397129186603, Blast_Score=191, Evalue=2e-49,
Organism=Drosophila melanogaster, GI19922218, Length=506, Percent_Identity=34.1897233201581, Blast_Score=259, Evalue=3e-69,
Organism=Drosophila melanogaster, GI19922364, Length=228, Percent_Identity=43.859649122807, Blast_Score=181, Evalue=7e-46,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015803
- InterPro:   IPR015273
- InterPro:   IPR014729
- InterPro:   IPR009080 [H]

Pfam domain/function: PF09190 DALR_2; PF01406 tRNA-synt_1e [H]

EC number: =6.1.1.16 [H]

Molecular weight: Translated: 51283; Mature: 51151

Theoretical pI: Translated: 5.11; Mature: 5.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALAIYNTLTRQTEPFTPLVADHVSMYVCGPTVYSDAHIGHAMSAVVFDVVRRYLEWSGY
CEEEEEHHHHCCCCCCCCHHHHHHEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCC
TVRHVMNFTDVDDKIIRRANEQGRDPMELAESYTLAFLDQLGQLNVLPATAYPRVSTTIP
EEEHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCEEECCCCCCCHHHHHH
QIIQFIEGLIAKDAAYHASNGDVYFRVRADEDYGKLSRRAVDDMRSGARIAPDEAKDDPL
HHHHHHHHHHHHHHHEECCCCCEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCC
DFALWKSAKPGEPAWESPWGQGRPGWHIECSAMSLHELAEQIDIHGGGNDLIFPHHENEI
CHHHCCCCCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHCCCCCCCCEECCCCCCHH
AQTESLTGKNFAQVWMHNGMLQLAGEKMSKSLGNLITIDQFLSEHSADIMRLLVLSGSYR
HHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHHCCEEHHHHHHHHHHHHHHHHHHHCCCCC
APLVYNDEVLADTQRKLERIMSALKPAHGTATNGPVVETLNAIVAKAPADFRAAMDSDFN
CCEEECCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHCCCCC
SAAALAVLFDLVRSINAARDAGVGGEPFAAGQARLRELAAVLGLRLEAPSASKTDAAPFI
HHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHH
ELLIELRAELRKAKQWALSDLVRNRLSELDVQLEDSPNGTTWTTKG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCEECCCC
>Mature Secondary Structure 
ALAIYNTLTRQTEPFTPLVADHVSMYVCGPTVYSDAHIGHAMSAVVFDVVRRYLEWSGY
EEEEEHHHHCCCCCCCCHHHHHHEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCC
TVRHVMNFTDVDDKIIRRANEQGRDPMELAESYTLAFLDQLGQLNVLPATAYPRVSTTIP
EEEHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCEEECCCCCCCHHHHHH
QIIQFIEGLIAKDAAYHASNGDVYFRVRADEDYGKLSRRAVDDMRSGARIAPDEAKDDPL
HHHHHHHHHHHHHHHEECCCCCEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCC
DFALWKSAKPGEPAWESPWGQGRPGWHIECSAMSLHELAEQIDIHGGGNDLIFPHHENEI
CHHHCCCCCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHCCCCCCCCEECCCCCCHH
AQTESLTGKNFAQVWMHNGMLQLAGEKMSKSLGNLITIDQFLSEHSADIMRLLVLSGSYR
HHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHHCCEEHHHHHHHHHHHHHHHHHHHCCCCC
APLVYNDEVLADTQRKLERIMSALKPAHGTATNGPVVETLNAIVAKAPADFRAAMDSDFN
CCEEECCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHCCCCC
SAAALAVLFDLVRSINAARDAGVGGEPFAAGQARLRELAAVLGLRLEAPSASKTDAAPFI
HHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHH
ELLIELRAELRKAKQWALSDLVRNRLSELDVQLEDSPNGTTWTTKG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA