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The map label for this gene is rhlG [H]

Identifier: 159899298

GI number: 159899298

Start: 3536888

End: 3537559

Strand: Direct

Name: rhlG [H]

Synonym: Haur_2779

Alternate gene names: 159899298

Gene position: 3536888-3537559 (Clockwise)

Preceding gene: 159899297

Following gene: 159899299

Centisome position: 55.73

GC content: 52.53

Gene sequence:

>672_bases
ATGCAACGCATTGGATTAATTACCGGGGCTTCGCGTGGTTTAGGCCTAGCCTTAGCCCAACAATTAGCCTTGAATGGCTG
GCACTTAATTATTACTGGCCGTGGAGCAACCGCGCTTGAGCAGGCTCGCGCCGCTTTGGCAACGCACACGACAGTTCAGG
CAATTGCTGGCGATATTGCCGACCCAGCCCATCGCCAAGCGTTGGCGGTTGCAACCCAAGCATGGGGGGGCTTAGATCTT
TTGGTGAATAATGCCAGCATTTTGGGGCCAAGTCCCCAGCCAAATCTGCTCGATTACCCGCTTGATAATTTAGCTCAAGT
GTATGCAATTAATGTATTTGCGCCATTGGCAGCAATTCAAACATTAGCCCCAAGCTTCAAGCCAAGCATTCGAATTATCA
ATATCAGCAGCGATGCGGCAGTACAAGCCTACGAGGGTTGGGGTGGCTATGGCTCAAGCAAGGCCGCACTCGACCAACTA
ACCGCAATTTTGGCCGCCGAACAGCCAACATGGCGGGTGTATGCCCTCGATCCAGGCGATATGAACACCCAAATGCATCA
AGAGGCCTTTCCTGGCGAAGATATCAGCGATCGGCCACCACCAGAAGCGAGTGTACCTACAATTCTGCGCCTGATTAACG
ATGATCTGCCGAGTGGGCGCTATCGGAAGTAA

Upstream 100 bases:

>100_bases
AAACTTTAGCCGGAATTTTTATTGTGAATTTTGATGCCCATGGCCAAGCTAGCGAACTTCGCGAATGGTGGTTGGCGCAG
GCAGTCGAGGAGCAACAGAT

Downstream 100 bases:

>100_bases
CGAACACGGTAACAGGGGTCAGGCACTGGAAGTCAAAAGGCAGAAGTCAAAAATCAAAAGGGGCATCATTTTAACGCTGA
GGCCCAAAGCGATAAGGCTA

Product: short-chain dehydrogenase/reductase SDR

Products: NA

Alternate protein names: 3-ketoacyl-acyl carrier protein reductase [H]

Number of amino acids: Translated: 223; Mature: 223

Protein sequence:

>223_residues
MQRIGLITGASRGLGLALAQQLALNGWHLIITGRGATALEQARAALATHTTVQAIAGDIADPAHRQALAVATQAWGGLDL
LVNNASILGPSPQPNLLDYPLDNLAQVYAINVFAPLAAIQTLAPSFKPSIRIINISSDAAVQAYEGWGGYGSSKAALDQL
TAILAAEQPTWRVYALDPGDMNTQMHQEAFPGEDISDRPPPEASVPTILRLINDDLPSGRYRK

Sequences:

>Translated_223_residues
MQRIGLITGASRGLGLALAQQLALNGWHLIITGRGATALEQARAALATHTTVQAIAGDIADPAHRQALAVATQAWGGLDL
LVNNASILGPSPQPNLLDYPLDNLAQVYAINVFAPLAAIQTLAPSFKPSIRIINISSDAAVQAYEGWGGYGSSKAALDQL
TAILAAEQPTWRVYALDPGDMNTQMHQEAFPGEDISDRPPPEASVPTILRLINDDLPSGRYRK
>Mature_223_residues
MQRIGLITGASRGLGLALAQQLALNGWHLIITGRGATALEQARAALATHTTVQAIAGDIADPAHRQALAVATQAWGGLDL
LVNNASILGPSPQPNLLDYPLDNLAQVYAINVFAPLAAIQTLAPSFKPSIRIINISSDAAVQAYEGWGGYGSSKAALDQL
TAILAAEQPTWRVYALDPGDMNTQMHQEAFPGEDISDRPPPEASVPTILRLINDDLPSGRYRK

Specific function: Required for the synthesis of the beta-hydroxy acid moiety of rhamnolipids [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]

Homologues:

Organism=Homo sapiens, GI4507185, Length=204, Percent_Identity=33.3333333333333, Blast_Score=71, Evalue=7e-13,
Organism=Homo sapiens, GI32483357, Length=195, Percent_Identity=28.7179487179487, Blast_Score=68, Evalue=7e-12,
Organism=Escherichia coli, GI1787526, Length=225, Percent_Identity=29.7777777777778, Blast_Score=65, Evalue=3e-12,
Organism=Caenorhabditis elegans, GI193204405, Length=191, Percent_Identity=34.0314136125654, Blast_Score=77, Evalue=6e-15,
Organism=Caenorhabditis elegans, GI17538486, Length=191, Percent_Identity=30.3664921465969, Blast_Score=72, Evalue=3e-13,
Organism=Caenorhabditis elegans, GI17562908, Length=191, Percent_Identity=31.413612565445, Blast_Score=69, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI17560332, Length=191, Percent_Identity=31.9371727748691, Blast_Score=69, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI17562906, Length=187, Percent_Identity=33.1550802139037, Blast_Score=68, Evalue=5e-12,
Organism=Caenorhabditis elegans, GI17551412, Length=200, Percent_Identity=29.5, Blast_Score=67, Evalue=9e-12,
Organism=Caenorhabditis elegans, GI17559104, Length=188, Percent_Identity=30.3191489361702, Blast_Score=66, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI17562910, Length=231, Percent_Identity=25.974025974026, Blast_Score=66, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI71994604, Length=199, Percent_Identity=30.1507537688442, Blast_Score=66, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI17560150, Length=187, Percent_Identity=30.4812834224599, Blast_Score=65, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI71994600, Length=202, Percent_Identity=28.2178217821782, Blast_Score=65, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI17538480, Length=197, Percent_Identity=29.9492385786802, Blast_Score=65, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI115534694, Length=209, Percent_Identity=30.622009569378, Blast_Score=64, Evalue=9e-11,
Organism=Saccharomyces cerevisiae, GI6322227, Length=220, Percent_Identity=30.4545454545455, Blast_Score=86, Evalue=4e-18,
Organism=Saccharomyces cerevisiae, GI6322226, Length=190, Percent_Identity=29.4736842105263, Blast_Score=82, Evalue=5e-17,
Organism=Drosophila melanogaster, GI23397609, Length=193, Percent_Identity=33.6787564766839, Blast_Score=92, Evalue=3e-19,
Organism=Drosophila melanogaster, GI24644339, Length=194, Percent_Identity=31.9587628865979, Blast_Score=75, Evalue=4e-14,
Organism=Drosophila melanogaster, GI28571526, Length=205, Percent_Identity=32.6829268292683, Blast_Score=72, Evalue=2e-13,
Organism=Drosophila melanogaster, GI24643142, Length=195, Percent_Identity=31.2820512820513, Blast_Score=72, Evalue=3e-13,
Organism=Drosophila melanogaster, GI21357041, Length=200, Percent_Identity=30.5, Blast_Score=66, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002198
- InterPro:   IPR002347
- InterPro:   IPR016040 [H]

Pfam domain/function: PF00106 adh_short [H]

EC number: =1.1.1.100 [H]

Molecular weight: Translated: 23618; Mature: 23618

Theoretical pI: Translated: 5.16; Mature: 5.16

Prosite motif: PS00061 ADH_SHORT

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQRIGLITGASRGLGLALAQQLALNGWHLIITGRGATALEQARAALATHTTVQAIAGDIA
CCCEEEEECCCCCHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCC
DPAHRQALAVATQAWGGLDLLVNNASILGPSPQPNLLDYPLDNLAQVYAINVFAPLAAIQ
CHHHHHHHHHHHHCCCCEEEEEECCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
TLAPSFKPSIRIINISSDAAVQAYEGWGGYGSSKAALDQLTAILAAEQPTWRVYALDPGD
HHCCCCCCCEEEEEECCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCC
MNTQMHQEAFPGEDISDRPPPEASVPTILRLINDDLPSGRYRK
CCHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MQRIGLITGASRGLGLALAQQLALNGWHLIITGRGATALEQARAALATHTTVQAIAGDIA
CCCEEEEECCCCCHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCC
DPAHRQALAVATQAWGGLDLLVNNASILGPSPQPNLLDYPLDNLAQVYAINVFAPLAAIQ
CHHHHHHHHHHHHCCCCEEEEEECCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
TLAPSFKPSIRIINISSDAAVQAYEGWGGYGSSKAALDQLTAILAAEQPTWRVYALDPGD
HHCCCCCCCEEEEEECCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCC
MNTQMHQEAFPGEDISDRPPPEASVPTILRLINDDLPSGRYRK
CCHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9721281; 10984043 [H]