Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
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Accession | NC_009972 |
Length | 6,346,587 |
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The map label for this gene is 159899585
Identifier: 159899585
GI number: 159899585
Start: 3871911
End: 3872414
Strand: Direct
Name: 159899585
Synonym: Haur_3066
Alternate gene names: NA
Gene position: 3871911-3872414 (Clockwise)
Preceding gene: 159899584
Following gene: 159899586
Centisome position: 61.01
GC content: 55.36
Gene sequence:
>504_bases ATGAGTGCGCTGATGCGCTTAGGCCAACTCTGGGCGGCTTTACGCGCCAAGGTAACTCCCGCCGAACGCGCCTTAGTGCA ACAACTTTTAGCGAGCCACGAGTATCCACTGTTTGAACGCATGCCGCTGTATGATCAACGCCATTGCCTTGATGTGTATA CGACCTTAGTTACTGCGGGTGAGCAGGATGCCGAATTGCTGCGGCTGGCGTTGTATCACGATACTGGTAAGGTTGATCGT CAAGGTCGGCCCGTATCGTTGATTTGGTATGGGATTGCGGTGGTATGGAAACAGCTTGCGCCGCGATTTTATGCTTGGGC CGCGCAAAAGCCGCGTTGGTGGTGTCGTTCAATCTATCGCTATGCCCATCATGGGCCGCTCGGAGCCGATTTGGCGGCTG AGGCTGGTTGCTCAGCCACCATTGTCGCGACTATTCGCCATTATCATGACGATGCGCCAACTGGTTTGGCCGCCCGTTTG CGTTGGGCCGACGATCAGCATTAA
Upstream 100 bases:
>100_bases CCCCGATCTTCCAATTATTCCAACGGATCGTTTTGCCCGTTGCTGGTTGTTGTCATGCCGTTGGCCATAATCATGATCAT GCTGAAGCCTAGGAGTTTTC
Downstream 100 bases:
>100_bases TTCAAGGAATCGGCTGTGATTGAATATCTACTACAGGCGTTGGGCTTGGGGCTGGCGGCTGGCCTCTTGCCTGGGCCAAT GTTGGGCTTGGTGATTCGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 167; Mature: 166
Protein sequence:
>167_residues MSALMRLGQLWAALRAKVTPAERALVQQLLASHEYPLFERMPLYDQRHCLDVYTTLVTAGEQDAELLRLALYHDTGKVDR QGRPVSLIWYGIAVVWKQLAPRFYAWAAQKPRWWCRSIYRYAHHGPLGADLAAEAGCSATIVATIRHYHDDAPTGLAARL RWADDQH
Sequences:
>Translated_167_residues MSALMRLGQLWAALRAKVTPAERALVQQLLASHEYPLFERMPLYDQRHCLDVYTTLVTAGEQDAELLRLALYHDTGKVDR QGRPVSLIWYGIAVVWKQLAPRFYAWAAQKPRWWCRSIYRYAHHGPLGADLAAEAGCSATIVATIRHYHDDAPTGLAARL RWADDQH >Mature_166_residues SALMRLGQLWAALRAKVTPAERALVQQLLASHEYPLFERMPLYDQRHCLDVYTTLVTAGEQDAELLRLALYHDTGKVDRQ GRPVSLIWYGIAVVWKQLAPRFYAWAAQKPRWWCRSIYRYAHHGPLGADLAAEAGCSATIVATIRHYHDDAPTGLAARLR WADDQH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19036; Mature: 18905
Theoretical pI: Translated: 8.79; Mature: 8.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSALMRLGQLWAALRAKVTPAERALVQQLLASHEYPLFERMPLYDQRHCLDVYTTLVTAG CHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHCCCCCCHHHHHHHHHHHHHCC EQDAELLRLALYHDTGKVDRQGRPVSLIWYGIAVVWKQLAPRFYAWAAQKPRWWCRSIYR CCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH YAHHGPLGADLAAEAGCSATIVATIRHYHDDAPTGLAARLRWADDQH HHHCCCCCCCHHHHCCCCHHHHHHHHHHCCCCCCCHHHHCCCCCCCC >Mature Secondary Structure SALMRLGQLWAALRAKVTPAERALVQQLLASHEYPLFERMPLYDQRHCLDVYTTLVTAG HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHCCCCCCHHHHHHHHHHHHHCC EQDAELLRLALYHDTGKVDRQGRPVSLIWYGIAVVWKQLAPRFYAWAAQKPRWWCRSIYR CCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH YAHHGPLGADLAAEAGCSATIVATIRHYHDDAPTGLAARLRWADDQH HHHCCCCCCCHHHHCCCCHHHHHHHHHHCCCCCCCHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA