Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
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Accession | NC_009972 |
Length | 6,346,587 |
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The map label for this gene is 159899336
Identifier: 159899336
GI number: 159899336
Start: 3581182
End: 3581547
Strand: Direct
Name: 159899336
Synonym: Haur_2817
Alternate gene names: NA
Gene position: 3581182-3581547 (Clockwise)
Preceding gene: 159899335
Following gene: 159899339
Centisome position: 56.43
GC content: 48.09
Gene sequence:
>366_bases ATGTCCACAGTTATCAATCTCGTCGAGAAATTTGGCCATTTCAACGATTATTGTAACCCCCGAGTTGTCGGCGAACTCAA CGGTCAGCAGGTCAAGCTAGTCAAACTTCAAGGGGCTTTCGAGTGGCATCATCATGAGCATGAGGATGAATTATTTTTCG TGGTACAAGGCCGTTTGCGCATGCAGTTACGTGATGGAGACCAAGTGCTCAACCCAGGCGAAATGATCATTGTTCCGCGT TGCGTAGAGCATTGTCCGGTTGCCGAAACCAAGGAAGTTTGGTTGATGTTGTTTGAGCCAGCCACCACCCTTAACACTGG CAACCTACAAAATGAGCGCACTCGCACGGAGCTAGAACACATTTAA
Upstream 100 bases:
>100_bases AAAACTAACCAACTGATCGTTCGATCAGCAACCCGACGGATGCATTAGTGCATTCGTCGGGTTATAGTTTAAGTGGCAAA TCCTATCAAGGAGCAAATTC
Downstream 100 bases:
>100_bases TAGGATCAGCCGCTCAGAATAGTAAACCCTGAGCGGCTGATCACATTGATTAAATTGAGCCGCTCACATAGGCTTGGCCA ATAGTGAAAGTCATCAGCAC
Product: cupin 2 domain-containing protein
Products: NA
Alternate protein names: Cupin 2 Conserved Barrel Domain Protein; Cupin Domain Protein; Mannose-6-Phosphate Isomerase; Cupin 2 Protein; Dsbh Domain Containing Protein; Cupin 2 Conserved Barrel Domain-Containing Protein; DSBH Domain-Containing Protein; Cupin Domain-Containing Protein; Double-Stranded Beta-Helix-Like Protein; Cupin 2 Conserved Barrel; Cupin Domain-Containing; Cupin Region
Number of amino acids: Translated: 121; Mature: 120
Protein sequence:
>121_residues MSTVINLVEKFGHFNDYCNPRVVGELNGQQVKLVKLQGAFEWHHHEHEDELFFVVQGRLRMQLRDGDQVLNPGEMIIVPR CVEHCPVAETKEVWLMLFEPATTLNTGNLQNERTRTELEHI
Sequences:
>Translated_121_residues MSTVINLVEKFGHFNDYCNPRVVGELNGQQVKLVKLQGAFEWHHHEHEDELFFVVQGRLRMQLRDGDQVLNPGEMIIVPR CVEHCPVAETKEVWLMLFEPATTLNTGNLQNERTRTELEHI >Mature_120_residues STVINLVEKFGHFNDYCNPRVVGELNGQQVKLVKLQGAFEWHHHEHEDELFFVVQGRLRMQLRDGDQVLNPGEMIIVPRC VEHCPVAETKEVWLMLFEPATTLNTGNLQNERTRTELEHI
Specific function: Unknown
COG id: COG0662
COG function: function code G; Mannose-6-phosphate isomerase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14077; Mature: 13946
Theoretical pI: Translated: 5.50; Mature: 5.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTVINLVEKFGHFNDYCNPRVVGELNGQQVKLVKLQGAFEWHHHEHEDELFFVVQGRLR CHHHHHHHHHHCCCCCCCCCEEEECCCCCEEEEEEECCCEECCCCCCCCCEEEEEECEEE MQLRDGDQVLNPGEMIIVPRCVEHCPVAETKEVWLMLFEPATTLNTGNLQNERTRTELEH EEEECCCCEECCCCEEEECCHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCCHHHHHHCC I C >Mature Secondary Structure STVINLVEKFGHFNDYCNPRVVGELNGQQVKLVKLQGAFEWHHHEHEDELFFVVQGRLR HHHHHHHHHHCCCCCCCCCEEEECCCCCEEEEEEECCCEECCCCCCCCCEEEEEECEEE MQLRDGDQVLNPGEMIIVPRCVEHCPVAETKEVWLMLFEPATTLNTGNLQNERTRTELEH EEEECCCCEECCCCEEEECCHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCCHHHHHHCC I C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA