Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
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Accession | NC_009972 |
Length | 6,346,587 |
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The map label for this gene is 159899357
Identifier: 159899357
GI number: 159899357
Start: 3605533
End: 3606048
Strand: Direct
Name: 159899357
Synonym: Haur_2838
Alternate gene names: NA
Gene position: 3605533-3606048 (Clockwise)
Preceding gene: 159899356
Following gene: 159899358
Centisome position: 56.81
GC content: 54.65
Gene sequence:
>516_bases ATGATTTGGCTGGCACTTGGTTTGGGCTTGCTGGCGCTCTGGCTCTGGCGACGCAGCAACCAACTGCGAGCTAGCACGGG CCTGCCTTGGCGCACAGTGGTTTATCACGATACCGCCCGCCGTGAATTAACCAAAGCCTTATTTTCAGCCCGTTATCAAT TAACCGGCAAGCCCGATTATGTCTTGGCCGATGGCAAGGCTTTGATTCCGGTTGAGGTCAAGCCGCAGCGCCAAGCAACT AGCCCACGCCAAGGCGATATTTTGCAATTGGCCGCCTATTGTTTGTTGCTGGAAGAAGCGACTGGCGTGGCTCCGCGTTA TGGTTTGTTGCGCTACGCTCAGCATACCTTCCAAGTCGATTGGACCGATCAACTGTATCAGGCCTTGCTGGAAGCGCTCG ACGCGATGCGCGATGACCTTGAGCTAAATGATGTTGAACGTTCGCATGAACAACCATGGCGTTGTCGCGCCTGTGGATTT GGCGACCGCTGCACAGATGCGCTAGAATATGACTAG
Upstream 100 bases:
>100_bases CGGCCCATCAACGCTATGGTCAAGATTTGCAGCAAAGCCAGTGGTTACGCACCGTAGCCATTGGCTTGTTGGTGCTAGCC GCCTTGGCCTTGGTGTTGGC
Downstream 100 bases:
>100_bases CACATCCCAAGCTTTTGATAATGACGTTGCTAGCAAGCGTTGTGACAAACTATGAAATTTAAAATTCGCCAACATCCACG CATGAAAGATATTTGTGTCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 171; Mature: 171
Protein sequence:
>171_residues MIWLALGLGLLALWLWRRSNQLRASTGLPWRTVVYHDTARRELTKALFSARYQLTGKPDYVLADGKALIPVEVKPQRQAT SPRQGDILQLAAYCLLLEEATGVAPRYGLLRYAQHTFQVDWTDQLYQALLEALDAMRDDLELNDVERSHEQPWRCRACGF GDRCTDALEYD
Sequences:
>Translated_171_residues MIWLALGLGLLALWLWRRSNQLRASTGLPWRTVVYHDTARRELTKALFSARYQLTGKPDYVLADGKALIPVEVKPQRQAT SPRQGDILQLAAYCLLLEEATGVAPRYGLLRYAQHTFQVDWTDQLYQALLEALDAMRDDLELNDVERSHEQPWRCRACGF GDRCTDALEYD >Mature_171_residues MIWLALGLGLLALWLWRRSNQLRASTGLPWRTVVYHDTARRELTKALFSARYQLTGKPDYVLADGKALIPVEVKPQRQAT SPRQGDILQLAAYCLLLEEATGVAPRYGLLRYAQHTFQVDWTDQLYQALLEALDAMRDDLELNDVERSHEQPWRCRACGF GDRCTDALEYD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19625; Mature: 19625
Theoretical pI: Translated: 6.26; Mature: 6.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIWLALGLGLLALWLWRRSNQLRASTGLPWRTVVYHDTARRELTKALFSARYQLTGKPDY CCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHEECCCCCE VLADGKALIPVEVKPQRQATSPRQGDILQLAAYCLLLEEATGVAPRYGLLRYAQHTFQVD EEECCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHEECC WTDQLYQALLEALDAMRDDLELNDVERSHEQPWRCRACGFGDRCTDALEYD CHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCEEECCCCCCHHCHHCCCC >Mature Secondary Structure MIWLALGLGLLALWLWRRSNQLRASTGLPWRTVVYHDTARRELTKALFSARYQLTGKPDY CCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHEECCCCCE VLADGKALIPVEVKPQRQATSPRQGDILQLAAYCLLLEEATGVAPRYGLLRYAQHTFQVD EEECCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHEECC WTDQLYQALLEALDAMRDDLELNDVERSHEQPWRCRACGFGDRCTDALEYD CHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCEEECCCCCCHHCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA