Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
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Accession | NC_009972 |
Length | 6,346,587 |
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The map label for this gene is cusR [C]
Identifier: 159899486
GI number: 159899486
Start: 3742888
End: 3743544
Strand: Direct
Name: cusR [C]
Synonym: Haur_2967
Alternate gene names: 159899486
Gene position: 3742888-3743544 (Clockwise)
Preceding gene: 159899474
Following gene: 159899487
Centisome position: 58.97
GC content: 51.14
Gene sequence:
>657_bases ATGAGCGATCAGCCAGTGCCATCGCTAACAATTAAGAACCAAGATGTGCCACCGCGACTTATGTCATGGGAACAAACCAT TCTCACCATCGGACGCGATGTGGCCAACGATATTGTCATCGATCATCGTTTAGCATCGCGCCGTCACGCCCGCTTGGAAC GCGATGAAGCCGGCTGTTATATTCGCGATCTCGATAGCACCAACGGAACTTATTTAAATGGGGTTAAGGTCAATGGCCTC GCACCCTTACGCAATAACGACGAAGTTTGGGTCGCCGATACGGTGATCATTTTTCGCGATCCCGAAGCAACTATGAAAGG CACGCCGCCGCCTGTGGTGATGCATCGGATCGCCACCCAAGATCAAGCTGAATTGCACGTTGATAGTGCTGCCAAGGAAG TTTATGTGCGGGGTAAACGGCTTGACCCACAACTCACCGCCAAGGAATTTCAGCTGCTAGAGCTGCTCTACAATCGCCGT GGCGAGGTCGTGAGTAAAGAGCAAATTGCGATTGGCGTGTGGGATTATGAGGTCTACGATTACAATGCCATCGACGCTTT GATCTATCGTTTGCGCCAACGCATCGAGATCGATCCATCTGCGCCACGCTTTGTGCTGACTGTGCGCGGCTTTGGCTATA AATTGAGCTTAGATTAA
Upstream 100 bases:
>100_bases GTCACATTCTATCATAGCCCTTTTGCTTTGTCTCTGACTAAGACTCTAGCATACCATACCACGCCTCTCCATGCATCGTG TGTTTGAGGAGGAATTTTTT
Downstream 100 bases:
>100_bases AGCCCTCACCGCCTTAGCCTCCTCCTTACGAGGGTAGGTTTTTACTCGTTTTCCGTTGTGAACCACCAATCCTGTGGTTC ATCAATGGATGAATGATAGT
Product: winged helix family two component response transcriptional regulator
Products: NA
Alternate protein names: Two-Component Response Regulator; Two-Component System Response Regulator; Winged Helix Family Two Component Transcriptional Regulator; Response Regulator; Two-Component System OmpR Family Response Regulator; Two Component System Response Regulator; Heavy Metal Response Regulator; Transcriptional Regulatory Protein; Response Regulator Receiver; Response Regulator DrrA; Transcriptional Regulator Domain-Containing Protein
Number of amino acids: Translated: 218; Mature: 217
Protein sequence:
>218_residues MSDQPVPSLTIKNQDVPPRLMSWEQTILTIGRDVANDIVIDHRLASRRHARLERDEAGCYIRDLDSTNGTYLNGVKVNGL APLRNNDEVWVADTVIIFRDPEATMKGTPPPVVMHRIATQDQAELHVDSAAKEVYVRGKRLDPQLTAKEFQLLELLYNRR GEVVSKEQIAIGVWDYEVYDYNAIDALIYRLRQRIEIDPSAPRFVLTVRGFGYKLSLD
Sequences:
>Translated_218_residues MSDQPVPSLTIKNQDVPPRLMSWEQTILTIGRDVANDIVIDHRLASRRHARLERDEAGCYIRDLDSTNGTYLNGVKVNGL APLRNNDEVWVADTVIIFRDPEATMKGTPPPVVMHRIATQDQAELHVDSAAKEVYVRGKRLDPQLTAKEFQLLELLYNRR GEVVSKEQIAIGVWDYEVYDYNAIDALIYRLRQRIEIDPSAPRFVLTVRGFGYKLSLD >Mature_217_residues SDQPVPSLTIKNQDVPPRLMSWEQTILTIGRDVANDIVIDHRLASRRHARLERDEAGCYIRDLDSTNGTYLNGVKVNGLA PLRNNDEVWVADTVIIFRDPEATMKGTPPPVVMHRIATQDQAELHVDSAAKEVYVRGKRLDPQLTAKEFQLLELLYNRRG EVVSKEQIAIGVWDYEVYDYNAIDALIYRLRQRIEIDPSAPRFVLTVRGFGYKLSLD
Specific function: Probable Member Of A Two-Component Regulatory System Ybcz/Ylca. [C]
COG id: COG0745
COG function: function code TK; Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1786784, Length=103, Percent_Identity=42.7184466019417, Blast_Score=66, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24888; Mature: 24756
Theoretical pI: Translated: 5.73; Mature: 5.73
Prosite motif: PS50006 FHA_DOMAIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDQPVPSLTIKNQDVPPRLMSWEQTILTIGRDVANDIVIDHRLASRRHARLERDEAGCY CCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHEEEHHHHHHHHHHHCCCCCCCCE IRDLDSTNGTYLNGVKVNGLAPLRNNDEVWVADTVIIFRDPEATMKGTPPPVVMHRIATQ EEECCCCCCCEEEEEEECCCCCCCCCCCEEEEEEEEEEECCCCCCCCCCCHHHHHHHCCC DQAELHVDSAAKEVYVRGKRLDPQLTAKEFQLLELLYNRRGEVVSKEQIAIGVWDYEVYD CCHHEEHHHHHHHHEEECCCCCCCCCHHHHHHHHHHHCCCCCEECCCEEEEEEEEEEEEC YNAIDALIYRLRQRIEIDPSAPRFVLTVRGFGYKLSLD CCHHHHHHHHHHHHCCCCCCCCEEEEEEECCCEEEECC >Mature Secondary Structure SDQPVPSLTIKNQDVPPRLMSWEQTILTIGRDVANDIVIDHRLASRRHARLERDEAGCY CCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHEEEHHHHHHHHHHHCCCCCCCCE IRDLDSTNGTYLNGVKVNGLAPLRNNDEVWVADTVIIFRDPEATMKGTPPPVVMHRIATQ EEECCCCCCCEEEEEEECCCCCCCCCCCEEEEEEEEEEECCCCCCCCCCCHHHHHHHCCC DQAELHVDSAAKEVYVRGKRLDPQLTAKEFQLLELLYNRRGEVVSKEQIAIGVWDYEVYD CCHHEEHHHHHHHHEEECCCCCCCCCHHHHHHHHHHHCCCCCEECCCEEEEEEEEEEEEC YNAIDALIYRLRQRIEIDPSAPRFVLTVRGFGYKLSLD CCHHHHHHHHHHHHCCCCCCCCEEEEEEECCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA