Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
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Accession | NC_009972 |
Length | 6,346,587 |
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The map label for this gene is 159899458
Identifier: 159899458
GI number: 159899458
Start: 3714404
End: 3715426
Strand: Direct
Name: 159899458
Synonym: Haur_2939
Alternate gene names: NA
Gene position: 3714404-3715426 (Clockwise)
Preceding gene: 159899457
Following gene: 159899459
Centisome position: 58.53
GC content: 51.12
Gene sequence:
>1023_bases ATGTCAGGTAGCACAATTCAGTTTCCACAAAAATTTCAAGGTATTTTCAAGCGTTCTCAAGCCAGCTTCGCCCCCCATCT CCAAGTCGCCCGCCAGTTACTCAATAGTCTCAATATTCCAGCGCCATTGCAACATGTCTGGGATTATGTAGTCGTGGACA ATCCACAGCCATCGTTCATTCTACTGCCCTTGCTTTTTTTAAGTTTGGCTGAGCAATTGGGCGGCATTACACCAGCCCAT CAACGGGCGTTGCCAGTAATTATGTTAACCATGGAAGCGGTTGCAGTGATGGACGATACGGTCGATATTTCCAGCCGACG TTCGGAGCGAGCAACCGTGCCTGCCCGCTTCGGCGTAACCCAAGCCACGCCGATTGCCACCAGCCTCACCGCAACCATCG CCGAATTGGCGGTCGAAATTGACCCACGTTTGGTTCAGCCAACCATGAATTTTTTGCGCGAATTAGGCGCTTTGCAAATT TGGGAAGTCGAACATAGCTACCCTGAGCAGGCTGAATGGGACGAATGGATGCAGCAACGCTATCGCCAAGGCCAAATTGC CACCGAATTTGCCCTCAATTTAGCCCTGATGTACCACCGCCAAGCGCCATTTCCGGCCACGCCTGCCTATTTCTTTGCCC AAATAATGCAAGATGTTGATGATGTCGTGGGCCTTTTAGAGCAACGAGTGCAATTCGGCGAGGGCTGTGATCTTCAGCGC GGTCGGGTTATTGCCCCACTGGCTGATGCGTGTGATAATAATATTCAGCTAGCTAGCTTAATCAGCCAGCTTTGGCGTAA AAAACAAGCCTTGTTGGCCGAATCCAATCAAACAACCTTCCAACAACTCAACCAACATGTGCTGGAAGCCGGATTAGCCA CAACCCTTGATCGCTTGACCCAGATTGCCATAGCCTGCGAAGAACAAACACCGCCAGCGCTCCAAGCCTGGATGTATGAT GTGATTTGCACTTTTATGGCTCGCCTCAGCGGCGTTGGCCTAGCGCAAACCCAAACAGCCTAG
Upstream 100 bases:
>100_bases ATAAAAAATAAAGATATAAATTATTGATTTGGTTCAGTGAGCATCAGCATTACAATCAAGCACCACACTCGCGAGCCTTC AGCCATTGCGAGAGGTTTGT
Downstream 100 bases:
>100_bases TGCTATGGCACGCCCACTGATGGCTTACAATCATGATAGTCGCGGCTATCAGTGGAGCAATCATGAAGGATGGATGGGGC AATTTAGCGCAATCATGGTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 340; Mature: 339
Protein sequence:
>340_residues MSGSTIQFPQKFQGIFKRSQASFAPHLQVARQLLNSLNIPAPLQHVWDYVVVDNPQPSFILLPLLFLSLAEQLGGITPAH QRALPVIMLTMEAVAVMDDTVDISSRRSERATVPARFGVTQATPIATSLTATIAELAVEIDPRLVQPTMNFLRELGALQI WEVEHSYPEQAEWDEWMQQRYRQGQIATEFALNLALMYHRQAPFPATPAYFFAQIMQDVDDVVGLLEQRVQFGEGCDLQR GRVIAPLADACDNNIQLASLISQLWRKKQALLAESNQTTFQQLNQHVLEAGLATTLDRLTQIAIACEEQTPPALQAWMYD VICTFMARLSGVGLAQTQTA
Sequences:
>Translated_340_residues MSGSTIQFPQKFQGIFKRSQASFAPHLQVARQLLNSLNIPAPLQHVWDYVVVDNPQPSFILLPLLFLSLAEQLGGITPAH QRALPVIMLTMEAVAVMDDTVDISSRRSERATVPARFGVTQATPIATSLTATIAELAVEIDPRLVQPTMNFLRELGALQI WEVEHSYPEQAEWDEWMQQRYRQGQIATEFALNLALMYHRQAPFPATPAYFFAQIMQDVDDVVGLLEQRVQFGEGCDLQR GRVIAPLADACDNNIQLASLISQLWRKKQALLAESNQTTFQQLNQHVLEAGLATTLDRLTQIAIACEEQTPPALQAWMYD VICTFMARLSGVGLAQTQTA >Mature_339_residues SGSTIQFPQKFQGIFKRSQASFAPHLQVARQLLNSLNIPAPLQHVWDYVVVDNPQPSFILLPLLFLSLAEQLGGITPAHQ RALPVIMLTMEAVAVMDDTVDISSRRSERATVPARFGVTQATPIATSLTATIAELAVEIDPRLVQPTMNFLRELGALQIW EVEHSYPEQAEWDEWMQQRYRQGQIATEFALNLALMYHRQAPFPATPAYFFAQIMQDVDDVVGLLEQRVQFGEGCDLQRG RVIAPLADACDNNIQLASLISQLWRKKQALLAESNQTTFQQLNQHVLEAGLATTLDRLTQIAIACEEQTPPALQAWMYDV ICTFMARLSGVGLAQTQTA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37943; Mature: 37812
Theoretical pI: Translated: 4.76; Mature: 4.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGSTIQFPQKFQGIFKRSQASFAPHLQVARQLLNSLNIPAPLQHVWDYVVVDNPQPSFI CCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHCCEEEECCCCCCHH LLPLLFLSLAEQLGGITPAHQRALPVIMLTMEAVAVMDDTVDISSRRSERATVPARFGVT HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCHHCCCC QATPIATSLTATIAELAVEIDPRLVQPTMNFLRELGALQIWEVEHSYPEQAEWDEWMQQR CCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCEEEEECCCCCCCCCCHHHHHHHH YRQGQIATEFALNLALMYHRQAPFPATPAYFFAQIMQDVDDVVGLLEQRVQFGEGCDLQR HHCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC GRVIAPLADACDNNIQLASLISQLWRKKQALLAESNQTTFQQLNQHVLEAGLATTLDRLT CEEECCHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH QIAIACEEQTPPALQAWMYDVICTFMARLSGVGLAQTQTA HHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure SGSTIQFPQKFQGIFKRSQASFAPHLQVARQLLNSLNIPAPLQHVWDYVVVDNPQPSFI CCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHCCEEEECCCCCCHH LLPLLFLSLAEQLGGITPAHQRALPVIMLTMEAVAVMDDTVDISSRRSERATVPARFGVT HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCHHCCCC QATPIATSLTATIAELAVEIDPRLVQPTMNFLRELGALQIWEVEHSYPEQAEWDEWMQQR CCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCEEEEECCCCCCCCCCHHHHHHHH YRQGQIATEFALNLALMYHRQAPFPATPAYFFAQIMQDVDDVVGLLEQRVQFGEGCDLQR HHCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC GRVIAPLADACDNNIQLASLISQLWRKKQALLAESNQTTFQQLNQHVLEAGLATTLDRLT CEEECCHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH QIAIACEEQTPPALQAWMYDVICTFMARLSGVGLAQTQTA HHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA