Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
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Accession | NC_009972 |
Length | 6,346,587 |
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The map label for this gene is 159899426
Identifier: 159899426
GI number: 159899426
Start: 3677708
End: 3678835
Strand: Direct
Name: 159899426
Synonym: Haur_2907
Alternate gene names: NA
Gene position: 3677708-3678835 (Clockwise)
Preceding gene: 159899418
Following gene: 159899427
Centisome position: 57.95
GC content: 52.39
Gene sequence:
>1128_bases GTGAAACGGACACTGCGCTCGGTGTTGTTTGGGGTTATCGGGGTCGCGGTGTTGCTGGGGTTTGCTCAATCGGCACAGGC CGAAGGCAAGCCAACATTGTATCTACCAACGCCACCAGGCCAAACGTGGGAAGTAATTCAAGGCTATAACTGCGGGACAC ACGACGGTTGGGGCCGACTCTCGTTCGATTTGGTCAATACCGAAGGGCCAACGACTGGTGCACCAATCTATGCCGCAGCC GATGGTACAATCTTTTTCTGGACAGGTCGCTCTGGTTCGCTGATTCTCTCTCACGGTGATGGCTACTACACGATGTATTC ACACTTATCATCGTGGATCGAAGCTCCGGTTGGCACTTCGATCAAACGTGGTCAATATATCGGCAACGCAGGCGCGACTA ATCCCACACCCACAGTTCCCCACTTACACTTTACCTTTTTCCGTGGCGATGGCCCATATGCCTACAATCGCCAACCAGTG GCTTTAGCCTTCGCTGAAGGCCACGATTTTCCGGATACTGGCAAATGTAATCAATATGCTGGCACGCAATTAGTTGCGAA TGGCGAAGCTGATAACATTGCTCCAACCCTCGAATGGGCTGGCCCAGCCGAACGCACCTGGGTCAACAGTGGGCGGCTCG ATTGGCAATTAGCCGATAATCAAAGCATCCTTGGCTTTAGCCAAAATTGGGATGCCCCCGCTGCCACTGAAAAACCGCAA TTTGCCGCCAACACAGGCTACCTTGAGTTGATCGCAGGTCAACACACCGCCTATGTGACGGTGTGGGATGCCGCTAGCAA TCAAGCAAGCTTCCAACGGGAAATCTGGTTTGATCCAACTGCGCCCAGTTTGCCAACCACGACCGTGACCGAAAGCCTCA AACTCAACGGCAGCCAAGCCAGTTTGGTGCTCAATTGGCAAGCGGCCAGCGATGCCGATTCGGGAATCAAAGGCTATCAA GTCTATTTTGGCACTGATCCGTTGGGCACAAGCGAATGGTTTGTGGCGGAGCAACAAGTTGATGTTGGCTTACGCGAACC AGGCTTCTACTACTTCCGTATTCGCAGCGAAGATAATGCCCATAATTTCAGCGAATGGACAACCCTGCAAACGGTGCAAA TTAATTAA
Upstream 100 bases:
>100_bases AGCCTTGGTATCCTCCCCCGCCGATACACCATGCATTGTGTATTGCATCCTAGTTTCGATGGTGGCTCCATGTTGAGCCT GGTTTTCTGGAGGTTCCATG
Downstream 100 bases:
>100_bases GTCAAGCGATTAATTTTCTGTATTGAATACCATATCAGCCATCGCCACAAAAGTGCTAGCAGAGTGTCATTGCCAAGCGT GCTGATGACCTTTATACTCA
Product: peptidase M23B
Products: NA
Alternate protein names: Peptidase M
Number of amino acids: Translated: 375; Mature: 375
Protein sequence:
>375_residues MKRTLRSVLFGVIGVAVLLGFAQSAQAEGKPTLYLPTPPGQTWEVIQGYNCGTHDGWGRLSFDLVNTEGPTTGAPIYAAA DGTIFFWTGRSGSLILSHGDGYYTMYSHLSSWIEAPVGTSIKRGQYIGNAGATNPTPTVPHLHFTFFRGDGPYAYNRQPV ALAFAEGHDFPDTGKCNQYAGTQLVANGEADNIAPTLEWAGPAERTWVNSGRLDWQLADNQSILGFSQNWDAPAATEKPQ FAANTGYLELIAGQHTAYVTVWDAASNQASFQREIWFDPTAPSLPTTTVTESLKLNGSQASLVLNWQAASDADSGIKGYQ VYFGTDPLGTSEWFVAEQQVDVGLREPGFYYFRIRSEDNAHNFSEWTTLQTVQIN
Sequences:
>Translated_375_residues MKRTLRSVLFGVIGVAVLLGFAQSAQAEGKPTLYLPTPPGQTWEVIQGYNCGTHDGWGRLSFDLVNTEGPTTGAPIYAAA DGTIFFWTGRSGSLILSHGDGYYTMYSHLSSWIEAPVGTSIKRGQYIGNAGATNPTPTVPHLHFTFFRGDGPYAYNRQPV ALAFAEGHDFPDTGKCNQYAGTQLVANGEADNIAPTLEWAGPAERTWVNSGRLDWQLADNQSILGFSQNWDAPAATEKPQ FAANTGYLELIAGQHTAYVTVWDAASNQASFQREIWFDPTAPSLPTTTVTESLKLNGSQASLVLNWQAASDADSGIKGYQ VYFGTDPLGTSEWFVAEQQVDVGLREPGFYYFRIRSEDNAHNFSEWTTLQTVQIN >Mature_375_residues MKRTLRSVLFGVIGVAVLLGFAQSAQAEGKPTLYLPTPPGQTWEVIQGYNCGTHDGWGRLSFDLVNTEGPTTGAPIYAAA DGTIFFWTGRSGSLILSHGDGYYTMYSHLSSWIEAPVGTSIKRGQYIGNAGATNPTPTVPHLHFTFFRGDGPYAYNRQPV ALAFAEGHDFPDTGKCNQYAGTQLVANGEADNIAPTLEWAGPAERTWVNSGRLDWQLADNQSILGFSQNWDAPAATEKPQ FAANTGYLELIAGQHTAYVTVWDAASNQASFQREIWFDPTAPSLPTTTVTESLKLNGSQASLVLNWQAASDADSGIKGYQ VYFGTDPLGTSEWFVAEQQVDVGLREPGFYYFRIRSEDNAHNFSEWTTLQTVQIN
Specific function: Unknown
COG id: COG0739
COG function: function code M; Membrane proteins related to metalloendopeptidases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40931; Mature: 40931
Theoretical pI: Translated: 4.61; Mature: 4.61
Prosite motif: PS50853 FN3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRTLRSVLFGVIGVAVLLGFAQSAQAEGKPTLYLPTPPGQTWEVIQGYNCGTHDGWGRL CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCEEECCCCCCCCCCCEE SFDLVNTEGPTTGAPIYAAADGTIFFWTGRSGSLILSHGDGYYTMYSHLSSWIEAPVGTS EEEEEECCCCCCCCCEEEECCCEEEEEECCCCCEEEECCCCEEHHHHHHHHHHCCCCCCC IKRGQYIGNAGATNPTPTVPHLHFTFFRGDGPYAYNRQPVALAFAEGHDFPDTGKCNQYA CCCCEEECCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCEEEEEECCCCCCCCCCCCCCC GTQLVANGEADNIAPTLEWAGPAERTWVNSGRLDWQLADNQSILGFSQNWDAPAATEKPQ CCEEEECCCCCCCCCEEECCCCCCCEEECCCEEEEEECCCCEEEEECCCCCCCCCCCCCC FAANTGYLELIAGQHTAYVTVWDAASNQASFQREIWFDPTAPSLPTTTVTESLKLNGSQA EECCCCEEEEEECCCEEEEEEEECCCCCCCCEEEEEECCCCCCCCCCEEEHEEEECCCCE SLVLNWQAASDADSGIKGYQVYFGTDPLGTSEWFVAEQQVDVGLREPGFYYFRIRSEDNA EEEEEEECCCCCCCCCCEEEEEECCCCCCCCCEEEEEHHCCCCCCCCCEEEEEEECCCCC HNFSEWTTLQTVQIN CCCCCCEEEEEEEEC >Mature Secondary Structure MKRTLRSVLFGVIGVAVLLGFAQSAQAEGKPTLYLPTPPGQTWEVIQGYNCGTHDGWGRL CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCEEECCCCCCCCCCCEE SFDLVNTEGPTTGAPIYAAADGTIFFWTGRSGSLILSHGDGYYTMYSHLSSWIEAPVGTS EEEEEECCCCCCCCCEEEECCCEEEEEECCCCCEEEECCCCEEHHHHHHHHHHCCCCCCC IKRGQYIGNAGATNPTPTVPHLHFTFFRGDGPYAYNRQPVALAFAEGHDFPDTGKCNQYA CCCCEEECCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCEEEEEECCCCCCCCCCCCCCC GTQLVANGEADNIAPTLEWAGPAERTWVNSGRLDWQLADNQSILGFSQNWDAPAATEKPQ CCEEEECCCCCCCCCEEECCCCCCCEEECCCEEEEEECCCCEEEEECCCCCCCCCCCCCC FAANTGYLELIAGQHTAYVTVWDAASNQASFQREIWFDPTAPSLPTTTVTESLKLNGSQA EECCCCEEEEEECCCEEEEEEEECCCCCCCCEEEEEECCCCCCCCCCEEEHEEEECCCCE SLVLNWQAASDADSGIKGYQVYFGTDPLGTSEWFVAEQQVDVGLREPGFYYFRIRSEDNA EEEEEEECCCCCCCCCCEEEEEECCCCCCCCCEEEEEHHCCCCCCCCCEEEEEEECCCCC HNFSEWTTLQTVQIN CCCCCCEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA