Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
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Accession | NC_009972 |
Length | 6,346,587 |
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The map label for this gene is 159899573
Identifier: 159899573
GI number: 159899573
Start: 3858586
End: 3859173
Strand: Direct
Name: 159899573
Synonym: Haur_3054
Alternate gene names: NA
Gene position: 3858586-3859173 (Clockwise)
Preceding gene: 159899572
Following gene: 159899574
Centisome position: 60.8
GC content: 47.45
Gene sequence:
>588_bases GTGAGCAATCAACCACCATATGGTCAACAACCGCCGCAACAACCAGGCTACCCACCACAGCAGCCCTATGGCCAACAACC AGGCTACCCACCACAACAGCCAGGCTACCCACCACAGCAGCCCTATGGCCAACAACCCTATGGTTATCCACCACAACCCC AAAAACGTAGCGGGTGTCTCAAGTGGGGGATTATTGGATCGCTCGTCTTATTGTTGCTCTGCGGTGGTGGCGGTTTTTGG CTCTATAAATTCACCTTAAACACGATTGGCACAGTTAATACAAGCCTTGATGGCTTTATGAAAGCTGGAGCCGCCAATGA TGTTAACGCAGCTAAAGCCTTTGTCGATAGCAGTTTTATTACCGATGAACAGCTTGAAAATTTATTTAGCCAACGTGAGT TGTTCGAAGGCTATAGCAGCATCGAAGATCTACCAGCATCGACCAACGCCAATAGTAGCACAGGTCAGTCAACAACCCTC AGTCTGCAAGGAACAATCAATTATTCCGATGGTATGGGAACCTACGACGTACAATATAATCTTGAAGGCGAGATCTGGAA AATTCGCTACGTCAATATCAAACGCTAA
Upstream 100 bases:
>100_bases CATTGGCGTTTAAGTGCATCGTTCTTGCTCTTCTCAGCAGCCAAGCCATCGTCTATACTAGGCTTGTAACGCAATTCTGT GTGTTCTTTGGAGGTATTTT
Downstream 100 bases:
>100_bases ACCTCATCTTAAACTGCACCAAGCCCTCTTCCACGAGGGCTTGGTCGTATCCACAATGCAGCCTCACAACCTAGCCACAA TTCAATAATTCCAATCCTCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 195; Mature: 194
Protein sequence:
>195_residues MSNQPPYGQQPPQQPGYPPQQPYGQQPGYPPQQPGYPPQQPYGQQPYGYPPQPQKRSGCLKWGIIGSLVLLLLCGGGGFW LYKFTLNTIGTVNTSLDGFMKAGAANDVNAAKAFVDSSFITDEQLENLFSQRELFEGYSSIEDLPASTNANSSTGQSTTL SLQGTINYSDGMGTYDVQYNLEGEIWKIRYVNIKR
Sequences:
>Translated_195_residues MSNQPPYGQQPPQQPGYPPQQPYGQQPGYPPQQPGYPPQQPYGQQPYGYPPQPQKRSGCLKWGIIGSLVLLLLCGGGGFW LYKFTLNTIGTVNTSLDGFMKAGAANDVNAAKAFVDSSFITDEQLENLFSQRELFEGYSSIEDLPASTNANSSTGQSTTL SLQGTINYSDGMGTYDVQYNLEGEIWKIRYVNIKR >Mature_194_residues SNQPPYGQQPPQQPGYPPQQPYGQQPGYPPQQPGYPPQQPYGQQPYGYPPQPQKRSGCLKWGIIGSLVLLLLCGGGGFWL YKFTLNTIGTVNTSLDGFMKAGAANDVNAAKAFVDSSFITDEQLENLFSQRELFEGYSSIEDLPASTNANSSTGQSTTLS LQGTINYSDGMGTYDVQYNLEGEIWKIRYVNIKR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21462; Mature: 21331
Theoretical pI: Translated: 4.59; Mature: 4.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNQPPYGQQPPQQPGYPPQQPYGQQPGYPPQQPGYPPQQPYGQQPYGYPPQPQKRSGCL CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC KWGIIGSLVLLLLCGGGGFWLYKFTLNTIGTVNTSLDGFMKAGAANDVNAAKAFVDSSFI HHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCHHHHHHCCCCCCHHHHHHHHHCCCC TDEQLENLFSQRELFEGYSSIEDLPASTNANSSTGQSTTLSLQGTINYSDGMGTYDVQYN CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEEEEEECCCCCEEEEEEE LEGEIWKIRYVNIKR CCCCEEEEEEEEECC >Mature Secondary Structure SNQPPYGQQPPQQPGYPPQQPYGQQPGYPPQQPGYPPQQPYGQQPYGYPPQPQKRSGCL CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC KWGIIGSLVLLLLCGGGGFWLYKFTLNTIGTVNTSLDGFMKAGAANDVNAAKAFVDSSFI HHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCHHHHHHCCCCCCHHHHHHHHHCCCC TDEQLENLFSQRELFEGYSSIEDLPASTNANSSTGQSTTLSLQGTINYSDGMGTYDVQYN CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEEEEEECCCCCEEEEEEE LEGEIWKIRYVNIKR CCCCEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA