Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
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Accession | NC_009972 |
Length | 6,346,587 |
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The map label for this gene is 159899487
Identifier: 159899487
GI number: 159899487
Start: 3743912
End: 3745663
Strand: Direct
Name: 159899487
Synonym: Haur_2968
Alternate gene names: NA
Gene position: 3743912-3745663 (Clockwise)
Preceding gene: 159899486
Following gene: 159899492
Centisome position: 58.99
GC content: 50.0
Gene sequence:
>1752_bases ATGGCCCATGTTGGCGCTCAATCCATTCTTGGTGAACGTGAAGCTGAGCTACGCGCTGCCGAGCAAAGCTTATTTGATCG TTTGCATCATGCGTTGGAGCAATTTGGCGCTGATGTGACCGCCACTGATGCTGCTCGTTTGCGCGAAGCCACTGAACAAC TGGCCGAACTCTTTTTAATTGTGGTTGCTGGCGAGTTCAACGCTGGTAAATCGAGCTTTATCAATGCCTTGCTCGGCGAT CGTGTGTTGCCTGAAGGGGTTACGCCAACCACCGATCGCATTAATATTTTGCGTTTTGGCGAGCAACCAGATTCGCAATT GCTCGAAGATTTTCTGTTGTTGCGCACCCATCCTGCGCCGTTACTTGGCGATTTGAATATCGTCGATACGCCTGGCACGA ATGCAATTATTCGTCGTCACGAGGAATTGACTAAACGCTTTGTGCCACGTTCGGATCTGGTTTTGTTTATCACGTCAGCC GATCGGCCTTTTACCGAGAGCGAGCGCACCTTCCTCGAGCATATTCGCGAATGGGGCAAAAAAATCGTCTTGGTGATCAA TAAAATTGATATTCTCGATGAAAAAGGTCGCGGCGAGGTCATCGAATTTGTGCGCAGCAATGCCACCACCTTGCTTGGCA GCACCCCGATGATTTTTGCGGTTTCGGCTCGCTCGGCCTTACGCGCCCGCGAGAACGATGACCCCAAGCTCTGGGCCGAA AGTGGCTTCAACGCCATGGAAGAATATTTGCTGCGCACGCTTGATCAAGGTGAACGGGTACGGCTCAAATTGCTCAATCC CTTGGGCGTTGGCCAAAAGCTAGCCACAACCTATCGCACTGCTTCCGACGAGCGCTTGCACACCCTAAGCGAAGATATCA AGGCGATCAACAATATCGAGGGCCAAATTCAGGTTTACAAAGCTGATATGCAACGTGATTTCACGCCGCGGATTGCCCAG CTCGAAAATTTGATTCACGAATTTGAGCAGCGTGGCCATAGCTTTTTCGATGAACAAATTCGTTTGGGCCGAGCACGCGA TTTAATCAAAAAAGATTTGCTTGAACAACGCTTTCGCGATCAAGTGGTGGGCGATCTCGATGCTGAAACTGATCGCATTA CCCAGCAAATTATTGATTGGTTGATCGAGCGCAATCTCAAATTGTGGCAAGACGTTAATGCTTATATCGATCGTCGCCAA ATTTCGCGCCATAAAGATGAGATGGTTGGCAACGTTGGCCAAAATTTCAACTACAACCGTCAATCGTTGATCGATTCGGT TGGTCGTAGCACCAGCCAAATTGTGCAAAGCTACAATCGTGATGCTGAAGCCAAACAATTAGCCATGGATTTGCAAGGCA CAATTGCTACAACCGCCTTGACTGGCGTTGGCGCGGTCGGCTTTGGCGCATTATTTGTGATTTTGGCGCACGGCGCGTTA CTCGATTTTACCGGCATCAGCTTGAGTGTGTTGGCAGTTGCAGGCGGAGCCTATTTGATTCCGGCCAAACGCGCCCAGGC CAAGCGCGAGTTTCACAAAAAAGTTAGCGAACTGCGCGATAAAATTGTGCGCTCGTTGAGCAAACAAGTCTATGCTGAAA TCGATCAATCGATCGAGCGGGTGACTGAAACCGTTGCGCCGTACACTCGCTTCGTCAAATTCCAAAATGAGCAACTGCAA CACGCTCGCAACGAACTAGCCAGCGTTGAGCAAGCGCTTGGTCGTTTGCGCGGCGAAATAGAGGCTTTGTAG
Upstream 100 bases:
>100_bases TGGCACGAGTTGTGATTAATCAACAGCATCATTGCAACTTTAGATAAACAATCGCAGTCAGATTGAGTAGCACCCTACTC ATAGAGATAAGGACCAATCC
Downstream 100 bases:
>100_bases CCAACAAACTCCAGCGCCAAACCAGCTTCAGGCTTGGCGCTGGGTTTACCACAAGAATTAACGGGTATAGATCAGCACCT GTTTTGGTTGTAGAGCACAA
Product: dynamin family protein
Products: NA
Alternate protein names: ORF6 [H]
Number of amino acids: Translated: 583; Mature: 582
Protein sequence:
>583_residues MAHVGAQSILGEREAELRAAEQSLFDRLHHALEQFGADVTATDAARLREATEQLAELFLIVVAGEFNAGKSSFINALLGD RVLPEGVTPTTDRINILRFGEQPDSQLLEDFLLLRTHPAPLLGDLNIVDTPGTNAIIRRHEELTKRFVPRSDLVLFITSA DRPFTESERTFLEHIREWGKKIVLVINKIDILDEKGRGEVIEFVRSNATTLLGSTPMIFAVSARSALRARENDDPKLWAE SGFNAMEEYLLRTLDQGERVRLKLLNPLGVGQKLATTYRTASDERLHTLSEDIKAINNIEGQIQVYKADMQRDFTPRIAQ LENLIHEFEQRGHSFFDEQIRLGRARDLIKKDLLEQRFRDQVVGDLDAETDRITQQIIDWLIERNLKLWQDVNAYIDRRQ ISRHKDEMVGNVGQNFNYNRQSLIDSVGRSTSQIVQSYNRDAEAKQLAMDLQGTIATTALTGVGAVGFGALFVILAHGAL LDFTGISLSVLAVAGGAYLIPAKRAQAKREFHKKVSELRDKIVRSLSKQVYAEIDQSIERVTETVAPYTRFVKFQNEQLQ HARNELASVEQALGRLRGEIEAL
Sequences:
>Translated_583_residues MAHVGAQSILGEREAELRAAEQSLFDRLHHALEQFGADVTATDAARLREATEQLAELFLIVVAGEFNAGKSSFINALLGD RVLPEGVTPTTDRINILRFGEQPDSQLLEDFLLLRTHPAPLLGDLNIVDTPGTNAIIRRHEELTKRFVPRSDLVLFITSA DRPFTESERTFLEHIREWGKKIVLVINKIDILDEKGRGEVIEFVRSNATTLLGSTPMIFAVSARSALRARENDDPKLWAE SGFNAMEEYLLRTLDQGERVRLKLLNPLGVGQKLATTYRTASDERLHTLSEDIKAINNIEGQIQVYKADMQRDFTPRIAQ LENLIHEFEQRGHSFFDEQIRLGRARDLIKKDLLEQRFRDQVVGDLDAETDRITQQIIDWLIERNLKLWQDVNAYIDRRQ ISRHKDEMVGNVGQNFNYNRQSLIDSVGRSTSQIVQSYNRDAEAKQLAMDLQGTIATTALTGVGAVGFGALFVILAHGAL LDFTGISLSVLAVAGGAYLIPAKRAQAKREFHKKVSELRDKIVRSLSKQVYAEIDQSIERVTETVAPYTRFVKFQNEQLQ HARNELASVEQALGRLRGEIEAL >Mature_582_residues AHVGAQSILGEREAELRAAEQSLFDRLHHALEQFGADVTATDAARLREATEQLAELFLIVVAGEFNAGKSSFINALLGDR VLPEGVTPTTDRINILRFGEQPDSQLLEDFLLLRTHPAPLLGDLNIVDTPGTNAIIRRHEELTKRFVPRSDLVLFITSAD RPFTESERTFLEHIREWGKKIVLVINKIDILDEKGRGEVIEFVRSNATTLLGSTPMIFAVSARSALRARENDDPKLWAES GFNAMEEYLLRTLDQGERVRLKLLNPLGVGQKLATTYRTASDERLHTLSEDIKAINNIEGQIQVYKADMQRDFTPRIAQL ENLIHEFEQRGHSFFDEQIRLGRARDLIKKDLLEQRFRDQVVGDLDAETDRITQQIIDWLIERNLKLWQDVNAYIDRRQI SRHKDEMVGNVGQNFNYNRQSLIDSVGRSTSQIVQSYNRDAEAKQLAMDLQGTIATTALTGVGAVGFGALFVILAHGALL DFTGISLSVLAVAGGAYLIPAKRAQAKREFHKKVSELRDKIVRSLSKQVYAEIDQSIERVTETVAPYTRFVKFQNEQLQH ARNELASVEQALGRLRGEIEAL
Specific function: Unknown
COG id: COG0699
COG function: function code R; Predicted GTPases (dynamin-related)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To M.genitalium MG148 [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001401 [H]
Pfam domain/function: PF00350 Dynamin_N [H]
EC number: NA
Molecular weight: Translated: 65754; Mature: 65622
Theoretical pI: Translated: 5.97; Mature: 5.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAHVGAQSILGEREAELRAAEQSLFDRLHHALEQFGADVTATDAARLREATEQLAELFLI CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH VVAGEFNAGKSSFINALLGDRVLPEGVTPTTDRINILRFGEQPDSQLLEDFLLLRTHPAP HEECCCCCCHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHCCCCC LLGDLNIVDTPGTNAIIRRHEELTKRFVPRSDLVLFITSADRPFTESERTFLEHIREWGK CCCCCEEECCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHCH KIVLVINKIDILDEKGRGEVIEFVRSNATTLLGSTPMIFAVSARSALRARENDDPKLWAE HEEEEEEHHHHCCCCCCHHHHHHHHCCCHHEECCCCEEEEECHHHHHHHCCCCCCCHHHH SGFNAMEEYLLRTLDQGERVRLKLLNPLGVGQKLATTYRTASDERLHTLSEDIKAINNIE CCHHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCC GQIQVYKADMQRDFTPRIAQLENLIHEFEQRGHSFFDEQIRLGRARDLIKKDLLEQRFRD CEEEEEEEHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QVVGDLDAETDRITQQIIDWLIERNLKLWQDVNAYIDRRQISRHKDEMVGNVGQNFNYNR HHHCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCH QSLIDSVGRSTSQIVQSYNRDAEAKQLAMDLQGTIATTALTGVGAVGFGALFVILAHGAL HHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCHH LDFTGISLSVLAVAGGAYLIPAKRAQAKREFHKKVSELRDKIVRSLSKQVYAEIDQSIER HHHCCCHHHHHHHCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VTETVAPYTRFVKFQNEQLQHARNELASVEQALGRLRGEIEAL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure AHVGAQSILGEREAELRAAEQSLFDRLHHALEQFGADVTATDAARLREATEQLAELFLI CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH VVAGEFNAGKSSFINALLGDRVLPEGVTPTTDRINILRFGEQPDSQLLEDFLLLRTHPAP HEECCCCCCHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHCCCCC LLGDLNIVDTPGTNAIIRRHEELTKRFVPRSDLVLFITSADRPFTESERTFLEHIREWGK CCCCCEEECCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHCH KIVLVINKIDILDEKGRGEVIEFVRSNATTLLGSTPMIFAVSARSALRARENDDPKLWAE HEEEEEEHHHHCCCCCCHHHHHHHHCCCHHEECCCCEEEEECHHHHHHHCCCCCCCHHHH SGFNAMEEYLLRTLDQGERVRLKLLNPLGVGQKLATTYRTASDERLHTLSEDIKAINNIE CCHHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCC GQIQVYKADMQRDFTPRIAQLENLIHEFEQRGHSFFDEQIRLGRARDLIKKDLLEQRFRD CEEEEEEEHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QVVGDLDAETDRITQQIIDWLIERNLKLWQDVNAYIDRRQISRHKDEMVGNVGQNFNYNR HHHCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCH QSLIDSVGRSTSQIVQSYNRDAEAKQLAMDLQGTIATTALTGVGAVGFGALFVILAHGAL HHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCHH LDFTGISLSVLAVAGGAYLIPAKRAQAKREFHKKVSELRDKIVRSLSKQVYAEIDQSIER HHHCCCHHHHHHHCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VTETVAPYTRFVKFQNEQLQHARNELASVEQALGRLRGEIEAL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8920183 [H]