Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
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Accession | NC_009972 |
Length | 6,346,587 |
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The map label for this gene is 159899530
Identifier: 159899530
GI number: 159899530
Start: 3803180
End: 3804265
Strand: Direct
Name: 159899530
Synonym: Haur_3011
Alternate gene names: NA
Gene position: 3803180-3804265 (Clockwise)
Preceding gene: 159899529
Following gene: 159899535
Centisome position: 59.92
GC content: 50.09
Gene sequence:
>1086_bases ATGGCAACGGTCGGCCCAACCAAAACCACTGCATCACGGCTGAATCCGGCCCCTACGGGCTATCCGCCATTCAGCAAGCG CCTTGATGTTTTGTGCATCGTCTTCAGCATTTGGCTACTGATTGGCCTGTTTATTGATGGTTTGGCCCATGCCGAGCAAT TGATCGATACGTTTTTCTCGCCGTGGCATGCCGTGCTTTATTCGGGTTTTCTGGGCATTACAACCGTGATTGGCACAGTC CAAATTCGCAATATGTACCGCCAATACCCGCTCACCAAAGCACTGCCGCAAGGCTATTTCCCCGCACTGCTTGGGATTAT CCTCTTTTCGTTTGCGGCTCCACTCGATTTGATGTGGCATGAATGGTTTGGTTTTGAGTTACGGCTTGATGCCTTATTCA GCCCACCGCATTTGATGATTATCAGCGGCGCGATGTTGTTTGGCACTGCTCCGTTACGCACTGCCTGGCTCCAAACCCAA GCGGGCGCAAATCTGCGGGGCTGGCGTGATTTGGGCACAATGGTGATGTCACTGTTTTTCTTGATGGCTGCCGTCAGTTT CTTTACCCAATATGCTAGCCCCATTGTGAATGCGCCATTTCTCTCCGAACCGTACCTTGAATCAACCATGTCGAATATTG ATATGCGCGGCATCAGCACTGGCATTATCACCACGCTGGTGTTGATTGGAATTTTGCTGCTCTCGCTGCGTTTCTGGCCC TTACCATTCGGGGCAATGACGTTATTAATTGGTGGCAGCACTGGCCTGATTTGGTTTGTCCACAATCAAAGTTCGCAAGC CTATTGGCCAGTGGTCGTTTGGGCAGCAATTGTCGGCTTGCTCGCTGATATTGCAATGCATACGTGGCAGATCAATCAAC AGCGACCCTTGGCGGTGCGCTTGGTCTGTAGCCTGCTGCCAGCAAGCTTGTTTCTTGGTTACTACTTGATCATTATGGCT AGTATGGGTCTAAACTGGATTACCCATATGTGGACTGGCATGGTCTTTGAGGTGGCTATTTTGGGCTTTTGCTTGAGCTT AATCGCGATTCCACCCTATTCGAAGAACATAGCACATAGAACATAA
Upstream 100 bases:
>100_bases GGCATATCTTATGACAAGGCGGTCGAGCCATTCTTGCAATTAGCATCCAAGCTGCTAGCTCTTTATCGCCGCCGCACTAT CAACCTCAAGGAGGCCAAGA
Downstream 100 bases:
>100_bases ACCATATTTGATTTGGCGATTGGCTTTATAAGTATAACCTTTCGAGCCAATTGCCCTCTATAATTTATACTCTCTATGCT TGCTTACTCTACATCTTTTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 361; Mature: 360
Protein sequence:
>361_residues MATVGPTKTTASRLNPAPTGYPPFSKRLDVLCIVFSIWLLIGLFIDGLAHAEQLIDTFFSPWHAVLYSGFLGITTVIGTV QIRNMYRQYPLTKALPQGYFPALLGIILFSFAAPLDLMWHEWFGFELRLDALFSPPHLMIISGAMLFGTAPLRTAWLQTQ AGANLRGWRDLGTMVMSLFFLMAAVSFFTQYASPIVNAPFLSEPYLESTMSNIDMRGISTGIITTLVLIGILLLSLRFWP LPFGAMTLLIGGSTGLIWFVHNQSSQAYWPVVVWAAIVGLLADIAMHTWQINQQRPLAVRLVCSLLPASLFLGYYLIIMA SMGLNWITHMWTGMVFEVAILGFCLSLIAIPPYSKNIAHRT
Sequences:
>Translated_361_residues MATVGPTKTTASRLNPAPTGYPPFSKRLDVLCIVFSIWLLIGLFIDGLAHAEQLIDTFFSPWHAVLYSGFLGITTVIGTV QIRNMYRQYPLTKALPQGYFPALLGIILFSFAAPLDLMWHEWFGFELRLDALFSPPHLMIISGAMLFGTAPLRTAWLQTQ AGANLRGWRDLGTMVMSLFFLMAAVSFFTQYASPIVNAPFLSEPYLESTMSNIDMRGISTGIITTLVLIGILLLSLRFWP LPFGAMTLLIGGSTGLIWFVHNQSSQAYWPVVVWAAIVGLLADIAMHTWQINQQRPLAVRLVCSLLPASLFLGYYLIIMA SMGLNWITHMWTGMVFEVAILGFCLSLIAIPPYSKNIAHRT >Mature_360_residues ATVGPTKTTASRLNPAPTGYPPFSKRLDVLCIVFSIWLLIGLFIDGLAHAEQLIDTFFSPWHAVLYSGFLGITTVIGTVQ IRNMYRQYPLTKALPQGYFPALLGIILFSFAAPLDLMWHEWFGFELRLDALFSPPHLMIISGAMLFGTAPLRTAWLQTQA GANLRGWRDLGTMVMSLFFLMAAVSFFTQYASPIVNAPFLSEPYLESTMSNIDMRGISTGIITTLVLIGILLLSLRFWPL PFGAMTLLIGGSTGLIWFVHNQSSQAYWPVVVWAAIVGLLADIAMHTWQINQQRPLAVRLVCSLLPASLFLGYYLIIMAS MGLNWITHMWTGMVFEVAILGFCLSLIAIPPYSKNIAHRT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40130; Mature: 39999
Theoretical pI: Translated: 8.76; Mature: 8.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATVGPTKTTASRLNPAPTGYPPFSKRLDVLCIVFSIWLLIGLFIDGLAHAEQLIDTFFS CCCCCCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH PWHAVLYSGFLGITTVIGTVQIRNMYRQYPLTKALPQGYFPALLGIILFSFAAPLDLMWH HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCHHHHHHHHHHHHHHCHHHHHHH EWFGFELRLDALFSPPHLMIISGAMLFGTAPLRTAWLQTQAGANLRGWRDLGTMVMSLFF HHCCCEEEEECCCCCCCCHHEECHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH LMAAVSFFTQYASPIVNAPFLSEPYLESTMSNIDMRGISTGIITTLVLIGILLLSLRFWP HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCC LPFGAMTLLIGGSTGLIWFVHNQSSQAYWPVVVWAAIVGLLADIAMHTWQINQQRPLAVR CCHHHHHHEEECCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH LVCSLLPASLFLGYYLIIMASMGLNWITHMWTGMVFEVAILGFCLSLIAIPPYSKNIAHR HHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC T C >Mature Secondary Structure ATVGPTKTTASRLNPAPTGYPPFSKRLDVLCIVFSIWLLIGLFIDGLAHAEQLIDTFFS CCCCCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH PWHAVLYSGFLGITTVIGTVQIRNMYRQYPLTKALPQGYFPALLGIILFSFAAPLDLMWH HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCHHHHHHHHHHHHHHCHHHHHHH EWFGFELRLDALFSPPHLMIISGAMLFGTAPLRTAWLQTQAGANLRGWRDLGTMVMSLFF HHCCCEEEEECCCCCCCCHHEECHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH LMAAVSFFTQYASPIVNAPFLSEPYLESTMSNIDMRGISTGIITTLVLIGILLLSLRFWP HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCC LPFGAMTLLIGGSTGLIWFVHNQSSQAYWPVVVWAAIVGLLADIAMHTWQINQQRPLAVR CCHHHHHHEEECCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH LVCSLLPASLFLGYYLIIMASMGLNWITHMWTGMVFEVAILGFCLSLIAIPPYSKNIAHR HHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC T C
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA