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The map label for this gene is rsmC [H]

Identifier: 159899618

GI number: 159899618

Start: 3908066

End: 3909163

Strand: Direct

Name: rsmC [H]

Synonym: Haur_3099

Alternate gene names: 159899618

Gene position: 3908066-3909163 (Clockwise)

Preceding gene: 159899608

Following gene: 159899619

Centisome position: 61.58

GC content: 49.64

Gene sequence:

>1098_bases
ATGCGTATGAATGCATGGTTGTTGCCAGTACCCTTTGATACCGAACGTGACGATTGGGGCGCAACTTTATTGGCTGAATG
GGGAGCCAGCGTGGTTACGCCAGGCCAGCAAGCCTTGGTGATCGGCGCAGGCACTGGCCGGATTGGCTTGGCATTGGCGC
GAGCAGGCGCACATGTCAGTTTTGCTGATGATTCAATTGTGGCCTTGGCCGCTGCCCGCCAGAGCTTTGCCCAAGCCAAG
TTGCCAGCCCAATTTTTTAGCACCACCGACTTAACCCCAAGCAAACCGTTTGACCTGGTGTTGATTAACATTTTGTGGTG
GAGCGATAACCAGCGTGGCGCAGAACTGATTAATTTGGCAGCGCAACACACCAATGCTGGCGGGATTGTGGCGATTGGCG
GTGGTAAACAAGCTGGATTAAGTGGAGCAACCACGTTGCTCGAACAGATTGTCGGGCCAAGCGTCAAAACGCTCTATAAA
AAAGGTCATCATGTGGTAATGGCATTTCGGCCTTTACACTGGCAAGCTCAGCCAAGCCAAACAACCCAGCATCAGCTCAG
TCATGGCGACCATGCATTAACTATCGAGGCAACTGCTGGCGTATTTGCTCAAGGCCAACTTGATCCAGCCAGTGCTATGT
TATTGGATGCAGTGCACATTCAAGCCAACCAGCGCGTGCTTGATCTTGGCTGTGGCGCTGGAATTTTGGGCATGTTTTTG
CAACAGCGCGAATCCACTCTTGCTTTAACCTACATCGATAGTACCATGGTAGCAATTGAAGCCACTAAACGAAACTTACA
AACCAACCAATTAACTGGCCGAGTGCTGGCATCTGATGGAATTCAAGCCGTCAATGGCGAGCAATTTGATCTGGTCGTGT
CGAATCCACCATTTCATGTTGGTCGAGTTCAAAGCCCACAACTGGCCGAAAATCTCTTAAAGCAGGCTGTCCAAGTGTTG
GCTCCCAATGGCCAATTGGTGATTGTTGCCAATCGCTTTTTGCGCTATGAACCATTGCTAGAAACTGTTTTGAGTAATGT
GCATGAGCTAGCAGGCGATCAACGTTATAAAGTTTTGGTTGGTACAAAAGCAAATTAG

Upstream 100 bases:

>100_bases
CCTCAAAACGATCAATAGCGCAACCAGCCAATCGCGATTAAAATGATGCAGCTATTCTACCAAAAGCAGGTGGGCTACCA
CTGTATTATTTAAGGATGTA

Downstream 100 bases:

>100_bases
CTCATTAATGCAACCTAGGTTTAGTAATTGCGTATTCCATGCTGTGAGTATTTGTGCTCACAGGAGGCTGTTATGAGTAT
GACGCTGGGCGAGATCGCTA

Product: rRNA (guanine-N(2)-)-methyltransferase

Products: NA

Alternate protein names: 16S rRNA m2G1207 methyltransferase; rRNA (guanine-N(2)-)-methyltransferase rsmC [H]

Number of amino acids: Translated: 365; Mature: 365

Protein sequence:

>365_residues
MRMNAWLLPVPFDTERDDWGATLLAEWGASVVTPGQQALVIGAGTGRIGLALARAGAHVSFADDSIVALAAARQSFAQAK
LPAQFFSTTDLTPSKPFDLVLINILWWSDNQRGAELINLAAQHTNAGGIVAIGGGKQAGLSGATTLLEQIVGPSVKTLYK
KGHHVVMAFRPLHWQAQPSQTTQHQLSHGDHALTIEATAGVFAQGQLDPASAMLLDAVHIQANQRVLDLGCGAGILGMFL
QQRESTLALTYIDSTMVAIEATKRNLQTNQLTGRVLASDGIQAVNGEQFDLVVSNPPFHVGRVQSPQLAENLLKQAVQVL
APNGQLVIVANRFLRYEPLLETVLSNVHELAGDQRYKVLVGTKAN

Sequences:

>Translated_365_residues
MRMNAWLLPVPFDTERDDWGATLLAEWGASVVTPGQQALVIGAGTGRIGLALARAGAHVSFADDSIVALAAARQSFAQAK
LPAQFFSTTDLTPSKPFDLVLINILWWSDNQRGAELINLAAQHTNAGGIVAIGGGKQAGLSGATTLLEQIVGPSVKTLYK
KGHHVVMAFRPLHWQAQPSQTTQHQLSHGDHALTIEATAGVFAQGQLDPASAMLLDAVHIQANQRVLDLGCGAGILGMFL
QQRESTLALTYIDSTMVAIEATKRNLQTNQLTGRVLASDGIQAVNGEQFDLVVSNPPFHVGRVQSPQLAENLLKQAVQVL
APNGQLVIVANRFLRYEPLLETVLSNVHELAGDQRYKVLVGTKAN
>Mature_365_residues
MRMNAWLLPVPFDTERDDWGATLLAEWGASVVTPGQQALVIGAGTGRIGLALARAGAHVSFADDSIVALAAARQSFAQAK
LPAQFFSTTDLTPSKPFDLVLINILWWSDNQRGAELINLAAQHTNAGGIVAIGGGKQAGLSGATTLLEQIVGPSVKTLYK
KGHHVVMAFRPLHWQAQPSQTTQHQLSHGDHALTIEATAGVFAQGQLDPASAMLLDAVHIQANQRVLDLGCGAGILGMFL
QQRESTLALTYIDSTMVAIEATKRNLQTNQLTGRVLASDGIQAVNGEQFDLVVSNPPFHVGRVQSPQLAENLLKQAVQVL
APNGQLVIVANRFLRYEPLLETVLSNVHELAGDQRYKVLVGTKAN

Specific function: Specifically methylates the guanosine in position 1207 of 16S rRNA in the 30S particle [H]

COG id: COG2813

COG function: function code J; 16S RNA G1207 methylase RsmC

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. RsmC family [H]

Homologues:

Organism=Escherichia coli, GI1790830, Length=166, Percent_Identity=37.3493975903614, Blast_Score=109, Evalue=3e-25,
Organism=Escherichia coli, GI87082206, Length=238, Percent_Identity=27.3109243697479, Blast_Score=99, Evalue=5e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002052
- InterPro:   IPR013675
- InterPro:   IPR007848 [H]

Pfam domain/function: PF05175 MTS; PF08468 MTS_N [H]

EC number: =2.1.1.172 [H]

Molecular weight: Translated: 39030; Mature: 39030

Theoretical pI: Translated: 6.92; Mature: 6.92

Prosite motif: PS00092 N6_MTASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRMNAWLLPVPFDTERDDWGATLLAEWGASVVTPGQQALVIGAGTGRIGLALARAGAHVS
CCCCEEEEECCCCCCCCCCCHHHHHHCCCCEECCCCEEEEEECCCCCCEEEEECCCCEEE
FADDSIVALAAARQSFAQAKLPAQFFSTTDLTPSKPFDLVLINILWWSDNQRGAELINLA
ECCCCHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCEEEEEEEEEECCCCCCHHHHHHH
AQHTNAGGIVAIGGGKQAGLSGATTLLEQIVGPSVKTLYKKGHHVVMAFRPLHWQAQPSQ
HHCCCCCCEEEECCCCCCCCCHHHHHHHHHHCCCHHHHHHCCCEEEEEEECCCCCCCCCC
TTQHQLSHGDHALTIEATAGVFAQGQLDPASAMLLDAVHIQANQRVLDLGCGAGILGMFL
CHHHHHCCCCEEEEEEECCCEEECCCCCHHHHHHHHHEEEECCCEEEEECCCHHHHHHHH
QQRESTLALTYIDSTMVAIEATKRNLQTNQLTGRVLASDGIQAVNGEQFDLVVSNPPFHV
HHCCCEEEEEEECCEEEEEEEHHCCCCCHHHCCEEEECCCCEECCCCEEEEEECCCCCCC
GRVQSPQLAENLLKQAVQVLAPNGQLVIVANRFLRYEPLLETVLSNVHELAGDQRYKVLV
CCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHHHHCCCCEEEEEE
GTKAN
EECCC
>Mature Secondary Structure
MRMNAWLLPVPFDTERDDWGATLLAEWGASVVTPGQQALVIGAGTGRIGLALARAGAHVS
CCCCEEEEECCCCCCCCCCCHHHHHHCCCCEECCCCEEEEEECCCCCCEEEEECCCCEEE
FADDSIVALAAARQSFAQAKLPAQFFSTTDLTPSKPFDLVLINILWWSDNQRGAELINLA
ECCCCHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCEEEEEEEEEECCCCCCHHHHHHH
AQHTNAGGIVAIGGGKQAGLSGATTLLEQIVGPSVKTLYKKGHHVVMAFRPLHWQAQPSQ
HHCCCCCCEEEECCCCCCCCCHHHHHHHHHHCCCHHHHHHCCCEEEEEEECCCCCCCCCC
TTQHQLSHGDHALTIEATAGVFAQGQLDPASAMLLDAVHIQANQRVLDLGCGAGILGMFL
CHHHHHCCCCEEEEEEECCCEEECCCCCHHHHHHHHHEEEECCCEEEEECCCHHHHHHHH
QQRESTLALTYIDSTMVAIEATKRNLQTNQLTGRVLASDGIQAVNGEQFDLVVSNPPFHV
HHCCCEEEEEEECCEEEEEEEHHCCCCCHHHCCEEEECCCCEECCCCEEEEEECCCCCCC
GRVQSPQLAENLLKQAVQVLAPNGQLVIVANRFLRYEPLLETVLSNVHELAGDQRYKVLV
CCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHHHHCCCCEEEEEE
GTKAN
EECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA