Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
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Accession | NC_009972 |
Length | 6,346,587 |
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The map label for this gene is 159899358
Identifier: 159899358
GI number: 159899358
Start: 3606100
End: 3606423
Strand: Direct
Name: 159899358
Synonym: Haur_2839
Alternate gene names: NA
Gene position: 3606100-3606423 (Clockwise)
Preceding gene: 159899357
Following gene: 159899359
Centisome position: 56.82
GC content: 48.15
Gene sequence:
>324_bases ATGAAATTTAAAATTCGCCAACATCCACGCATGAAAGATATTTGTGTCGGTGATGAGGTCGTGTGGAATCCCCAATTGCT CTACGCCAATGTCGAGGAAATTTTTCCGGCAGCGGTCTGTGTTAAACTGGCGATTTTGCAGACGGAGCCAATTCCCAAAT TAGAGCTACGCTCACAGCTTTGGCGGGCTGACGATATTGAAAATCTCAGTGTTTGTCGCTGCTGTGGCTCGCGTGAAAAT CTAGTCACGCCCTGTCATACAGGCGTGCCTTTTCGGTTGTGCCAACATTGTTACACCTGCCACATTGAGGAGTCTCTGGC ATGA
Upstream 100 bases:
>100_bases CGCCTGTGGATTTGGCGACCGCTGCACAGATGCGCTAGAATATGACTAGCACATCCCAAGCTTTTGATAATGACGTTGCT AGCAAGCGTTGTGACAAACT
Downstream 100 bases:
>100_bases GCCAACGTATTTACCGCTTGCAAGTAACTAAGGATCAGCTTGGTTTTGCGGCGGCGCATTTTATTACCATGCGCGGCAAA TGTGAGCGGCTGCATGGCCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 107; Mature: 107
Protein sequence:
>107_residues MKFKIRQHPRMKDICVGDEVVWNPQLLYANVEEIFPAAVCVKLAILQTEPIPKLELRSQLWRADDIENLSVCRCCGSREN LVTPCHTGVPFRLCQHCYTCHIEESLA
Sequences:
>Translated_107_residues MKFKIRQHPRMKDICVGDEVVWNPQLLYANVEEIFPAAVCVKLAILQTEPIPKLELRSQLWRADDIENLSVCRCCGSREN LVTPCHTGVPFRLCQHCYTCHIEESLA >Mature_107_residues MKFKIRQHPRMKDICVGDEVVWNPQLLYANVEEIFPAAVCVKLAILQTEPIPKLELRSQLWRADDIENLSVCRCCGSREN LVTPCHTGVPFRLCQHCYTCHIEESLA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12311; Mature: 12311
Theoretical pI: Translated: 6.86; Mature: 6.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
8.4 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 10.3 %Cys+Met (Translated Protein) 8.4 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 10.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFKIRQHPRMKDICVGDEVVWNPQLLYANVEEIFPAAVCVKLAILQTEPIPKLELRSQL CCCCCCCCCCCCCEECCCEEEECCEEEEECHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH WRADDIENLSVCRCCGSRENLVTPCHTGVPFRLCQHCYTCHIEESLA HCCCCCCCCHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCHHCCC >Mature Secondary Structure MKFKIRQHPRMKDICVGDEVVWNPQLLYANVEEIFPAAVCVKLAILQTEPIPKLELRSQL CCCCCCCCCCCCCEECCCEEEECCEEEEECHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH WRADDIENLSVCRCCGSRENLVTPCHTGVPFRLCQHCYTCHIEESLA HCCCCCCCCHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA