Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is 159899574

Identifier: 159899574

GI number: 159899574

Start: 3859317

End: 3861164

Strand: Direct

Name: 159899574

Synonym: Haur_3055

Alternate gene names: NA

Gene position: 3859317-3861164 (Clockwise)

Preceding gene: 159899573

Following gene: 159899575

Centisome position: 60.81

GC content: 51.62

Gene sequence:

>1848_bases
ATGTCGTCTAGGTCGATTAATCGCCGGCTATTGGTGCTTCAAGCAGGCTGGACAGTTGCTCAGGCCCAGTTATTGCTCGC
CCATAGCCAAGCCGAATATGTGGTTGTTCAACGCACTGAGCCACAAATCTACTGGTATGTCTACCCTCTCGAAGTTGTCC
AAGAACGCTTAAGCTACCATCACCCTGATATTGCGATCTACCTGGCGCTCAATTTGCAAGAAACCTCAGCTAGTTCGACT
CTCAACAGCAATCAACTCGAAACCGCCGACTATTTAAGCGTGGTGCTTGATGATCAGCAACACTTGCAAGGCGTAGTTAA
TCCGAGTGCTCAAGCCAAAGGCACAGAATTTGATCCATTCTTCAAGGCCTATCCCTCAGTAGTTGCCCAAAACCAAGCCC
AACTTAACCAAGCCTTTGATCTAGCGGTTGGCTTTCGCGATACGCCTGATGCTGGCTTAATCGGTGGCCATAACCCGATT
GTCATTCATGGCTTGCAAACTGATGAACGTTGCACAATTATGCTCAGCGGCGATGGCTTGCAGTTTGATCGAGAGCAAGC
CGAATTGGCCTTTGACATTCAGGCAACCGTATTTTTTAAGGCCACGCCAACCCGCACAGGTCGCTGTGTAATCTATGTCG
ATTATTATCGCCAACGCCAATTGGTGGGCCATGCCGAGCGGGTTGTGCTGGTCGATAGCAACGCTGAACCAGAACCTAGC
AATGCTAGCCCGTTTGATTTTGGCTCAACTCCGGTCGATTTACTGATCAACCTGCGCCGTGATGGCGATACGTTCAAATG
GACGGCAATGCCGCATGATCAAGCCTTTACACCGGTGCACAATTTGCCGAGCCAACAAGCCTTATCCGAGCAGGCTGCCC
AAAATTGTGCCGTTGATCTGTTGGGTGCGGCGGTTAATCCAAGTTTATTGTTGGCGCAACGCGAACTTGAAGCGCTTGCC
AGCGATCTAGGCCAATTTGTCCCAAGCCCAATTTGGCAATTACACAGCGATTTGGCCCAGAAATTGCAGCGTCCACTCAC
GGTTTTGCTGCGCAGCAACGATTTGGCTTTGCCTTGGGAATTAGCGATGGTCGAAGCCCCTTTGCTAGCTGGCGATCAGC
CGCTGTATTGGGCCGCCCAAACCCATTTTGCCCGTTGGTATATTCACCCCCAAGTTAGCCCAATGCCACCCGATCAACTC
AACATTAGCCAAATTAGCGCAATTGCCTCACGCTATGGCTGGGATTCAGGCCAAGCTGAATTGGTGCATGCAGTTGATGA
GCAAACCATGCTGCAAAACCAATGGCAAGCCCAAGCCTACGAAGCCACGATTCAGGCGCTTGATCCATTGTTGAGCCAAG
CCACGACCCAAGCTGGCCATCTTTTACACTTTGCCGTGCATGGCCGCAGCCAACCCAACGCCCGCATTCAAGAAATTATC
TTGGCTGATAATAATGCGATTTCGGCCAAAGCCTTGGTGGGCAATACTCGCCGTCGCCCGCCCCAATTTAGCTTTGTGTT
TATCAATGCCTGCCAAGTTGCGACCCCAGGCCAGAGCTTAGGCCAAGCGGCGGGCTTCCCCGCCGAAATTCTCAAAAGTG
GTGCGGCGGGCTTTGTTGCACCATTGTGGGAAGCTGATGATCAAGCAGCCGGAACGTTTGCCGCTCAATTTTATAGCCAA
GCGTTTCAAGCCCAACCGTTGGGCGCAATTTTGCAACAATATCGCCTAAGTTATGTGGCCAATAGCACCACCACCCGCCT
TGCCTATATCTTTTATGGCCATCCCGCCTTGCGTTTGGCCTATTCGAGCAAAGGAGCAACCCATGCCCAACAACCAAGTG
CGGCTTGA

Upstream 100 bases:

>100_bases
GTCGTATCCACAATGCAGCCTCACAACCTAGCCACAATTCAATAATTCCAATCCTCAAACGTTGATTTAATAAGTCACGC
TGGATCATTGGGAGTTTGCT

Downstream 100 bases:

>100_bases
TGGCAGCAGCCAAGCCCATGAAGTTGCCCCAAATTATCGGATTATTGCCCAAGGTATCACGGGCAATGCCGCCGTACCAA
GCCAAGAGCCACGGCGCGGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 615; Mature: 614

Protein sequence:

>615_residues
MSSRSINRRLLVLQAGWTVAQAQLLLAHSQAEYVVVQRTEPQIYWYVYPLEVVQERLSYHHPDIAIYLALNLQETSASST
LNSNQLETADYLSVVLDDQQHLQGVVNPSAQAKGTEFDPFFKAYPSVVAQNQAQLNQAFDLAVGFRDTPDAGLIGGHNPI
VIHGLQTDERCTIMLSGDGLQFDREQAELAFDIQATVFFKATPTRTGRCVIYVDYYRQRQLVGHAERVVLVDSNAEPEPS
NASPFDFGSTPVDLLINLRRDGDTFKWTAMPHDQAFTPVHNLPSQQALSEQAAQNCAVDLLGAAVNPSLLLAQRELEALA
SDLGQFVPSPIWQLHSDLAQKLQRPLTVLLRSNDLALPWELAMVEAPLLAGDQPLYWAAQTHFARWYIHPQVSPMPPDQL
NISQISAIASRYGWDSGQAELVHAVDEQTMLQNQWQAQAYEATIQALDPLLSQATTQAGHLLHFAVHGRSQPNARIQEII
LADNNAISAKALVGNTRRRPPQFSFVFINACQVATPGQSLGQAAGFPAEILKSGAAGFVAPLWEADDQAAGTFAAQFYSQ
AFQAQPLGAILQQYRLSYVANSTTTRLAYIFYGHPALRLAYSSKGATHAQQPSAA

Sequences:

>Translated_615_residues
MSSRSINRRLLVLQAGWTVAQAQLLLAHSQAEYVVVQRTEPQIYWYVYPLEVVQERLSYHHPDIAIYLALNLQETSASST
LNSNQLETADYLSVVLDDQQHLQGVVNPSAQAKGTEFDPFFKAYPSVVAQNQAQLNQAFDLAVGFRDTPDAGLIGGHNPI
VIHGLQTDERCTIMLSGDGLQFDREQAELAFDIQATVFFKATPTRTGRCVIYVDYYRQRQLVGHAERVVLVDSNAEPEPS
NASPFDFGSTPVDLLINLRRDGDTFKWTAMPHDQAFTPVHNLPSQQALSEQAAQNCAVDLLGAAVNPSLLLAQRELEALA
SDLGQFVPSPIWQLHSDLAQKLQRPLTVLLRSNDLALPWELAMVEAPLLAGDQPLYWAAQTHFARWYIHPQVSPMPPDQL
NISQISAIASRYGWDSGQAELVHAVDEQTMLQNQWQAQAYEATIQALDPLLSQATTQAGHLLHFAVHGRSQPNARIQEII
LADNNAISAKALVGNTRRRPPQFSFVFINACQVATPGQSLGQAAGFPAEILKSGAAGFVAPLWEADDQAAGTFAAQFYSQ
AFQAQPLGAILQQYRLSYVANSTTTRLAYIFYGHPALRLAYSSKGATHAQQPSAA
>Mature_614_residues
SSRSINRRLLVLQAGWTVAQAQLLLAHSQAEYVVVQRTEPQIYWYVYPLEVVQERLSYHHPDIAIYLALNLQETSASSTL
NSNQLETADYLSVVLDDQQHLQGVVNPSAQAKGTEFDPFFKAYPSVVAQNQAQLNQAFDLAVGFRDTPDAGLIGGHNPIV
IHGLQTDERCTIMLSGDGLQFDREQAELAFDIQATVFFKATPTRTGRCVIYVDYYRQRQLVGHAERVVLVDSNAEPEPSN
ASPFDFGSTPVDLLINLRRDGDTFKWTAMPHDQAFTPVHNLPSQQALSEQAAQNCAVDLLGAAVNPSLLLAQRELEALAS
DLGQFVPSPIWQLHSDLAQKLQRPLTVLLRSNDLALPWELAMVEAPLLAGDQPLYWAAQTHFARWYIHPQVSPMPPDQLN
ISQISAIASRYGWDSGQAELVHAVDEQTMLQNQWQAQAYEATIQALDPLLSQATTQAGHLLHFAVHGRSQPNARIQEIIL
ADNNAISAKALVGNTRRRPPQFSFVFINACQVATPGQSLGQAAGFPAEILKSGAAGFVAPLWEADDQAAGTFAAQFYSQA
FQAQPLGAILQQYRLSYVANSTTTRLAYIFYGHPALRLAYSSKGATHAQQPSAA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 67657; Mature: 67526

Theoretical pI: Translated: 5.37; Mature: 5.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSRSINRRLLVLQAGWTVAQAQLLLAHSQAEYVVVQRTEPQIYWYVYPLEVVQERLSYH
CCCCCCCCEEEEEECCCHHHHHHHHEEECCCCEEEEEECCCEEEEEEEEHHHHHHHHHCC
HPDIAIYLALNLQETSASSTLNSNQLETADYLSVVLDDQQHLQGVVNPSAQAKGTEFDPF
CCCEEEEEEEEEECCCCCCCCCCCCCCHHHHHHEEECCHHHHHHHCCCCCCCCCCCCCHH
FKAYPSVVAQNQAQLNQAFDLAVGFRDTPDAGLIGGHNPIVIHGLQTDERCTIMLSGDGL
HHHHHHHHHCCHHHHHHHHHEEECCCCCCCCCEECCCCCEEEEECCCCCEEEEEECCCCC
QFDREQAELAFDIQATVFFKATPTRTGRCVIYVDYYRQRQLVGHAERVVLVDSNAEPEPS
CCCCCCCCEEEEEEEEEEEEECCCCCCCEEEEEEHHHHHHHHCCCCEEEEECCCCCCCCC
NASPFDFGSTPVDLLINLRRDGDTFKWTAMPHDQAFTPVHNLPSQQALSEQAAQNCAVDL
CCCCCCCCCCCHHEEEEEECCCCEEEEEECCCCCCCCCHHCCCHHHHHHHHHHHHHHHHH
LGAAVNPSLLLAQRELEALASDLGQFVPSPIWQLHSDLAQKLQRPLTVLLRSNDLALPWE
HHCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCEE
LAMVEAPLLAGDQPLYWAAQTHFARWYIHPQVSPMPPDQLNISQISAIASRYGWDSGQAE
HHEEECCCCCCCCCEEEEEECCEEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCCCHH
LVHAVDEQTMLQNQWQAQAYEATIQALDPLLSQATTQAGHLLHFAVHGRSQPNARIQEII
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCEEEEE
LADNNAISAKALVGNTRRRPPQFSFVFINACQVATPGQSLGQAAGFPAEILKSGAAGFVA
EECCCCCEEHEEECCCCCCCCCEEEEEEEEEECCCCCHHHHHCCCCCHHHHHCCCCCCEE
PLWEADDQAAGTFAAQFYSQAFQAQPLGAILQQYRLSYVANSTTTRLAYIFYGHPALRLA
ECCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCEEEEEEEECCCEEEEE
YSSKGATHAQQPSAA
ECCCCCCCCCCCCCC
>Mature Secondary Structure 
SSRSINRRLLVLQAGWTVAQAQLLLAHSQAEYVVVQRTEPQIYWYVYPLEVVQERLSYH
CCCCCCCEEEEEECCCHHHHHHHHEEECCCCEEEEEECCCEEEEEEEEHHHHHHHHHCC
HPDIAIYLALNLQETSASSTLNSNQLETADYLSVVLDDQQHLQGVVNPSAQAKGTEFDPF
CCCEEEEEEEEEECCCCCCCCCCCCCCHHHHHHEEECCHHHHHHHCCCCCCCCCCCCCHH
FKAYPSVVAQNQAQLNQAFDLAVGFRDTPDAGLIGGHNPIVIHGLQTDERCTIMLSGDGL
HHHHHHHHHCCHHHHHHHHHEEECCCCCCCCCEECCCCCEEEEECCCCCEEEEEECCCCC
QFDREQAELAFDIQATVFFKATPTRTGRCVIYVDYYRQRQLVGHAERVVLVDSNAEPEPS
CCCCCCCCEEEEEEEEEEEEECCCCCCCEEEEEEHHHHHHHHCCCCEEEEECCCCCCCCC
NASPFDFGSTPVDLLINLRRDGDTFKWTAMPHDQAFTPVHNLPSQQALSEQAAQNCAVDL
CCCCCCCCCCCHHEEEEEECCCCEEEEEECCCCCCCCCHHCCCHHHHHHHHHHHHHHHHH
LGAAVNPSLLLAQRELEALASDLGQFVPSPIWQLHSDLAQKLQRPLTVLLRSNDLALPWE
HHCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCEE
LAMVEAPLLAGDQPLYWAAQTHFARWYIHPQVSPMPPDQLNISQISAIASRYGWDSGQAE
HHEEECCCCCCCCCEEEEEECCEEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCCCHH
LVHAVDEQTMLQNQWQAQAYEATIQALDPLLSQATTQAGHLLHFAVHGRSQPNARIQEII
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCEEEEE
LADNNAISAKALVGNTRRRPPQFSFVFINACQVATPGQSLGQAAGFPAEILKSGAAGFVA
EECCCCCEEHEEECCCCCCCCCEEEEEEEEEECCCCCHHHHHCCCCCHHHHHCCCCCCEE
PLWEADDQAAGTFAAQFYSQAFQAQPLGAILQQYRLSYVANSTTTRLAYIFYGHPALRLA
ECCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCEEEEEEEECCCEEEEE
YSSKGATHAQQPSAA
ECCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA