Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
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Accession | NC_009972 |
Length | 6,346,587 |
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The map label for this gene is bglA [H]
Identifier: 159899335
GI number: 159899335
Start: 3578831
End: 3581089
Strand: Direct
Name: bglA [H]
Synonym: Haur_2816
Alternate gene names: 159899335
Gene position: 3578831-3581089 (Clockwise)
Preceding gene: 159899333
Following gene: 159899336
Centisome position: 56.39
GC content: 51.97
Gene sequence:
>2259_bases ATGTTCTCGAATGTACGATTTTCTTCCCGTGGAGCATCACGCCTAGCTTTGTTAGCATGTTTGGTGCTCAGCCCAATGCT TTTGTTGGGCCAGCCTCAAAGCACATTTGCCGCCACCAACCTCGCGCTCGGCAAAACTGCCGTCGCCTCGACCAGTGAAA ACGCTGATTTTGGCGCAGCACTGGCACTCGATGGTAACGTGAATACCCGTTGGAGCAGCACGTTTGCCGACGGTCAATGG CTGCGCGTCGATCTTGGCAGCGTCCAAAGCTTCAATAATGTGGTGCTGCGCTGGGAAGCTGCTTACGCCAGCAGCTATCG CATTCAAACTTCAAACGATGCCAACACATGGACAACCATCCAAACCATCACCAATAGCGATGGTAATGTTGACGATTTGA GCATCAGTGGCACAGGTCGCTATGTTCGCGTCGAAAGCATCACCCGCGCCACCCCCTATGGCATCTCGTTGTTTGAATTT GAAGTCTATGGCAATGCTGGCAGCAGCAATATTGCCTTGAACAAAACGACCAGCGCCTCAAGCAGCGAAAATGCTGCAAC GACCGCCAATTTTGCCGTTGATGGCAATGTGAATACTCGTTGGAGCAGCACATTTGCCGATGGTCAATGGCTGCGCGTCG ATTTTGGCAGCGTCCAAAGTTTCAATCGAGTGGTCTTACGCTGGGAAGCTGCCTACGCCACCAGCTATCGGGTGCAAACC TCGAACGATGCTAACAGCTGGACGACCATCCAAACCGTCACGAATAGCGATGGCAATGTTGACGATTTAAGCATCAGCGG TAGTGGCCGCTATGTTCGGATCGAAAGCGTTACTCGCGCCACGCAGTATGGCATTTCGTTGTTCGAGTTGGAAGTGTATA GCGGCAGCATCCAACCAACGGTGCAGCCAACCACCCAACCAACCACTCAACCGACGGTACAGCCAACCGCCCAACCAACT ACTATTCCGGGCAACTGTACAACTTCAACCAATATTGCCTTGAACAAACCAGCCTATGCCTGGTTCTACGAATCGAAAAC CTCAAGCCCAGCCCAAGCCGTCGATGGCAATGCCACGACCACTCGCTGGAGCCATCTCTGGTATCCAAGCGGCCCAGCCA ATGCTTGGTTGTATGTTGATTTAGGCTCAACTAATGCCACAATCAACCGCGTGCGCATCTTGTGGGAATCAGCCTACGCC GCCGATTACCAAATTCAAGTCTCGAATGATCGCAGCAACTGGTCGAACATACGCAGCGTGGTTGGCAACACCCAAACCAC CAACGACTACAATCTCACGCCAATTACTGGGCGCTACCTGCGAATCAACATGACCAAAAAGGGCACTGAATATGGCTACT CCATTTGGGAATTAGAAGTGTATGGCTGTAATGCAGGCAACCCCAGCTATGATCCCGCGCCAACCCCATTGACTGGCAAT TTCAGCCGCGTTTGGGTTGAAAACTTCGATGGCACCAGCCTGAACATGAACAACTGGGCCTATGATAACGATGTTCATGT CAATGGTGAACAACAACAATACACCAGCAACAACGTCGCCGTCAGCGGTGGCACCTTGAAAATCACCGCCCGCAAAGAAA CCGCCAACGGCTATCCTTTCACCTCGGGCCGGATCTTTGGCCTAGGTCGTCAGAGCTTCTTATATGGCAAAATGGTTGCC CGCATGAAGATGCCAGTTGGTGAAGGCTACTGGCCAGCCTTCTGGATGATGGGCGCAAATATCAATGAAGTTGGCTGGCC TGGCAACGGTGAGCTGGATATTATGGAAAATATCGGCTATGGCAACTGGACTTCAGGGGCACTTCACGGCCCAGGCTACT GGGGAGCAGGCTCGGCAGGCGGCTTAGTCAACTTGCCAGCAGGCCAAACCACCGGCGCTTGGCATACCTACGCCGTCGAA TGGGACCCAACCTATATCAAATGGTTCGTCGATGATCGTGAAATTCTGAGCTTCACTCGCGCCCAAATCATCGCCGATTA TGGCCAATGGACGTATAACAATCCCAAGTTCTTTATCTTGAATTTGGCCTTGGGCGGCGAATATCCCGCTGGCTACAACG GCTGTACTGGCAATCCATTGCCAGCAGGCTGTGCCTACTTTGGAGTCAAGCAATCAACCGTCGATAGCATTGTGGCTGGT AATGGCTTGCTCGAAGTTGATTACGTTGAAGTATGGCAAAAACCAGCTGCAACAACCCAAGGTGCTCAATATTTGCCTTT GGCGCAACAAGAAAACTAA
Upstream 100 bases:
>100_bases CTGTTTTTGTAGCACTTGTGGCATTGCAGCAGCAACTCTTAATATGTTTTAATACTCTCACTGAAATAAGTCTGGTCTTT TCACCAAAGGAGCGACAACG
Downstream 100 bases:
>100_bases CCAACTGATCGTTCGATCAGCAACCCGACGGATGCATTAGTGCATTCGTCGGGTTATAGTTTAAGTGGCAAATCCTATCA AGGAGCAAATTCATGTCCAC
Product: glycoside hydrolase family protein
Products: NA
Alternate protein names: 1,3-1,4-beta-D-glucan 4-glucanohydrolase; Endo-beta-1,3-1,4 glucanase; Lichenase [H]
Number of amino acids: Translated: 752; Mature: 752
Protein sequence:
>752_residues MFSNVRFSSRGASRLALLACLVLSPMLLLGQPQSTFAATNLALGKTAVASTSENADFGAALALDGNVNTRWSSTFADGQW LRVDLGSVQSFNNVVLRWEAAYASSYRIQTSNDANTWTTIQTITNSDGNVDDLSISGTGRYVRVESITRATPYGISLFEF EVYGNAGSSNIALNKTTSASSSENAATTANFAVDGNVNTRWSSTFADGQWLRVDFGSVQSFNRVVLRWEAAYATSYRVQT SNDANSWTTIQTVTNSDGNVDDLSISGSGRYVRIESVTRATQYGISLFELEVYSGSIQPTVQPTTQPTTQPTVQPTAQPT TIPGNCTTSTNIALNKPAYAWFYESKTSSPAQAVDGNATTTRWSHLWYPSGPANAWLYVDLGSTNATINRVRILWESAYA ADYQIQVSNDRSNWSNIRSVVGNTQTTNDYNLTPITGRYLRINMTKKGTEYGYSIWELEVYGCNAGNPSYDPAPTPLTGN FSRVWVENFDGTSLNMNNWAYDNDVHVNGEQQQYTSNNVAVSGGTLKITARKETANGYPFTSGRIFGLGRQSFLYGKMVA RMKMPVGEGYWPAFWMMGANINEVGWPGNGELDIMENIGYGNWTSGALHGPGYWGAGSAGGLVNLPAGQTTGAWHTYAVE WDPTYIKWFVDDREILSFTRAQIIADYGQWTYNNPKFFILNLALGGEYPAGYNGCTGNPLPAGCAYFGVKQSTVDSIVAG NGLLEVDYVEVWQKPAATTQGAQYLPLAQQEN
Sequences:
>Translated_752_residues MFSNVRFSSRGASRLALLACLVLSPMLLLGQPQSTFAATNLALGKTAVASTSENADFGAALALDGNVNTRWSSTFADGQW LRVDLGSVQSFNNVVLRWEAAYASSYRIQTSNDANTWTTIQTITNSDGNVDDLSISGTGRYVRVESITRATPYGISLFEF EVYGNAGSSNIALNKTTSASSSENAATTANFAVDGNVNTRWSSTFADGQWLRVDFGSVQSFNRVVLRWEAAYATSYRVQT SNDANSWTTIQTVTNSDGNVDDLSISGSGRYVRIESVTRATQYGISLFELEVYSGSIQPTVQPTTQPTTQPTVQPTAQPT TIPGNCTTSTNIALNKPAYAWFYESKTSSPAQAVDGNATTTRWSHLWYPSGPANAWLYVDLGSTNATINRVRILWESAYA ADYQIQVSNDRSNWSNIRSVVGNTQTTNDYNLTPITGRYLRINMTKKGTEYGYSIWELEVYGCNAGNPSYDPAPTPLTGN FSRVWVENFDGTSLNMNNWAYDNDVHVNGEQQQYTSNNVAVSGGTLKITARKETANGYPFTSGRIFGLGRQSFLYGKMVA RMKMPVGEGYWPAFWMMGANINEVGWPGNGELDIMENIGYGNWTSGALHGPGYWGAGSAGGLVNLPAGQTTGAWHTYAVE WDPTYIKWFVDDREILSFTRAQIIADYGQWTYNNPKFFILNLALGGEYPAGYNGCTGNPLPAGCAYFGVKQSTVDSIVAG NGLLEVDYVEVWQKPAATTQGAQYLPLAQQEN >Mature_752_residues MFSNVRFSSRGASRLALLACLVLSPMLLLGQPQSTFAATNLALGKTAVASTSENADFGAALALDGNVNTRWSSTFADGQW LRVDLGSVQSFNNVVLRWEAAYASSYRIQTSNDANTWTTIQTITNSDGNVDDLSISGTGRYVRVESITRATPYGISLFEF EVYGNAGSSNIALNKTTSASSSENAATTANFAVDGNVNTRWSSTFADGQWLRVDFGSVQSFNRVVLRWEAAYATSYRVQT SNDANSWTTIQTVTNSDGNVDDLSISGSGRYVRIESVTRATQYGISLFELEVYSGSIQPTVQPTTQPTTQPTVQPTAQPT TIPGNCTTSTNIALNKPAYAWFYESKTSSPAQAVDGNATTTRWSHLWYPSGPANAWLYVDLGSTNATINRVRILWESAYA ADYQIQVSNDRSNWSNIRSVVGNTQTTNDYNLTPITGRYLRINMTKKGTEYGYSIWELEVYGCNAGNPSYDPAPTPLTGN FSRVWVENFDGTSLNMNNWAYDNDVHVNGEQQQYTSNNVAVSGGTLKITARKETANGYPFTSGRIFGLGRQSFLYGKMVA RMKMPVGEGYWPAFWMMGANINEVGWPGNGELDIMENIGYGNWTSGALHGPGYWGAGSAGGLVNLPAGQTTGAWHTYAVE WDPTYIKWFVDDREILSFTRAQIIADYGQWTYNNPKFFILNLALGGEYPAGYNGCTGNPLPAGCAYFGVKQSTVDSIVAG NGLLEVDYVEVWQKPAATTQGAQYLPLAQQEN
Specific function: Shows activity on lichenan, beta-glucan and laminarin but not on CMC cellulose or xylan [H]
COG id: COG2273
COG function: function code G; Beta-glucanase/Beta-glucan synthetase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyl hydrolase 16 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008985 - InterPro: IPR013320 - InterPro: IPR000757 - InterPro: IPR008263 [H]
Pfam domain/function: PF00722 Glyco_hydro_16 [H]
EC number: =3.2.1.73 [H]
Molecular weight: Translated: 82078; Mature: 82078
Theoretical pI: Translated: 4.75; Mature: 4.75
Prosite motif: PS50022 FA58C_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFSNVRFSSRGASRLALLACLVLSPMLLLGQPQSTFAATNLALGKTAVASTSENADFGAA CCCCCEECCCCHHHHHHHHHHHHCCHHHCCCCCHHHEEEEEECCCEEEECCCCCCCCCEE LALDGNVNTRWSSTFADGQWLRVDLGSVQSFNNVVLRWEAAYASSYRIQTSNDANTWTTI EEECCCCCCEECCCCCCCCEEEEECCCCCCCCCEEEEEEEECCCEEEEEECCCCCEEEEE QTITNSDGNVDDLSISGTGRYVRVESITRATPYGISLFEFEVYGNAGSSNIALNKTTSAS EEEECCCCCEEEEEECCCCCEEEEEEECCCCCCCEEEEEEEEECCCCCCCEEEEECCCCC SSENAATTANFAVDGNVNTRWSSTFADGQWLRVDFGSVQSFNRVVLRWEAAYATSYRVQT CCCCCEEEEEEEEECCCCCEECCCCCCCEEEEEECCCCCCCCEEEEEEEEEEEEEEEEEE SNDANSWTTIQTVTNSDGNVDDLSISGSGRYVRIESVTRATQYGISLFELEVYSGSIQPT CCCCCCEEEEEEEECCCCCEEEEEECCCCCEEEEEHHHHHHHHCCEEEEEEEECCCCCCC VQPTTQPTTQPTVQPTAQPTTIPGNCTTSTNIALNKPAYAWFYESKTSSPAQAVDGNATT CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCEEEEEEECCCCCCCHHCCCCCCE TRWSHLWYPSGPANAWLYVDLGSTNATINRVRILWESAYAADYQIQVSNDRSNWSNIRSV EEEEEEECCCCCCCEEEEEEECCCCCEEEEEEEEEECCCCCEEEEEECCCCCCHHHHHHH VGNTQTTNDYNLTPITGRYLRINMTKKGTEYGYSIWELEVYGCNAGNPSYDPAPTPLTGN HCCCCCCCCEECCEECCEEEEEEEECCCCCCCEEEEEEEEEEECCCCCCCCCCCCCCCCC FSRVWVENFDGTSLNMNNWAYDNDVHVNGEQQQYTSNNVAVSGGTLKITARKETANGYPF CEEEEEECCCCCEEECCCCCCCCEEEECCCHHEECCCCEEEECCEEEEEEECCCCCCCCC TSGRIFGLGRQSFLYGKMVARMKMPVGEGYWPAFWMMGANINEVGWPGNGELDIMENIGY CCCEEEECCCHHHHHHHHHHHEECCCCCCCCCEEEEECCCCCCCCCCCCCCEEEEECCCC GNWTSGALHGPGYWGAGSAGGLVNLPAGQTTGAWHTYAVEWDPTYIKWFVDDREILSFTR CCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCEEEEEEEECCCEEEEEECCHHHHHHHH AQIIADYGQWTYNNPKFFILNLALGGEYPAGYNGCTGNPLPAGCAYFGVKQSTVDSIVAG HHHHHHCCCEECCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCEEECCCHHHHHHHHCC NGLLEVDYVEVWQKPAATTQGAQYLPLAQQEN CCEEEEHHHHHHCCCCCCCCCCEECCCCCCCC >Mature Secondary Structure MFSNVRFSSRGASRLALLACLVLSPMLLLGQPQSTFAATNLALGKTAVASTSENADFGAA CCCCCEECCCCHHHHHHHHHHHHCCHHHCCCCCHHHEEEEEECCCEEEECCCCCCCCCEE LALDGNVNTRWSSTFADGQWLRVDLGSVQSFNNVVLRWEAAYASSYRIQTSNDANTWTTI EEECCCCCCEECCCCCCCCEEEEECCCCCCCCCEEEEEEEECCCEEEEEECCCCCEEEEE QTITNSDGNVDDLSISGTGRYVRVESITRATPYGISLFEFEVYGNAGSSNIALNKTTSAS EEEECCCCCEEEEEECCCCCEEEEEEECCCCCCCEEEEEEEEECCCCCCCEEEEECCCCC SSENAATTANFAVDGNVNTRWSSTFADGQWLRVDFGSVQSFNRVVLRWEAAYATSYRVQT CCCCCEEEEEEEEECCCCCEECCCCCCCEEEEEECCCCCCCCEEEEEEEEEEEEEEEEEE SNDANSWTTIQTVTNSDGNVDDLSISGSGRYVRIESVTRATQYGISLFELEVYSGSIQPT CCCCCCEEEEEEEECCCCCEEEEEECCCCCEEEEEHHHHHHHHCCEEEEEEEECCCCCCC VQPTTQPTTQPTVQPTAQPTTIPGNCTTSTNIALNKPAYAWFYESKTSSPAQAVDGNATT CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCEEEEEEECCCCCCCHHCCCCCCE TRWSHLWYPSGPANAWLYVDLGSTNATINRVRILWESAYAADYQIQVSNDRSNWSNIRSV EEEEEEECCCCCCCEEEEEEECCCCCEEEEEEEEEECCCCCEEEEEECCCCCCHHHHHHH VGNTQTTNDYNLTPITGRYLRINMTKKGTEYGYSIWELEVYGCNAGNPSYDPAPTPLTGN HCCCCCCCCEECCEECCEEEEEEEECCCCCCCEEEEEEEEEEECCCCCCCCCCCCCCCCC FSRVWVENFDGTSLNMNNWAYDNDVHVNGEQQQYTSNNVAVSGGTLKITARKETANGYPF CEEEEEECCCCCEEECCCCCCCCEEEECCCHHEECCCCEEEECCEEEEEEECCCCCCCCC TSGRIFGLGRQSFLYGKMVARMKMPVGEGYWPAFWMMGANINEVGWPGNGELDIMENIGY CCCEEEECCCHHHHHHHHHHHEECCCCCCCCCEEEEECCCCCCCCCCCCCCEEEEECCCC GNWTSGALHGPGYWGAGSAGGLVNLPAGQTTGAWHTYAVEWDPTYIKWFVDDREILSFTR CCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCEEEEEEEECCCEEEEEECCHHHHHHHH AQIIADYGQWTYNNPKFFILNLALGGEYPAGYNGCTGNPLPAGCAYFGVKQSTVDSIVAG HHHHHHCCCEECCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCEEECCCHHHHHHHHCC NGLLEVDYVEVWQKPAATTQGAQYLPLAQQEN CCEEEEHHHHHHCCCCCCCCCCEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7925416 [H]