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The map label for this gene is asnC [C]

Identifier: 159899251

GI number: 159899251

Start: 3489782

End: 3490255

Strand: Direct

Name: asnC [C]

Synonym: Haur_2732

Alternate gene names: 159899251

Gene position: 3489782-3490255 (Clockwise)

Preceding gene: 159899248

Following gene: 159899252

Centisome position: 54.99

GC content: 52.53

Gene sequence:

>474_bases
ATGACAATGGACGAGCTTGATCAGGCCATTTTAGAAGTTCTGCAAACCGATGCCCGCCTGCCCAATCGGGCGATTGCCAG
TAAAGTTGGCAGCAGCGAGCCAACCGTGCGCCGCCGGATCGAACGATTGGTTGACGAAGGGTTAATCAAAATTGTCGCAG
TCGCCTCGCCCTATGCCCTGGGCTATCAGGTGGTCGCCATCATCGGCATGCAAATCGATCGAGCCTACCAGCGCCAAATT
GAACAAGCCTTATGTAATTTGCCCCATGTGCATTTTGTTGGCCTCACCTTGGGCAGCTACGATGTTGTGTTGGAAGCATG
GCTACGCTCCACCGATGAATTATTAGAGCTGTTGGCCGACCATATCGCGCCCTTGCCAGGAGTCCAGCGGGTCGAGCCAT
GGCAAGTATTGAAGCTCAGCAAATACAATTACGATTGGGGCAATCAACCTTCGATCAGCAATTCTCACCATTGA

Upstream 100 bases:

>100_bases
AATGATCCTAACAAATTTGGGAACAAAATGCTGACGAAAAACGTCATTGTGCCAAACCCCGAAGAGTGTGTTTCGTCAGT
CCACATTGGAGGAATACGTT

Downstream 100 bases:

>100_bases
CGCAGGCTTAACTGGCGCGTACAATGGCCTAATACTGAATCACTAGCAATCGGGAGAAAGGAATATGCCAGGTCAACGCT
GGCGGCTCTTGCCGTCTCTG

Product: AsnC family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 157; Mature: 156

Protein sequence:

>157_residues
MTMDELDQAILEVLQTDARLPNRAIASKVGSSEPTVRRRIERLVDEGLIKIVAVASPYALGYQVVAIIGMQIDRAYQRQI
EQALCNLPHVHFVGLTLGSYDVVLEAWLRSTDELLELLADHIAPLPGVQRVEPWQVLKLSKYNYDWGNQPSISNSHH

Sequences:

>Translated_157_residues
MTMDELDQAILEVLQTDARLPNRAIASKVGSSEPTVRRRIERLVDEGLIKIVAVASPYALGYQVVAIIGMQIDRAYQRQI
EQALCNLPHVHFVGLTLGSYDVVLEAWLRSTDELLELLADHIAPLPGVQRVEPWQVLKLSKYNYDWGNQPSISNSHH
>Mature_156_residues
TMDELDQAILEVLQTDARLPNRAIASKVGSSEPTVRRRIERLVDEGLIKIVAVASPYALGYQVVAIIGMQIDRAYQRQIE
QALCNLPHVHFVGLTLGSYDVVLEAWLRSTDELLELLADHIAPLPGVQRVEPWQVLKLSKYNYDWGNQPSISNSHH

Specific function: Activator Of Asna Transcription; Autogenous Regulator Of Its Own Transcription; And Repressor Of The Expression Of Gida At A Post-Transcriptional Level. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH asnC-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011008
- InterPro:   IPR000485
- InterPro:   IPR013249
- InterPro:   IPR019888
- InterPro:   IPR019887
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01037 AsnC_trans_reg; PF08281 Sigma70_r4_2 [H]

EC number: NA

Molecular weight: Translated: 17668; Mature: 17536

Theoretical pI: Translated: 5.57; Mature: 5.57

Prosite motif: PS00519 HTH_ASNC_1 ; PS50956 HTH_ASNC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTMDELDQAILEVLQTDARLPNRAIASKVGSSEPTVRRRIERLVDEGLIKIVAVASPYAL
CCHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHH
GYQVVAIIGMQIDRAYQRQIEQALCNLPHVHFVGLTLGSYDVVLEAWLRSTDELLELLAD
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHEECCHHHHHHHHHHCCHHHHHHHHHH
HIAPLPGVQRVEPWQVLKLSKYNYDWGNQPSISNSHH
HCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TMDELDQAILEVLQTDARLPNRAIASKVGSSEPTVRRRIERLVDEGLIKIVAVASPYAL
CHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHH
GYQVVAIIGMQIDRAYQRQIEQALCNLPHVHFVGLTLGSYDVVLEAWLRSTDELLELLAD
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHEECCHHHHHHHHHHCCHHHHHHHHHH
HIAPLPGVQRVEPWQVLKLSKYNYDWGNQPSISNSHH
HCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12622808 [H]