Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
---|---|
Accession | NC_009972 |
Length | 6,346,587 |
Click here to switch to the map view.
The map label for this gene is 159899360
Identifier: 159899360
GI number: 159899360
Start: 3606934
End: 3607257
Strand: Direct
Name: 159899360
Synonym: Haur_2841
Alternate gene names: NA
Gene position: 3606934-3607257 (Clockwise)
Preceding gene: 159899359
Following gene: 159899361
Centisome position: 56.83
GC content: 49.38
Gene sequence:
>324_bases ATGGATGGAATGAGCGCTTTGGTGGTGATTATCGGGGCAGTTGGCTTAATTACCCTCTTGATTATGCGCACCAAAACCTA TCGCGAACGCTTACGCTTTCAGGCGAGGGCGATGGATCGCCATATGCGAACCACCAATATTCGCGATGACGTGCGCCAAG ACATTTTGGATCTGTTGATTCGTGGCGATCGTTTGGCAGCCATCCAATATGCCCACGAACAAACCCACCTCGATTTGTTA GAAGCGCGAACTTTGGTTGATGATATTGAAAAAGCGCTGAAAAAACACGACCAAACCCAAGGAGCCAGCAGCGATGGCCA TTGA
Upstream 100 bases:
>100_bases GATACGCTCAAAATGGTCGGGGTTTGGGTTTCCGAAGGCCCAGGCCAGCAAGCCTTCGCCAGCCGCGAATGGGTACAAAG CTAATGCTGAGGGATACGTT
Downstream 100 bases:
>100_bases CCTTGCCCCACACAACCCCTATGGTTTAACCGTGCGCAGCGCCGTGCTTGGGCGCTGTGGCGGTTTCGGGGCGGGCACCG ATCGCTTGGCGAATCTCAGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 107; Mature: 107
Protein sequence:
>107_residues MDGMSALVVIIGAVGLITLLIMRTKTYRERLRFQARAMDRHMRTTNIRDDVRQDILDLLIRGDRLAAIQYAHEQTHLDLL EARTLVDDIEKALKKHDQTQGASSDGH
Sequences:
>Translated_107_residues MDGMSALVVIIGAVGLITLLIMRTKTYRERLRFQARAMDRHMRTTNIRDDVRQDILDLLIRGDRLAAIQYAHEQTHLDLL EARTLVDDIEKALKKHDQTQGASSDGH >Mature_107_residues MDGMSALVVIIGAVGLITLLIMRTKTYRERLRFQARAMDRHMRTTNIRDDVRQDILDLLIRGDRLAAIQYAHEQTHLDLL EARTLVDDIEKALKKHDQTQGASSDGH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12222; Mature: 12222
Theoretical pI: Translated: 7.91; Mature: 7.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.7 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDGMSALVVIIGAVGLITLLIMRTKTYRERLRFQARAMDRHMRTTNIRDDVRQDILDLLI CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH RGDRLAAIQYAHEQTHLDLLEARTLVDDIEKALKKHDQTQGASSDGH CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MDGMSALVVIIGAVGLITLLIMRTKTYRERLRFQARAMDRHMRTTNIRDDVRQDILDLLI CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH RGDRLAAIQYAHEQTHLDLLEARTLVDDIEKALKKHDQTQGASSDGH CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA