The gene/protein map for NC_009972 is currently unavailable.
Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

Click here to switch to the map view.

The map label for this gene is 159899427

Identifier: 159899427

GI number: 159899427

Start: 3678972

End: 3679763

Strand: Direct

Name: 159899427

Synonym: Haur_2908

Alternate gene names: NA

Gene position: 3678972-3679763 (Clockwise)

Preceding gene: 159899426

Following gene: 159899431

Centisome position: 57.97

GC content: 49.75

Gene sequence:

>792_bases
ATGGTGTTCTTTGGGATCGTCTTGCTGATCGCGGCTGTTATCTGCTTCTTTTTCGCTCGCAGTCAATCCAATAAATTGGC
CGATCTGAATGCTACCGACACCTATACAACCCAAATGTTGCATGATTTGCACAAAAAAGTTGTGGAAACGCTCGGGGCCG
AGGCGCTGGCCGAACCCTGCGAAATTGAAGGCCAAGTTAGCTGCGATAATCCATTGGTCGCCCCGATTTCTGGTCAAACC
TGTATTGCCTACCGTTTTTCGTTAACTCGCGAATATAGCGAAGTTGTGCATGACACCGATAGCGAAGGTCGCAAACGTAC
CCGTACCCAAACTGGCAGTGAAACGATTAAATCTGAGGAAGAGTGCGCCTATTTCTGGATCAACGATAATTTTGGTAAGG
TCTGGGTTGACCCAACTGATGCCGAGATTGAGTATGAGGCGGGCCAAAATATTCTGCTGCCTTCGCCAGATAAGGCTTCA
ATTTTGCATTTTGGCGATTTTGAATTTGCCGCCCCAGCCTCAAACAAGGGTGCTCGCCGCACCACTGGCTATCGGGCGCA
AGAAGAGCTTTTTACCGACGATGGGCGAGCCTACATTCTTGGTTGTGTGACTGATGACGAGGGTGAGCCAACCATCGCCT
ACCATGAAAAGAAGCTTGATCGCATGCTGGTTAGCCGCAAAACTGAACGCGAATTGGCTAACAGCGCGGCTGGTTGGTCA
CGCAATCTCTATTATGGCGCTGCTGGCTCAGCCGTAGCTGGTATCATCTTCACGATTTGGGGTTTGTTGTAA

Upstream 100 bases:

>100_bases
AGCCATCGCCACAAAAGTGCTAGCAGAGTGTCATTGCCAAGCGTGCTGATGACCTTTATACTCAGTTTATCCCCGTCTAG
CCTTTGGGAGGATCGCTGAT

Downstream 100 bases:

>100_bases
TAACCCTATTTTAAGCTTCCATACACCCGTAAAATCGGATCGATTGCGCTGAGGTGGCTCAAAGCCCAAGCCAAACTGGC
AGCCTGAACTGCCTCAGCCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 263; Mature: 263

Protein sequence:

>263_residues
MVFFGIVLLIAAVICFFFARSQSNKLADLNATDTYTTQMLHDLHKKVVETLGAEALAEPCEIEGQVSCDNPLVAPISGQT
CIAYRFSLTREYSEVVHDTDSEGRKRTRTQTGSETIKSEEECAYFWINDNFGKVWVDPTDAEIEYEAGQNILLPSPDKAS
ILHFGDFEFAAPASNKGARRTTGYRAQEELFTDDGRAYILGCVTDDEGEPTIAYHEKKLDRMLVSRKTERELANSAAGWS
RNLYYGAAGSAVAGIIFTIWGLL

Sequences:

>Translated_263_residues
MVFFGIVLLIAAVICFFFARSQSNKLADLNATDTYTTQMLHDLHKKVVETLGAEALAEPCEIEGQVSCDNPLVAPISGQT
CIAYRFSLTREYSEVVHDTDSEGRKRTRTQTGSETIKSEEECAYFWINDNFGKVWVDPTDAEIEYEAGQNILLPSPDKAS
ILHFGDFEFAAPASNKGARRTTGYRAQEELFTDDGRAYILGCVTDDEGEPTIAYHEKKLDRMLVSRKTERELANSAAGWS
RNLYYGAAGSAVAGIIFTIWGLL
>Mature_263_residues
MVFFGIVLLIAAVICFFFARSQSNKLADLNATDTYTTQMLHDLHKKVVETLGAEALAEPCEIEGQVSCDNPLVAPISGQT
CIAYRFSLTREYSEVVHDTDSEGRKRTRTQTGSETIKSEEECAYFWINDNFGKVWVDPTDAEIEYEAGQNILLPSPDKAS
ILHFGDFEFAAPASNKGARRTTGYRAQEELFTDDGRAYILGCVTDDEGEPTIAYHEKKLDRMLVSRKTERELANSAAGWS
RNLYYGAAGSAVAGIIFTIWGLL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29179; Mature: 29179

Theoretical pI: Translated: 4.55; Mature: 4.55

Prosite motif: PS00070 ALDEHYDE_DEHYDR_CYS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVFFGIVLLIAAVICFFFARSQSNKLADLNATDTYTTQMLHDLHKKVVETLGAEALAEPC
CHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHCHHHHCCCC
EIEGQVSCDNPLVAPISGQTCIAYRFSLTREYSEVVHDTDSEGRKRTRTQTGSETIKSEE
CCCCEEECCCCEEECCCCCEEEEEEHHHHHHHHHHHCCCCCCHHHHHHCCCCHHHHCCCC
ECAYFWINDNFGKVWVDPTDAEIEYEAGQNILLPSPDKASILHFGDFEFAAPASNKGARR
CEEEEEEECCCCEEEECCCCCEEEECCCCEEECCCCCCCCEEEECCCCEECCCCCCCCCC
TTGYRAQEELFTDDGRAYILGCVTDDEGEPTIAYHEKKLDRMLVSRKTERELANSAAGWS
CCCCCHHHHHHCCCCCEEEEEEEECCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCCC
RNLYYGAAGSAVAGIIFTIWGLL
CCEEECCCHHHHHHHHHHHHHCC
>Mature Secondary Structure
MVFFGIVLLIAAVICFFFARSQSNKLADLNATDTYTTQMLHDLHKKVVETLGAEALAEPC
CHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHCHHHHCCCC
EIEGQVSCDNPLVAPISGQTCIAYRFSLTREYSEVVHDTDSEGRKRTRTQTGSETIKSEE
CCCCEEECCCCEEECCCCCEEEEEEHHHHHHHHHHHCCCCCCHHHHHHCCCCHHHHCCCC
ECAYFWINDNFGKVWVDPTDAEIEYEAGQNILLPSPDKASILHFGDFEFAAPASNKGARR
CEEEEEEECCCCEEEECCCCCEEEECCCCEEECCCCCCCCEEEECCCCEECCCCCCCCCC
TTGYRAQEELFTDDGRAYILGCVTDDEGEPTIAYHEKKLDRMLVSRKTERELANSAAGWS
CCCCCHHHHHHCCCCCEEEEEEEECCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCCC
RNLYYGAAGSAVAGIIFTIWGLL
CCEEECCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA