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The map label for this gene is ykoH [H]

Identifier: 159899459

GI number: 159899459

Start: 3715489

End: 3716760

Strand: Direct

Name: ykoH [H]

Synonym: Haur_2940

Alternate gene names: 159899459

Gene position: 3715489-3716760 (Clockwise)

Preceding gene: 159899458

Following gene: 159899461

Centisome position: 58.54

GC content: 47.88

Gene sequence:

>1272_bases
ATGAAGGATGGATGGGGCAATTTAGCGCAATCATGGTTCAACGCCTATCAACGCATCGGCCAACAACTTGATCCATTGCC
GTGGATTACATGGCTGATTGCCTGCTTTAGTGTGGGAGTCGGCGCTCTCGGCTTAACTGGCATCGATCAAACCGCGCCTA
AACTCTTAATTTGGATCGATTTTGGCCTAGCGTTGTATCTGTTTTGGCTGGGATGGGTGGTCTATCGCCGCCCAAACTTG
AGCTGGCCGCGCTGGCTGATTGTGCTCAGTATGACTTCAACCTGTTTGATCGCCCTCAGTATTGTCGAGCTTGAAAGCGC
CGCAGTCGTCTTGGTGACCGTGCCAATTTTGTTGGCAATTATCACGACCGGACGTTTATGGCCAATTATTAGTTATCCGG
CGTTTATGCTAATTGCGACACTGGTTCACCCTGCTGGCTGGAGTTTGTTTAACCCAGCGGTGATTGTGTTTAATTTGTTG
TTGTTTTTGACGATGTGGCAATTGCGCAGCTCGGCCAGCCGCGCCACCCAAATTCAGGTGTTGGCCAAAGCCCAGCTTGA
GCAAGAACAACAAGCGCGTCAATTTATTCGCTTTTTTCAGCACGAATTACGCGGCTATAGCAGTGGCTTAGAAGGTTTAG
TACCAATTTTTGAGCGTTTTTTGGCCAACGCGCCGCAACAAAATGCTGGTATTAGCAGTGACGAAGCCTTGAGTGCCCTC
GCCACCACAACCCAACATCTCAAGCAATTAACCACACAACTATTAATTTTAACTCGCGATGGGGTTTTACAACCCCAACA
ATTACAAACTCTCAATTTAGCCGAATTATTACAACAAATTGTCAATGAGGTGCGCACTTCACATCAGCTTGATGCTGAGC
ACCTGCGTTTGAGTTTATGCAAACAGCAACCAGTCTTGATTAAAGGCAATGATTTGTTTATTACTCTAGCCTTACGAACA
ATTATTCAAAATTCAATCGAGGCCAACCCAAGCTCAATCGCTGGACAACAGATTAGCCTTGAGTGCTGTACCAACAACGA
AATGGCCGTAATTAGCATTAGCGATCAAGGCGCTGGTTATCCCAACGAATTGCTGCAACGGCTCGCTACCAATCAGATTC
CGGCAGTGCTAGGCTGGAGCGGCAAACTTGGTGGCAATGGCCTAGGCTTGGCATTAATTATGCAGGTTGCTCGTTTGCAT
CAAGGCTCGGTTCGTTTTGAAAATCAAGCTCAAGGCGGCGCACGCACCAGTTTGGCCTTGCCGCGCATTTAG

Upstream 100 bases:

>100_bases
TCAGCGGCGTTGGCCTAGCGCAAACCCAAACAGCCTAGTGCTATGGCACGCCCACTGATGGCTTACAATCATGATAGTCG
CGGCTATCAGTGGAGCAATC

Downstream 100 bases:

>100_bases
GCAATGAGCTGATTGGTAGCCCATGGCACGGGCAAGCCCACACACGTCCAGCCTGCGCCATGCAAGCGCTGCTGATAAAT
CCATTCGATGGCTTGGGCAA

Product: integral membrane sensor signal transduction histidine kinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 423; Mature: 423

Protein sequence:

>423_residues
MKDGWGNLAQSWFNAYQRIGQQLDPLPWITWLIACFSVGVGALGLTGIDQTAPKLLIWIDFGLALYLFWLGWVVYRRPNL
SWPRWLIVLSMTSTCLIALSIVELESAAVVLVTVPILLAIITTGRLWPIISYPAFMLIATLVHPAGWSLFNPAVIVFNLL
LFLTMWQLRSSASRATQIQVLAKAQLEQEQQARQFIRFFQHELRGYSSGLEGLVPIFERFLANAPQQNAGISSDEALSAL
ATTTQHLKQLTTQLLILTRDGVLQPQQLQTLNLAELLQQIVNEVRTSHQLDAEHLRLSLCKQQPVLIKGNDLFITLALRT
IIQNSIEANPSSIAGQQISLECCTNNEMAVISISDQGAGYPNELLQRLATNQIPAVLGWSGKLGGNGLGLALIMQVARLH
QGSVRFENQAQGGARTSLALPRI

Sequences:

>Translated_423_residues
MKDGWGNLAQSWFNAYQRIGQQLDPLPWITWLIACFSVGVGALGLTGIDQTAPKLLIWIDFGLALYLFWLGWVVYRRPNL
SWPRWLIVLSMTSTCLIALSIVELESAAVVLVTVPILLAIITTGRLWPIISYPAFMLIATLVHPAGWSLFNPAVIVFNLL
LFLTMWQLRSSASRATQIQVLAKAQLEQEQQARQFIRFFQHELRGYSSGLEGLVPIFERFLANAPQQNAGISSDEALSAL
ATTTQHLKQLTTQLLILTRDGVLQPQQLQTLNLAELLQQIVNEVRTSHQLDAEHLRLSLCKQQPVLIKGNDLFITLALRT
IIQNSIEANPSSIAGQQISLECCTNNEMAVISISDQGAGYPNELLQRLATNQIPAVLGWSGKLGGNGLGLALIMQVARLH
QGSVRFENQAQGGARTSLALPRI
>Mature_423_residues
MKDGWGNLAQSWFNAYQRIGQQLDPLPWITWLIACFSVGVGALGLTGIDQTAPKLLIWIDFGLALYLFWLGWVVYRRPNL
SWPRWLIVLSMTSTCLIALSIVELESAAVVLVTVPILLAIITTGRLWPIISYPAFMLIATLVHPAGWSLFNPAVIVFNLL
LFLTMWQLRSSASRATQIQVLAKAQLEQEQQARQFIRFFQHELRGYSSGLEGLVPIFERFLANAPQQNAGISSDEALSAL
ATTTQHLKQLTTQLLILTRDGVLQPQQLQTLNLAELLQQIVNEVRTSHQLDAEHLRLSLCKQQPVLIKGNDLFITLALRT
IIQNSIEANPSSIAGQQISLECCTNNEMAVISISDQGAGYPNELLQRLATNQIPAVLGWSGKLGGNGLGLALIMQVARLH
QGSVRFENQAQGGARTSLALPRI

Specific function: Probable member of the two-component regulatory system ykoH/ykoG. Potentially phosphorylates ykoG [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 histidine kinase domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR003660
- InterPro:   IPR004358
- InterPro:   IPR003661
- InterPro:   IPR005467
- InterPro:   IPR009082 [H]

Pfam domain/function: PF00672 HAMP; PF02518 HATPase_c; PF00512 HisKA [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 46772; Mature: 46772

Theoretical pI: Translated: 8.22; Mature: 8.22

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50109 HIS_KIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKDGWGNLAQSWFNAYQRIGQQLDPLPWITWLIACFSVGVGALGLTGIDQTAPKLLIWID
CCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHCCCCCCCCCCCEEEEEH
FGLALYLFWLGWVVYRRPNLSWPRWLIVLSMTSTCLIALSIVELESAAVVLVTVPILLAI
HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
ITTGRLWPIISYPAFMLIATLVHPAGWSLFNPAVIVFNLLLFLTMWQLRSSASRATQIQV
HHCCCCHHHHHHHHHHHHHHHHCCCCCCHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LAKAQLEQEQQARQFIRFFQHELRGYSSGLEGLVPIFERFLANAPQQNAGISSDEALSAL
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHH
ATTTQHLKQLTTQLLILTRDGVLQPQQLQTLNLAELLQQIVNEVRTSHQLDAEHLRLSLC
HHHHHHHHHHHHHHHHEECCCCCCHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHH
KQQPVLIKGNDLFITLALRTIIQNSIEANPSSIAGQQISLECCTNNEMAVISISDQGAGY
CCCCEEEECCCEEEHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCEEEEEECCCCCCC
PNELLQRLATNQIPAVLGWSGKLGGNGLGLALIMQVARLHQGSVRFENQAQGGARTSLAL
HHHHHHHHHHCCCCEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
PRI
CCC
>Mature Secondary Structure
MKDGWGNLAQSWFNAYQRIGQQLDPLPWITWLIACFSVGVGALGLTGIDQTAPKLLIWID
CCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHCCCCCCCCCCCEEEEEH
FGLALYLFWLGWVVYRRPNLSWPRWLIVLSMTSTCLIALSIVELESAAVVLVTVPILLAI
HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
ITTGRLWPIISYPAFMLIATLVHPAGWSLFNPAVIVFNLLLFLTMWQLRSSASRATQIQV
HHCCCCHHHHHHHHHHHHHHHHCCCCCCHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LAKAQLEQEQQARQFIRFFQHELRGYSSGLEGLVPIFERFLANAPQQNAGISSDEALSAL
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHH
ATTTQHLKQLTTQLLILTRDGVLQPQQLQTLNLAELLQQIVNEVRTSHQLDAEHLRLSLC
HHHHHHHHHHHHHHHHEECCCCCCHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHH
KQQPVLIKGNDLFITLALRTIIQNSIEANPSSIAGQQISLECCTNNEMAVISISDQGAGY
CCCCEEEECCCEEEHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCEEEEEECCCCCCC
PNELLQRLATNQIPAVLGWSGKLGGNGLGLALIMQVARLHQGSVRFENQAQGGARTSLAL
HHHHHHHHHHCCCCEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
PRI
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]