Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
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Accession | NC_009972 |
Length | 6,346,587 |
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The map label for this gene is nuoA [H]
Identifier: 159899598
GI number: 159899598
Start: 3889399
End: 3889788
Strand: Direct
Name: nuoA [H]
Synonym: Haur_3079
Alternate gene names: 159899598
Gene position: 3889399-3889788 (Clockwise)
Preceding gene: 159899596
Following gene: 159899599
Centisome position: 61.28
GC content: 50.77
Gene sequence:
>390_bases ATGCCGATTGTGTCCGTGCCGGAGGAGCAGCTTATGCTACGGCCATTTTTGCCGATCTTCATTATCTTTGTTGTTGGGGT GGTGATTCCCGTGGCAGCCTTGGTGCTGTCGGCCATCCTTGGCCCCAAAAAAGCAACAAAGCGCAAACTCATCCCTTACG AATCAGGGATGACCCCGCTGGGCGATGCAATGCAACGGATGCCAGTCCGTTTCTATGTGGTTGCCATGCTGTTCATCTTG TTCGATATTGAAATTATCTTTTTAATGCCCTACGCACTTTATTTCCGCCAAATGGGCCTATTTGGGCTAGCCGAAATGGG CGCATTTATGGGCATTCTGCTAGTTGGCTTTGTCTACATCTGGCGGAAAGGGGCGCTCCGATGGGATTAG
Upstream 100 bases:
>100_bases TAGAACGCAAAGTCAATTTAGCCGCGTCAGGTTGCCGCAAAACGCGGGTGAGCGTACTTTGTCCTTTTTGACACAATCAT CAATAAGGATATAATTCGTT
Downstream 100 bases:
>100_bases AAGAAAAAGCTGGCGATTTGGGGATTGTTACGACAACCCTCGAAGGTGTCGTCAACTGGGGTCGCACCAAGGCGATGTGG CCGATGTTGTTTGGGTTGGC
Product: NADH-ubiquinone/plastoquinone oxidoreductase subunit 3
Products: NA
Alternate protein names: NADH dehydrogenase I subunit A; NDH-1 subunit A; NUO1 [H]
Number of amino acids: Translated: 129; Mature: 128
Protein sequence:
>129_residues MPIVSVPEEQLMLRPFLPIFIIFVVGVVIPVAALVLSAILGPKKATKRKLIPYESGMTPLGDAMQRMPVRFYVVAMLFIL FDIEIIFLMPYALYFRQMGLFGLAEMGAFMGILLVGFVYIWRKGALRWD
Sequences:
>Translated_129_residues MPIVSVPEEQLMLRPFLPIFIIFVVGVVIPVAALVLSAILGPKKATKRKLIPYESGMTPLGDAMQRMPVRFYVVAMLFIL FDIEIIFLMPYALYFRQMGLFGLAEMGAFMGILLVGFVYIWRKGALRWD >Mature_128_residues PIVSVPEEQLMLRPFLPIFIIFVVGVVIPVAALVLSAILGPKKATKRKLIPYESGMTPLGDAMQRMPVRFYVVAMLFILF DIEIIFLMPYALYFRQMGLFGLAEMGAFMGILLVGFVYIWRKGALRWD
Specific function: NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translo
COG id: COG0838
COG function: function code C; NADH:ubiquinone oxidoreductase subunit 3 (chain A)
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the complex I subunit 3 family [H]
Homologues:
Organism=Escherichia coli, GI1788625, Length=124, Percent_Identity=34.6774193548387, Blast_Score=81, Evalue=2e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR023043 - InterPro: IPR000440 [H]
Pfam domain/function: PF00507 Oxidored_q4 [H]
EC number: =1.6.99.5 [H]
Molecular weight: Translated: 14646; Mature: 14515
Theoretical pI: Translated: 10.03; Mature: 10.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 7.8 %Met (Translated Protein) 7.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 7.0 %Met (Mature Protein) 7.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPIVSVPEEQLMLRPFLPIFIIFVVGVVIPVAALVLSAILGPKKATKRKLIPYESGMTPL CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCH GDAMQRMPVRFYVVAMLFILFDIEIIFLMPYALYFRQMGLFGLAEMGAFMGILLVGFVYI HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH WRKGALRWD HHHCCCCCC >Mature Secondary Structure PIVSVPEEQLMLRPFLPIFIIFVVGVVIPVAALVLSAILGPKKATKRKLIPYESGMTPL CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCH GDAMQRMPVRFYVVAMLFILFDIEIIFLMPYALYFRQMGLFGLAEMGAFMGILLVGFVYI HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH WRKGALRWD HHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA