Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
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Accession | NC_009972 |
Length | 6,346,587 |
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The map label for this gene is 159899380
Identifier: 159899380
GI number: 159899380
Start: 3631873
End: 3632715
Strand: Direct
Name: 159899380
Synonym: Haur_2861
Alternate gene names: NA
Gene position: 3631873-3632715 (Clockwise)
Preceding gene: 159899379
Following gene: 159899381
Centisome position: 57.23
GC content: 49.82
Gene sequence:
>843_bases ATGGATACACAAACCCAACCATTTTGGCAACGCTTCGGCATCCATACGCTTAGTCTTGGCTTGGGTGGGGCTATTGCTAG CCTTGTATCGTTGTTGCTAGGAAACATCATTTTTGGCCGTTCAAGTCGGGTATTAACTGGTGGTATGCCCGTATTTTTGG TCATAATGATGGTCATTGTAGGTTGTGTATCCTACTTTATCATCAAACGTTGGTTTCGTGGTTGTTCTAGCTTTTTGGTG ATTGGCGGCTGGTTTCTTGCCCACTTCGTTGTGAATGTGATTGCTGTCGTCTTCTTTGATTCAGATATGTCGATTGTTTC CTACGTAATCACTTGGCTGATTATGGGAGCACTTGGCGCACTGATGTTCAGCAATTCCACCTTTGCTCGGAGCATTGGGA TGGTTGGGGCAGGCACCGCAATCGGCGCAGGAGTGTATGCGGCTTCACGCAACAACGAGGTGCTCAAGGCCTCAGGGTAC GGGCGGATTCCGCCATCGACCGTGATTTTGCTAACCCAGCATGTTCGCTTTGCCAACGATGCGGTCAATCAACTACCAGC TAATGCCCCTGCTAATATCCGTAAGATCGCAGTCAATGTTGTGCTCGAACACGTGATTCGCGATTGGTGGTCGAACGGCA ATAACGAAGGCCTGACTCCCGCCGATGTCAACGATTTGGGCGCGTTTGTCCAACTGGCTTGGTTTGCGGCGCGTGGTCAA AGTCACTTGTTGCAAGCTGAAGCCGTGTTTCGGGCAAGCTTGATCGCATTAATGGACGATTGGTTTAATTCGTGGAATGC CGAAGGAGTTGAAGGCGCACCACGCTGGCAATCCAAATCATGA
Upstream 100 bases:
>100_bases CGTGAAGAAATTAAACGTGGCAATGTGGCCGCAGCGATTCAATTAGCAGCAGTGACAATTGCCTTAGCCGCAATTGTTAT CATGGCAGTGGCAACCTAAC
Downstream 100 bases:
>100_bases GCAATTTCATCCAATCGCCAATCTATCCCGCTGCTGGGCGACACCTACTTGCAAATTTAGGTGGCTGCTCAGCAGCAATC CTCAATGATCGCGATTTGCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 280; Mature: 280
Protein sequence:
>280_residues MDTQTQPFWQRFGIHTLSLGLGGAIASLVSLLLGNIIFGRSSRVLTGGMPVFLVIMMVIVGCVSYFIIKRWFRGCSSFLV IGGWFLAHFVVNVIAVVFFDSDMSIVSYVITWLIMGALGALMFSNSTFARSIGMVGAGTAIGAGVYAASRNNEVLKASGY GRIPPSTVILLTQHVRFANDAVNQLPANAPANIRKIAVNVVLEHVIRDWWSNGNNEGLTPADVNDLGAFVQLAWFAARGQ SHLLQAEAVFRASLIALMDDWFNSWNAEGVEGAPRWQSKS
Sequences:
>Translated_280_residues MDTQTQPFWQRFGIHTLSLGLGGAIASLVSLLLGNIIFGRSSRVLTGGMPVFLVIMMVIVGCVSYFIIKRWFRGCSSFLV IGGWFLAHFVVNVIAVVFFDSDMSIVSYVITWLIMGALGALMFSNSTFARSIGMVGAGTAIGAGVYAASRNNEVLKASGY GRIPPSTVILLTQHVRFANDAVNQLPANAPANIRKIAVNVVLEHVIRDWWSNGNNEGLTPADVNDLGAFVQLAWFAARGQ SHLLQAEAVFRASLIALMDDWFNSWNAEGVEGAPRWQSKS >Mature_280_residues MDTQTQPFWQRFGIHTLSLGLGGAIASLVSLLLGNIIFGRSSRVLTGGMPVFLVIMMVIVGCVSYFIIKRWFRGCSSFLV IGGWFLAHFVVNVIAVVFFDSDMSIVSYVITWLIMGALGALMFSNSTFARSIGMVGAGTAIGAGVYAASRNNEVLKASGY GRIPPSTVILLTQHVRFANDAVNQLPANAPANIRKIAVNVVLEHVIRDWWSNGNNEGLTPADVNDLGAFVQLAWFAARGQ SHLLQAEAVFRASLIALMDDWFNSWNAEGVEGAPRWQSKS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30401; Mature: 30401
Theoretical pI: Translated: 9.20; Mature: 9.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDTQTQPFWQRFGIHTLSLGLGGAIASLVSLLLGNIIFGRSSRVLTGGMPVFLVIMMVIV CCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCHHHHHHHHHHH GCVSYFIIKRWFRGCSSFLVIGGWFLAHFVVNVIAVVFFDSDMSIVSYVITWLIMGALGA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH LMFSNSTFARSIGMVGAGTAIGAGVYAASRNNEVLKASGYGRIPPSTVILLTQHVRFAND HHHCCCHHHHHHCCCCCCHHHHHHHHEECCCCCEEEECCCCCCCCHHHHHHHHHHHHHHH AVNQLPANAPANIRKIAVNVVLEHVIRDWWSNGNNEGLTPADVNDLGAFVQLAWFAARGQ HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCH SHLLQAEAVFRASLIALMDDWFNSWNAEGVEGAPRWQSKS HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC >Mature Secondary Structure MDTQTQPFWQRFGIHTLSLGLGGAIASLVSLLLGNIIFGRSSRVLTGGMPVFLVIMMVIV CCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCHHHHHHHHHHH GCVSYFIIKRWFRGCSSFLVIGGWFLAHFVVNVIAVVFFDSDMSIVSYVITWLIMGALGA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH LMFSNSTFARSIGMVGAGTAIGAGVYAASRNNEVLKASGYGRIPPSTVILLTQHVRFAND HHHCCCHHHHHHCCCCCCHHHHHHHHEECCCCCEEEECCCCCCCCHHHHHHHHHHHHHHH AVNQLPANAPANIRKIAVNVVLEHVIRDWWSNGNNEGLTPADVNDLGAFVQLAWFAARGQ HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCH SHLLQAEAVFRASLIALMDDWFNSWNAEGVEGAPRWQSKS HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA