Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
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Accession | NC_009972 |
Length | 6,346,587 |
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The map label for this gene is 159899529
Identifier: 159899529
GI number: 159899529
Start: 3801840
End: 3802931
Strand: Direct
Name: 159899529
Synonym: Haur_3010
Alternate gene names: NA
Gene position: 3801840-3802931 (Clockwise)
Preceding gene: 159899526
Following gene: 159899530
Centisome position: 59.9
GC content: 51.19
Gene sequence:
>1092_bases ATGGCCTCAATCGGACGGATTGGTCGGAATGTTTCGAGTTTGCCTCGCCCAGACGAATATCCACCATCAAGTATCACCTT TGATTTTATGTCAATGGTCTTTGCAGCGTGGTGGCTGATTGGCTTGTTCGCTGATGGCGCAGCCCATGCTGCTAACGCCG TGGATACCTTCTTCACCCCATGGCACTTGATTCTCTACTCAGGCTTTTTGGCGGTAGCCTTGTGGATCGGTGGGCTGCAA CTGCGCAATATGTACAAAGGCTATACACTTTGGCGAGCCTTGCCGCGTGGCTATTTGCTGGCACTCGTGGGCATCATTTT ATTTGCGATTGCCGCCCCACTTGATTTTATTTGGCATGATGTGTTTGGCTTTGAGTTGCGGCTTGATGCTTTGCTCAGCC CGCCGCACTTGATGCTAATTTCTGGCGCGATGTTATTTGGAACCGCTCCATTGCGCACCGCCTGGATTCGCATGCAGCAA GGCGAAAAATTAGCAGGCTGGAGGGGCGGATTAGCGCCAATGGTGATGTCGCTGTTTTTTCTCATGGTCACGACTGCCTT TATGACTCAATATGCCCATCCTTTGGCCTCACCCAAATGGCTCTCATTGCCCTATGTTGGTGCACCAGAAATTGAGATGT ATCGGGCTGACCTGTGGGGCATCGCCTCAGCCCATATCAGCACCTTCGTCTTAATTAGCATTTTGCTGCTATCGTTGCGT TTCTGGCCCTTACCATTTGGCTCGATCACGCTGCTGGTCGGTGGCAGTATGTTCTTGCTGTGGGCGATGCGGGCCTCCCG CGTTATGCAATATTGGCCTGTTTTAGTGTGGGCCGTGGTGATTGGCCTTGCTGCCGATTGCGCTATGCACTATTGGAAGA TCGATCGTCATAATCGCTTAGGCATTCGCTTGTTATGTAGTTTATTGCCCGCTGGCTTCTTCCTAGGCTATTACCTAATT ATTATGGCTGGGCCTGGCCTCACCTGGATTACCCATATGTGGACAGGCATGATTTTCGAGGTAGCAATTGTTGGCTTGAT TCTGAGTTTCTTGGTGGCTCCACCCTACGAAGCACCGAGCAAAGCTGCCTAA
Upstream 100 bases:
>100_bases CGACATCGACCAGTAGCAGCATTTCCCCCATGCTTGTGGAAAGGCTACCACCCCACGTATCCGCAGCGGTCTGACACTAT CAAGAATTAGGGGGTTTGAT
Downstream 100 bases:
>100_bases ATCAATCGGTTAGAAAGTTCAAACGCACTCCATTCGTCGATGGAGTGCGTTTAATTTAAGTGTAGGAAAACTAGGCTCAA TAGCACCTTTTGGTTTACTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 363; Mature: 362
Protein sequence:
>363_residues MASIGRIGRNVSSLPRPDEYPPSSITFDFMSMVFAAWWLIGLFADGAAHAANAVDTFFTPWHLILYSGFLAVALWIGGLQ LRNMYKGYTLWRALPRGYLLALVGIILFAIAAPLDFIWHDVFGFELRLDALLSPPHLMLISGAMLFGTAPLRTAWIRMQQ GEKLAGWRGGLAPMVMSLFFLMVTTAFMTQYAHPLASPKWLSLPYVGAPEIEMYRADLWGIASAHISTFVLISILLLSLR FWPLPFGSITLLVGGSMFLLWAMRASRVMQYWPVLVWAVVIGLAADCAMHYWKIDRHNRLGIRLLCSLLPAGFFLGYYLI IMAGPGLTWITHMWTGMIFEVAIVGLILSFLVAPPYEAPSKAA
Sequences:
>Translated_363_residues MASIGRIGRNVSSLPRPDEYPPSSITFDFMSMVFAAWWLIGLFADGAAHAANAVDTFFTPWHLILYSGFLAVALWIGGLQ LRNMYKGYTLWRALPRGYLLALVGIILFAIAAPLDFIWHDVFGFELRLDALLSPPHLMLISGAMLFGTAPLRTAWIRMQQ GEKLAGWRGGLAPMVMSLFFLMVTTAFMTQYAHPLASPKWLSLPYVGAPEIEMYRADLWGIASAHISTFVLISILLLSLR FWPLPFGSITLLVGGSMFLLWAMRASRVMQYWPVLVWAVVIGLAADCAMHYWKIDRHNRLGIRLLCSLLPAGFFLGYYLI IMAGPGLTWITHMWTGMIFEVAIVGLILSFLVAPPYEAPSKAA >Mature_362_residues ASIGRIGRNVSSLPRPDEYPPSSITFDFMSMVFAAWWLIGLFADGAAHAANAVDTFFTPWHLILYSGFLAVALWIGGLQL RNMYKGYTLWRALPRGYLLALVGIILFAIAAPLDFIWHDVFGFELRLDALLSPPHLMLISGAMLFGTAPLRTAWIRMQQG EKLAGWRGGLAPMVMSLFFLMVTTAFMTQYAHPLASPKWLSLPYVGAPEIEMYRADLWGIASAHISTFVLISILLLSLRF WPLPFGSITLLVGGSMFLLWAMRASRVMQYWPVLVWAVVIGLAADCAMHYWKIDRHNRLGIRLLCSLLPAGFFLGYYLII MAGPGLTWITHMWTGMIFEVAIVGLILSFLVAPPYEAPSKAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40496; Mature: 40365
Theoretical pI: Translated: 9.40; Mature: 9.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 5.2 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 5.0 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASIGRIGRNVSSLPRPDEYPPSSITFDFMSMVFAAWWLIGLFADGAAHAANAVDTFFTP CCCHHHHCCCHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH WHLILYSGFLAVALWIGGLQLRNMYKGYTLWRALPRGYLLALVGIILFAIAAPLDFIWHD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VFGFELRLDALLSPPHLMLISGAMLFGTAPLRTAWIRMQQGEKLAGWRGGLAPMVMSLFF HHHHHEEHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHH LMVTTAFMTQYAHPLASPKWLSLPYVGAPEIEMYRADLWGIASAHISTFVLISILLLSLR HHHHHHHHHHHHHHCCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FWPLPFGSITLLVGGSMFLLWAMRASRVMQYWPVLVWAVVIGLAADCAMHYWKIDRHNRL HCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH GIRLLCSLLPAGFFLGYYLIIMAGPGLTWITHMWTGMIFEVAIVGLILSFLVAPPYEAPS HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC KAA CCC >Mature Secondary Structure ASIGRIGRNVSSLPRPDEYPPSSITFDFMSMVFAAWWLIGLFADGAAHAANAVDTFFTP CCHHHHCCCHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH WHLILYSGFLAVALWIGGLQLRNMYKGYTLWRALPRGYLLALVGIILFAIAAPLDFIWHD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VFGFELRLDALLSPPHLMLISGAMLFGTAPLRTAWIRMQQGEKLAGWRGGLAPMVMSLFF HHHHHEEHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHH LMVTTAFMTQYAHPLASPKWLSLPYVGAPEIEMYRADLWGIASAHISTFVLISILLLSLR HHHHHHHHHHHHHHCCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FWPLPFGSITLLVGGSMFLLWAMRASRVMQYWPVLVWAVVIGLAADCAMHYWKIDRHNRL HCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH GIRLLCSLLPAGFFLGYYLIIMAGPGLTWITHMWTGMIFEVAIVGLILSFLVAPPYEAPS HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC KAA CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA