Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
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Accession | NC_009972 |
Length | 6,346,587 |
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The map label for this gene is 159899258
Identifier: 159899258
GI number: 159899258
Start: 3495638
End: 3496348
Strand: Direct
Name: 159899258
Synonym: Haur_2739
Alternate gene names: NA
Gene position: 3495638-3496348 (Clockwise)
Preceding gene: 159899257
Following gene: 159899266
Centisome position: 55.08
GC content: 49.93
Gene sequence:
>711_bases ATGAGTGAAGAACCAAACCAAGCAGATCAACCTCAGCCGCCGTCTGCCAATTATGGCTATCAGCCGTATGATCAGCAGCA AACTTACCCAAGTTACAACTCCCAACCAAGCTATAGCGTGCCAGCAACGACTGATAACAATACCAATGCTCCCAATCGTT GGCGGCGCTGGGTTGGCTACAACGCTTTAGCATTTGGCCTAAGTTGTGTCATTATGCCCTTGGGCTGTTGCGTCATGTCG GTCGTCGCCAATGTGCTGCGCAGCGGTTTGCAGGAATTGGTCGATAATCCCAACTTTAATCTTGCTGGGGCAATTGGGGT TTTCGTGCTACTCAGTTTTCCGCTCTTTCTGACCATCGGCGTTGCCAGCATGATTCAACGAGCAGCCTTGTACCACCAAA TGCCCACCAAATTATGGGTTTTCGGCAGTGCCCTCAGTGGCATCGCTGCAATGTTTGTGGCAATAATGTTGATGGGAATG ATCGCAGCGCTATTTAATCTCGACTTCACGCCAAATGCCTATATTTTGAGCATCGTTGGCATCTTTGCTGGTACATCAAC TGGCATTGGCTTTTTTCAATGGTGGCAAATTCGGCGGGTTGTAATTAATGCTTGGCACTGGCCGCTGATCTCCGGCGCAA CGTGGACTGGCCTTGGCACGCTGATTCTTGGCGTAGGGATGAGCTATCTCTACAACCGCTTAGGCATTTAG
Upstream 100 bases:
>100_bases GTGGGCATTGATTAGCATCATCACGTGGACAGGCCTTGGAACATTAATTTTTGGTTTTGGCCTTAGCTATTTGGTACGAC GCTAGCCCAAGGAGTAGCCG
Downstream 100 bases:
>100_bases CGAATGCCCAACATCGCCAAGCCCATCGGCAAATCGCGGGCGGTGCGAATGTTGGTAAGATGAATGCCCGCCCGAATCAG GCCTTCAATCAAGCTTGGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 236; Mature: 235
Protein sequence:
>236_residues MSEEPNQADQPQPPSANYGYQPYDQQQTYPSYNSQPSYSVPATTDNNTNAPNRWRRWVGYNALAFGLSCVIMPLGCCVMS VVANVLRSGLQELVDNPNFNLAGAIGVFVLLSFPLFLTIGVASMIQRAALYHQMPTKLWVFGSALSGIAAMFVAIMLMGM IAALFNLDFTPNAYILSIVGIFAGTSTGIGFFQWWQIRRVVINAWHWPLISGATWTGLGTLILGVGMSYLYNRLGI
Sequences:
>Translated_236_residues MSEEPNQADQPQPPSANYGYQPYDQQQTYPSYNSQPSYSVPATTDNNTNAPNRWRRWVGYNALAFGLSCVIMPLGCCVMS VVANVLRSGLQELVDNPNFNLAGAIGVFVLLSFPLFLTIGVASMIQRAALYHQMPTKLWVFGSALSGIAAMFVAIMLMGM IAALFNLDFTPNAYILSIVGIFAGTSTGIGFFQWWQIRRVVINAWHWPLISGATWTGLGTLILGVGMSYLYNRLGI >Mature_235_residues SEEPNQADQPQPPSANYGYQPYDQQQTYPSYNSQPSYSVPATTDNNTNAPNRWRRWVGYNALAFGLSCVIMPLGCCVMSV VANVLRSGLQELVDNPNFNLAGAIGVFVLLSFPLFLTIGVASMIQRAALYHQMPTKLWVFGSALSGIAAMFVAIMLMGMI AALFNLDFTPNAYILSIVGIFAGTSTGIGFFQWWQIRRVVINAWHWPLISGATWTGLGTLILGVGMSYLYNRLGI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25920; Mature: 25789
Theoretical pI: Translated: 8.03; Mature: 8.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEEPNQADQPQPPSANYGYQPYDQQQTYPSYNSQPSYSVPATTDNNTNAPNRWRRWVGY CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCH NALAFGLSCVIMPLGCCVMSVVANVLRSGLQELVDNPNFNLAGAIGVFVLLSFPLFLTIG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH VASMIQRAALYHQMPTKLWVFGSALSGIAAMFVAIMLMGMIAALFNLDFTPNAYILSIVG HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH IFAGTSTGIGFFQWWQIRRVVINAWHWPLISGATWTGLGTLILGVGMSYLYNRLGI HHHCCCCCCHHHHHHHHHHHHHHHHCCHHCCCCCHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SEEPNQADQPQPPSANYGYQPYDQQQTYPSYNSQPSYSVPATTDNNTNAPNRWRRWVGY CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCH NALAFGLSCVIMPLGCCVMSVVANVLRSGLQELVDNPNFNLAGAIGVFVLLSFPLFLTIG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH VASMIQRAALYHQMPTKLWVFGSALSGIAAMFVAIMLMGMIAALFNLDFTPNAYILSIVG HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH IFAGTSTGIGFFQWWQIRRVVINAWHWPLISGATWTGLGTLILGVGMSYLYNRLGI HHHCCCCCCHHHHHHHHHHHHHHHHCCHHCCCCCHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA