The gene/protein map for NC_006270 is currently unavailable.
Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

Click here to switch to the map view.

The map label for this gene is 159899258

Identifier: 159899258

GI number: 159899258

Start: 3495638

End: 3496348

Strand: Direct

Name: 159899258

Synonym: Haur_2739

Alternate gene names: NA

Gene position: 3495638-3496348 (Clockwise)

Preceding gene: 159899257

Following gene: 159899266

Centisome position: 55.08

GC content: 49.93

Gene sequence:

>711_bases
ATGAGTGAAGAACCAAACCAAGCAGATCAACCTCAGCCGCCGTCTGCCAATTATGGCTATCAGCCGTATGATCAGCAGCA
AACTTACCCAAGTTACAACTCCCAACCAAGCTATAGCGTGCCAGCAACGACTGATAACAATACCAATGCTCCCAATCGTT
GGCGGCGCTGGGTTGGCTACAACGCTTTAGCATTTGGCCTAAGTTGTGTCATTATGCCCTTGGGCTGTTGCGTCATGTCG
GTCGTCGCCAATGTGCTGCGCAGCGGTTTGCAGGAATTGGTCGATAATCCCAACTTTAATCTTGCTGGGGCAATTGGGGT
TTTCGTGCTACTCAGTTTTCCGCTCTTTCTGACCATCGGCGTTGCCAGCATGATTCAACGAGCAGCCTTGTACCACCAAA
TGCCCACCAAATTATGGGTTTTCGGCAGTGCCCTCAGTGGCATCGCTGCAATGTTTGTGGCAATAATGTTGATGGGAATG
ATCGCAGCGCTATTTAATCTCGACTTCACGCCAAATGCCTATATTTTGAGCATCGTTGGCATCTTTGCTGGTACATCAAC
TGGCATTGGCTTTTTTCAATGGTGGCAAATTCGGCGGGTTGTAATTAATGCTTGGCACTGGCCGCTGATCTCCGGCGCAA
CGTGGACTGGCCTTGGCACGCTGATTCTTGGCGTAGGGATGAGCTATCTCTACAACCGCTTAGGCATTTAG

Upstream 100 bases:

>100_bases
GTGGGCATTGATTAGCATCATCACGTGGACAGGCCTTGGAACATTAATTTTTGGTTTTGGCCTTAGCTATTTGGTACGAC
GCTAGCCCAAGGAGTAGCCG

Downstream 100 bases:

>100_bases
CGAATGCCCAACATCGCCAAGCCCATCGGCAAATCGCGGGCGGTGCGAATGTTGGTAAGATGAATGCCCGCCCGAATCAG
GCCTTCAATCAAGCTTGGGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 236; Mature: 235

Protein sequence:

>236_residues
MSEEPNQADQPQPPSANYGYQPYDQQQTYPSYNSQPSYSVPATTDNNTNAPNRWRRWVGYNALAFGLSCVIMPLGCCVMS
VVANVLRSGLQELVDNPNFNLAGAIGVFVLLSFPLFLTIGVASMIQRAALYHQMPTKLWVFGSALSGIAAMFVAIMLMGM
IAALFNLDFTPNAYILSIVGIFAGTSTGIGFFQWWQIRRVVINAWHWPLISGATWTGLGTLILGVGMSYLYNRLGI

Sequences:

>Translated_236_residues
MSEEPNQADQPQPPSANYGYQPYDQQQTYPSYNSQPSYSVPATTDNNTNAPNRWRRWVGYNALAFGLSCVIMPLGCCVMS
VVANVLRSGLQELVDNPNFNLAGAIGVFVLLSFPLFLTIGVASMIQRAALYHQMPTKLWVFGSALSGIAAMFVAIMLMGM
IAALFNLDFTPNAYILSIVGIFAGTSTGIGFFQWWQIRRVVINAWHWPLISGATWTGLGTLILGVGMSYLYNRLGI
>Mature_235_residues
SEEPNQADQPQPPSANYGYQPYDQQQTYPSYNSQPSYSVPATTDNNTNAPNRWRRWVGYNALAFGLSCVIMPLGCCVMSV
VANVLRSGLQELVDNPNFNLAGAIGVFVLLSFPLFLTIGVASMIQRAALYHQMPTKLWVFGSALSGIAAMFVAIMLMGMI
AALFNLDFTPNAYILSIVGIFAGTSTGIGFFQWWQIRRVVINAWHWPLISGATWTGLGTLILGVGMSYLYNRLGI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25920; Mature: 25789

Theoretical pI: Translated: 8.03; Mature: 8.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEEPNQADQPQPPSANYGYQPYDQQQTYPSYNSQPSYSVPATTDNNTNAPNRWRRWVGY
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCH
NALAFGLSCVIMPLGCCVMSVVANVLRSGLQELVDNPNFNLAGAIGVFVLLSFPLFLTIG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH
VASMIQRAALYHQMPTKLWVFGSALSGIAAMFVAIMLMGMIAALFNLDFTPNAYILSIVG
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH
IFAGTSTGIGFFQWWQIRRVVINAWHWPLISGATWTGLGTLILGVGMSYLYNRLGI
HHHCCCCCCHHHHHHHHHHHHHHHHCCHHCCCCCHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SEEPNQADQPQPPSANYGYQPYDQQQTYPSYNSQPSYSVPATTDNNTNAPNRWRRWVGY
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCH
NALAFGLSCVIMPLGCCVMSVVANVLRSGLQELVDNPNFNLAGAIGVFVLLSFPLFLTIG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH
VASMIQRAALYHQMPTKLWVFGSALSGIAAMFVAIMLMGMIAALFNLDFTPNAYILSIVG
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH
IFAGTSTGIGFFQWWQIRRVVINAWHWPLISGATWTGLGTLILGVGMSYLYNRLGI
HHHCCCCCCHHHHHHHHHHHHHHHHCCHHCCCCCHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA