Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
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Accession | NC_009972 |
Length | 6,346,587 |
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The map label for this gene is menH [H]
Identifier: 159899328
GI number: 159899328
Start: 3570743
End: 3571558
Strand: Direct
Name: menH [H]
Synonym: Haur_2809
Alternate gene names: 159899328
Gene position: 3570743-3571558 (Clockwise)
Preceding gene: 159899327
Following gene: 159899329
Centisome position: 56.26
GC content: 45.47
Gene sequence:
>816_bases ATGAGTAATCAATTAAGCGCTAAAACGATTAATATACACGATTTTGATTTACACTACTATACCGTAGGCAACCCCGACAA CCCAGCTTTGATCTTAATTCATCCAGCGTTTGGCGATCATCAATGCTTTGCTCAGCAGATTGATAGCTTCGCCAAATTGC ATTATGTCATCTTAATCGATTTACCTGGTCATGGTCGTTCGCAACCAAGCAAAGCCTTGATTGGCATCGAACGCACACCT GAATATTTGGCCGCCATCTTGCAAAACGAAAACCAAGCACAAGCTCATGTGTTGGGCGTTTCGCTTGGCTCGTTGATCGC TCAAGAATTCGCCTATCGGTATCCGCATTTGGTGGCTAGCGTGACGGTTGTTGGTGGCTACAGTATTTTTGGCGATCAAC GGGCGGTGATGCGGGCGCAACGCAAAGAAATGCTCAAATGGATGTTCATGGTGCTATTTTCAATTGAGCGTTTTCGGCGC TATGTGGCAAAGATCAGCGTGTTTTATTCGGCTGGTCAGGAATTATTTTATCAACGTATGCAGTTTTTTTCGCGCTCATC ATTTCGCTTGATGAGCAAGTTGAATCAAATTATGCATCCAAACGAAGTAGCACCCCAACAAAAACTCTTGGTTTTGGTGG GCGAGCACGATCAGCCAATTGCCTTGCAAGCAGCCCGCGAATGGCAACAACAGCAACCAACGATCGACTACCATGTGCTA CCAAACGCTGGGCATTGCGCCAATATGGATAATCCAACGCTTTTCAATCAATTGGTGCTCGATTTTCTGCATTCCGCCCC AAAACCGCATAATTAA
Upstream 100 bases:
>100_bases GCCGATTTTCAATGGCTAACCTTGGAATATGGTGTAGCCTACTACAGTTTCAATATTAATTGGTATCAACAACTGCTAAG CAAACTTGAGGAATCTGGCA
Downstream 100 bases:
>100_bases TCCTGTAACAACTGCGTAACATCGCGGCGCTATGCTCAAAATATATCATTTTGAAGCAAACGAGGCCGCAATGCAAACAC TCCTTTGGTGGATTTACTGG
Product: alpha/beta hydrolase fold-domain containing protein
Products: NA
Alternate protein names: SHCHC synthase [H]
Number of amino acids: Translated: 271; Mature: 270
Protein sequence:
>271_residues MSNQLSAKTINIHDFDLHYYTVGNPDNPALILIHPAFGDHQCFAQQIDSFAKLHYVILIDLPGHGRSQPSKALIGIERTP EYLAAILQNENQAQAHVLGVSLGSLIAQEFAYRYPHLVASVTVVGGYSIFGDQRAVMRAQRKEMLKWMFMVLFSIERFRR YVAKISVFYSAGQELFYQRMQFFSRSSFRLMSKLNQIMHPNEVAPQQKLLVLVGEHDQPIALQAAREWQQQQPTIDYHVL PNAGHCANMDNPTLFNQLVLDFLHSAPKPHN
Sequences:
>Translated_271_residues MSNQLSAKTINIHDFDLHYYTVGNPDNPALILIHPAFGDHQCFAQQIDSFAKLHYVILIDLPGHGRSQPSKALIGIERTP EYLAAILQNENQAQAHVLGVSLGSLIAQEFAYRYPHLVASVTVVGGYSIFGDQRAVMRAQRKEMLKWMFMVLFSIERFRR YVAKISVFYSAGQELFYQRMQFFSRSSFRLMSKLNQIMHPNEVAPQQKLLVLVGEHDQPIALQAAREWQQQQPTIDYHVL PNAGHCANMDNPTLFNQLVLDFLHSAPKPHN >Mature_270_residues SNQLSAKTINIHDFDLHYYTVGNPDNPALILIHPAFGDHQCFAQQIDSFAKLHYVILIDLPGHGRSQPSKALIGIERTPE YLAAILQNENQAQAHVLGVSLGSLIAQEFAYRYPHLVASVTVVGGYSIFGDQRAVMRAQRKEMLKWMFMVLFSIERFRRY VAKISVFYSAGQELFYQRMQFFSRSSFRLMSKLNQIMHPNEVAPQQKLLVLVGEHDQPIALQAAREWQQQQPTIDYHVLP NAGHCANMDNPTLFNQLVLDFLHSAPKPHN
Specific function: Catalyzes a proton abstraction reaction that results in 2,5-elimination of pyruvate from 2-succinyl-5-enolpyruvyl-6- hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC) and the formation of 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate (SHCHC). Is also
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the AB hydrolase superfamily. MenH family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000073 - InterPro: IPR022485 [H]
Pfam domain/function: PF00561 Abhydrolase_1 [H]
EC number: =4.2.99.20 [H]
Molecular weight: Translated: 30916; Mature: 30785
Theoretical pI: Translated: 8.27; Mature: 8.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNQLSAKTINIHDFDLHYYTVGNPDNPALILIHPAFGDHQCFAQQIDSFAKLHYVILID CCCCCCCEEEEEEEEEEEEEECCCCCCCEEEEEECCCCCHHHHHHHHHHHHHEEEEEEEE LPGHGRSQPSKALIGIERTPEYLAAILQNENQAQAHVLGVSLGSLIAQEFAYRYPHLVAS CCCCCCCCCCCEEEECCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHH VTVVGGYSIFGDQRAVMRAQRKEMLKWMFMVLFSIERFRRYVAKISVFYSAGQELFYQRM HHEECCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QFFSRSSFRLMSKLNQIMHPNEVAPQQKLLVLVGEHDQPIALQAAREWQQQQPTIDYHVL HHHCCCHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHCCCCEEEEEC PNAGHCANMDNPTLFNQLVLDFLHSAPKPHN CCCCCCCCCCCHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure SNQLSAKTINIHDFDLHYYTVGNPDNPALILIHPAFGDHQCFAQQIDSFAKLHYVILID CCCCCCEEEEEEEEEEEEEECCCCCCCEEEEEECCCCCHHHHHHHHHHHHHEEEEEEEE LPGHGRSQPSKALIGIERTPEYLAAILQNENQAQAHVLGVSLGSLIAQEFAYRYPHLVAS CCCCCCCCCCCEEEECCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHH VTVVGGYSIFGDQRAVMRAQRKEMLKWMFMVLFSIERFRRYVAKISVFYSAGQELFYQRM HHEECCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QFFSRSSFRLMSKLNQIMHPNEVAPQQKLLVLVGEHDQPIALQAAREWQQQQPTIDYHVL HHHCCCHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHCCCCEEEEEC PNAGHCANMDNPTLFNQLVLDFLHSAPKPHN CCCCCCCCCCCHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA