Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
---|---|
Accession | NC_009972 |
Length | 6,346,587 |
Click here to switch to the map view.
The map label for this gene is 159899327
Identifier: 159899327
GI number: 159899327
Start: 3570208
End: 3570750
Strand: Direct
Name: 159899327
Synonym: Haur_2808
Alternate gene names: NA
Gene position: 3570208-3570750 (Clockwise)
Preceding gene: 159899325
Following gene: 159899328
Centisome position: 56.25
GC content: 46.59
Gene sequence:
>543_bases ATGGAACATGTGATTCTAGGGTTGTTGATGCTCAGGCAACGCAGCATCTACGAGATCAAGAAAATTCTCGAAGAGACGAT TTCGTTGTTTTATAGTGCCAGCTTTGGCAGCATCAACAGCGCGATTGAAAAATTGGTGGCAAAACAAGCAGTGACGGTGC AGGAGCAGGTTGAGAGTGGGCGATTCAAAAAAATTTATAGCATCACGCCAAGCGGCCAAGCGCTGTTTGAGCAATGGCTG GCGAGCGCAATTCCCCAAGAGAAGGTCAAAGATCCAGCCTTGACCCGTTTGTTTTTTATGGGCTTTCTCGCCCCAAGCGA GCAAATTCGGCTCTTGCGTGAACATCTTGGGAGTGTGCAAATAGTACATGCCCAACTCAACAGCTTGTTGCGTGAGCGCG AGCAAATCAATGTGGCAGCTGAACAACAAGCGCTCGCCGATTTTCAATGGCTAACCTTGGAATATGGTGTAGCCTACTAC AGTTTCAATATTAATTGGTATCAACAACTGCTAAGCAAACTTGAGGAATCTGGCAATGAGTAA
Upstream 100 bases:
>100_bases CGAGCACGATCATAGCAAATCAGCGCAAGCACTTCAAATTGCGAGGCTTGACAATCGCTTAATCTATATTACTATTAGAT ATATAACGCAAGGATATATT
Downstream 100 bases:
>100_bases TCAATTAAGCGCTAAAACGATTAATATACACGATTTTGATTTACACTACTATACCGTAGGCAACCCCGACAACCCAGCTT TGATCTTAATTCATCCAGCG
Product: PadR-like family transcriptional regulator
Products: NA
Alternate protein names: PadR-Like Family Transcriptional Regulator; Transcriptional Regulator PadR-Like Family; Transcriptional Regulator; Transcriptional Repressor Of PadC; Transcriptional Repressor
Number of amino acids: Translated: 180; Mature: 180
Protein sequence:
>180_residues MEHVILGLLMLRQRSIYEIKKILEETISLFYSASFGSINSAIEKLVAKQAVTVQEQVESGRFKKIYSITPSGQALFEQWL ASAIPQEKVKDPALTRLFFMGFLAPSEQIRLLREHLGSVQIVHAQLNSLLREREQINVAAEQQALADFQWLTLEYGVAYY SFNINWYQQLLSKLEESGNE
Sequences:
>Translated_180_residues MEHVILGLLMLRQRSIYEIKKILEETISLFYSASFGSINSAIEKLVAKQAVTVQEQVESGRFKKIYSITPSGQALFEQWL ASAIPQEKVKDPALTRLFFMGFLAPSEQIRLLREHLGSVQIVHAQLNSLLREREQINVAAEQQALADFQWLTLEYGVAYY SFNINWYQQLLSKLEESGNE >Mature_180_residues MEHVILGLLMLRQRSIYEIKKILEETISLFYSASFGSINSAIEKLVAKQAVTVQEQVESGRFKKIYSITPSGQALFEQWL ASAIPQEKVKDPALTRLFFMGFLAPSEQIRLLREHLGSVQIVHAQLNSLLREREQINVAAEQQALADFQWLTLEYGVAYY SFNINWYQQLLSKLEESGNE
Specific function: Unknown
COG id: COG1695
COG function: function code K; Predicted transcriptional regulators
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20642; Mature: 20642
Theoretical pI: Translated: 5.74; Mature: 5.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEHVILGLLMLRQRSIYEIKKILEETISLFYSASFGSINSAIEKLVAKQAVTVQEQVESG CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCC RFKKIYSITPSGQALFEQWLASAIPQEKVKDPALTRLFFMGFLAPSEQIRLLREHLGSVQ CCCEEEEECCCCHHHHHHHHHHHCCHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCHH IVHAQLNSLLREREQINVAAEQQALADFQWLTLEYGVAYYSFNINWYQQLLSKLEESGNE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECHHHHHHHHHHHHHCCCC >Mature Secondary Structure MEHVILGLLMLRQRSIYEIKKILEETISLFYSASFGSINSAIEKLVAKQAVTVQEQVESG CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCC RFKKIYSITPSGQALFEQWLASAIPQEKVKDPALTRLFFMGFLAPSEQIRLLREHLGSVQ CCCEEEEECCCCHHHHHHHHHHHCCHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCHH IVHAQLNSLLREREQINVAAEQQALADFQWLTLEYGVAYYSFNINWYQQLLSKLEESGNE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA