Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
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Accession | NC_009972 |
Length | 6,346,587 |
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The map label for this gene is yhaZ [H]
Identifier: 159899266
GI number: 159899266
Start: 3502627
End: 3503403
Strand: Direct
Name: yhaZ [H]
Synonym: Haur_2747
Alternate gene names: 159899266
Gene position: 3502627-3503403 (Clockwise)
Preceding gene: 159899258
Following gene: 159899267
Centisome position: 55.19
GC content: 51.61
Gene sequence:
>777_bases ATGGCTGAATCACGCAAGGGCGCAACCAAACTAGCCAATATTCCGCCCGACATTTTACAGCAACTCAATACTGGTCAACT TGCTACTGCTAATTTAATGGAAGGCTTGGCGATCGATTTTCAGCAATTAGTGCAACATTGTTTTGCTGAATTGCCTGCCA CTGCTTTGGCAAGATATGATCCAACGACGGGAGTCGTCAAGCGCATGCAAACAATGGGCCAAATTCTCAATCAACAGCTA GGCTTTGGGGCGTTCAATCGCGTAGCAACCCATCAAGCCGATACGGTGCGCGGTTGGGCCGCCTTTATGCTGGCCGATCA GGCTGATTTGAGCATTGTCGAGCGATTAAAGTTGGTACAACCCTTGGCTGATGATGCTCATTTTGGCGTGCGCGAATGGG CTTGGCTGGCATTGCGACCACAGCTTGCTGCCGATTTAGCCACGAGCCTGAGTGAATTGCAAACTTGGGTTGGTCATAGT TCGGAGAATATTCGGCGCTTTGCAATTGAGTCGTTGCGCCCGCGCGGCGTTTGGTGCAGCCATATCAATCAATTAAAACA AAACCCTAGCTTGGCGCTCGAGCTTTTAACCCCAGTGCGCTCCGATGCCAGCCGCTATGTCCAGCTTTCAGTTGCCAATT GGCTCAACGATGCCAGCAAAGCCCAGCCAAGTTGGGTTGAGCAATTAACCACGCAATGGCTGGCTGAATCGCCAAGCGCT GAAACCCGCTGGATCGTGAACCATGCCACTCGGAGTTTGCGCAAAGCCAAGGGCTAA
Upstream 100 bases:
>100_bases TTTGAGCCTAACCAAACCACATAAATATGCTTATTGCCGATTGATGATTGCTTTAGTATCATACAAACGAACATTTGAGC GATTATTCAAAGGATTCTCA
Downstream 100 bases:
>100_bases AATTGCCAAACAGCAAACGAATCGGTAGATAGACCGATCTCACATTGGGCTATTTCGGTTAAGCTATGCGGTAGCTCGGA TGTTTGTATGACATGGGATC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 258; Mature: 257
Protein sequence:
>258_residues MAESRKGATKLANIPPDILQQLNTGQLATANLMEGLAIDFQQLVQHCFAELPATALARYDPTTGVVKRMQTMGQILNQQL GFGAFNRVATHQADTVRGWAAFMLADQADLSIVERLKLVQPLADDAHFGVREWAWLALRPQLAADLATSLSELQTWVGHS SENIRRFAIESLRPRGVWCSHINQLKQNPSLALELLTPVRSDASRYVQLSVANWLNDASKAQPSWVEQLTTQWLAESPSA ETRWIVNHATRSLRKAKG
Sequences:
>Translated_258_residues MAESRKGATKLANIPPDILQQLNTGQLATANLMEGLAIDFQQLVQHCFAELPATALARYDPTTGVVKRMQTMGQILNQQL GFGAFNRVATHQADTVRGWAAFMLADQADLSIVERLKLVQPLADDAHFGVREWAWLALRPQLAADLATSLSELQTWVGHS SENIRRFAIESLRPRGVWCSHINQLKQNPSLALELLTPVRSDASRYVQLSVANWLNDASKAQPSWVEQLTTQWLAESPSA ETRWIVNHATRSLRKAKG >Mature_257_residues AESRKGATKLANIPPDILQQLNTGQLATANLMEGLAIDFQQLVQHCFAELPATALARYDPTTGVVKRMQTMGQILNQQLG FGAFNRVATHQADTVRGWAAFMLADQADLSIVERLKLVQPLADDAHFGVREWAWLALRPQLAADLATSLSELQTWVGHSS ENIRRFAIESLRPRGVWCSHINQLKQNPSLALELLTPVRSDASRYVQLSVANWLNDASKAQPSWVEQLTTQWLAESPSAE TRWIVNHATRSLRKAKG
Specific function: Unknown
COG id: COG4335
COG function: function code L; DNA alkylation repair enzyme
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HEAT repeat [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011989 - InterPro: IPR016024 - InterPro: IPR000357 - InterPro: IPR021133 [H]
Pfam domain/function: PF02985 HEAT [H]
EC number: NA
Molecular weight: Translated: 28685; Mature: 28554
Theoretical pI: Translated: 8.75; Mature: 8.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAESRKGATKLANIPPDILQQLNTGQLATANLMEGLAIDFQQLVQHCFAELPATALARYD CCCCCCCCHHHCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCC PTTGVVKRMQTMGQILNQQLGFGAFNRVATHQADTVRGWAAFMLADQADLSIVERLKLVQ CHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCHHHHHHHHHHHHHCHHHHHHHHHHHHHH PLADDAHFGVREWAWLALRPQLAADLATSLSELQTWVGHSSENIRRFAIESLRPRGVWCS HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHH HINQLKQNPSLALELLTPVRSDASRYVQLSVANWLNDASKAQPSWVEQLTTQWLAESPSA HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCC ETRWIVNHATRSLRKAKG CHHHHHHHHHHHHHHCCC >Mature Secondary Structure AESRKGATKLANIPPDILQQLNTGQLATANLMEGLAIDFQQLVQHCFAELPATALARYD CCCCCCCHHHCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCC PTTGVVKRMQTMGQILNQQLGFGAFNRVATHQADTVRGWAAFMLADQADLSIVERLKLVQ CHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCHHHHHHHHHHHHHCHHHHHHHHHHHHHH PLADDAHFGVREWAWLALRPQLAADLATSLSELQTWVGHSSENIRRFAIESLRPRGVWCS HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHH HINQLKQNPSLALELLTPVRSDASRYVQLSVANWLNDASKAQPSWVEQLTTQWLAESPSA HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCC ETRWIVNHATRSLRKAKG CHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]