Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
---|---|
Accession | NC_009972 |
Length | 6,346,587 |
Click here to switch to the map view.
The map label for this gene is yjcK [H]
Identifier: 159899608
GI number: 159899608
Start: 3898690
End: 3899238
Strand: Direct
Name: yjcK [H]
Synonym: Haur_3089
Alternate gene names: 159899608
Gene position: 3898690-3899238 (Clockwise)
Preceding gene: 159899607
Following gene: 159899618
Centisome position: 61.43
GC content: 50.09
Gene sequence:
>549_bases ATGCTGTTACGTCAAACCGCACGGCTTCAATTGCATGTGCTCGAAGAATACGATGCCCAACGGGCATTGGAGTTCTATCA GGCGAATGCCGAATTTCGCCAACCTTGGTCGCCAACCATGGATGCGAGTTTTCTGACGCTTGACGGCCAACGCGAACGCC TACGCAGCGATCGGATTAGCCGCGATCGTGAGCAAGGTCTTGCGTTATGGCTGACCGAAATTGATCAACCTGAGCTAGTT GGAATGGTGGCCTTGCGCAATATTGTGCGTGGAGCGTTTTGGTCGTGCCATCTTGGCTACGAAATTCACAACGCCTATGC CAAACGTGGCTATATCAGCGAGGCTTTGCAGGCGGTTGTGGAATATGCGTTTGTGGATTTACGTCTGCACCGCATCGAAG CCAACATTATGCCGCGCAACCAACATTCGATTGGGGTTGTTGAGAAATTAGGATTTGAGCACGAAGGCCTCGCCCGTAAA TATCTCAAAATCAATGGCACGTGGGAAGATCATATCCATTATGTGCTTTTGAATGCAGCAGTTGAGTAA
Upstream 100 bases:
>100_bases CCTCTCCCGCAAGCGCGGAGAGGGGGAATTTTGTGCTCTGCAAGATTTTAGCCTGCTCAAGGCTCATTGCACCTACATTT TAGATTTCAGGAGAATGGCG
Downstream 100 bases:
>100_bases GAATCAAATCAAAAGTCAAAAGGCAAAAATCAAAATAAGCTATCGAAATAGTTTCAACCAATTTAGATGGTTGACTAGGG TGTGAGGATTCAGGGTCGAG
Product: GCN5-like N-acetyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 182; Mature: 182
Protein sequence:
>182_residues MLLRQTARLQLHVLEEYDAQRALEFYQANAEFRQPWSPTMDASFLTLDGQRERLRSDRISRDREQGLALWLTEIDQPELV GMVALRNIVRGAFWSCHLGYEIHNAYAKRGYISEALQAVVEYAFVDLRLHRIEANIMPRNQHSIGVVEKLGFEHEGLARK YLKINGTWEDHIHYVLLNAAVE
Sequences:
>Translated_182_residues MLLRQTARLQLHVLEEYDAQRALEFYQANAEFRQPWSPTMDASFLTLDGQRERLRSDRISRDREQGLALWLTEIDQPELV GMVALRNIVRGAFWSCHLGYEIHNAYAKRGYISEALQAVVEYAFVDLRLHRIEANIMPRNQHSIGVVEKLGFEHEGLARK YLKINGTWEDHIHYVLLNAAVE >Mature_182_residues MLLRQTARLQLHVLEEYDAQRALEFYQANAEFRQPWSPTMDASFLTLDGQRERLRSDRISRDREQGLALWLTEIDQPELV GMVALRNIVRGAFWSCHLGYEIHNAYAKRGYISEALQAVVEYAFVDLRLHRIEANIMPRNQHSIGVVEKLGFEHEGLARK YLKINGTWEDHIHYVLLNAAVE
Specific function: This enzyme acetylates the N-terminal alanine of ribosomal protein S5 [H]
COG id: COG1670
COG function: function code J; Acetyltransferases, including N-acetylases of ribosomal proteins
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 N-acetyltransferase domain [H]
Homologues:
Organism=Escherichia coli, GI1787305, Length=169, Percent_Identity=37.8698224852071, Blast_Score=120, Evalue=6e-29,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000182 - InterPro: IPR016181 [H]
Pfam domain/function: PF00583 Acetyltransf_1 [H]
EC number: =2.3.1.128 [H]
Molecular weight: Translated: 21218; Mature: 21218
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLRQTARLQLHVLEEYDAQRALEFYQANAEFRQPWSPTMDASFLTLDGQRERLRSDRIS CCCCCCHHHHEEHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHC RDREQGLALWLTEIDQPELVGMVALRNIVRGAFWSCHLGYEIHNAYAKRGYISEALQAVV CHHHCCEEEEEECCCCCHHHHHHHHHHHHHHHHHEEECCHHHHHHHHHCCHHHHHHHHHH EYAFVDLRLHRIEANIMPRNQHSIGVVEKLGFEHEGLARKYLKINGTWEDHIHYVLLNAA HHHHHHHHHEEEEEECCCCCCCCCHHHHHHCCCCCCHHHHEEEECCCHHHHHEEEEEEEE VE CC >Mature Secondary Structure MLLRQTARLQLHVLEEYDAQRALEFYQANAEFRQPWSPTMDASFLTLDGQRERLRSDRIS CCCCCCHHHHEEHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHC RDREQGLALWLTEIDQPELVGMVALRNIVRGAFWSCHLGYEIHNAYAKRGYISEALQAVV CHHHCCEEEEEECCCCCHHHHHHHHHHHHHHHHHEEECCHHHHHHHHHCCHHHHHHHHHH EYAFVDLRLHRIEANIMPRNQHSIGVVEKLGFEHEGLARKYLKINGTWEDHIHYVLLNAA HHHHHHHHHEEEEEECCCCCCCCCHHHHHHCCCCCCHHHHEEEECCCHHHHHEEEEEEEE VE CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]