The gene/protein map for NC_009972 is currently unavailable.
Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is srtF [H]

Identifier: 159899236

GI number: 159899236

Start: 3472797

End: 3473507

Strand: Direct

Name: srtF [H]

Synonym: Haur_2717

Alternate gene names: 159899236

Gene position: 3472797-3473507 (Clockwise)

Preceding gene: 159899231

Following gene: 159899237

Centisome position: 54.72

GC content: 55.13

Gene sequence:

>711_bases
ATGCCAAATAGCCAGTTCGCAAGCATCAAACGGCCAAGCGCCTATGATACAATAGACTCTGTGATGAATCGAACAGATGT
GGCGCTACAACTGAGCTGGCACGAGCTTGCCAAAACCTACAGCACCCGCCCGGTCTACGACCAGTTGGCGGGCGAATTGC
ATAGTGGTGAAGTTTTGGCAGTGCGCGGCCCAAATGGCGCTGGCAAATCGACCTTTTTGCGCTTGCTCTGCGGACTCGAA
CGGCCAAGCGCTGGCACAATTCGCTATCAGTGGCAAGGCCAAACCTACAGCCCCAACACGATGCGCCCCTGGATCGGCTT
TGTTGGGCCAGATGTCGCTTTGTATCGTGAATTAAGCGCGATCGAACATTTGCAATTTTTGGCCAAAGCCCGTGGTTTAG
CCGCCGATCAAGTTTATTGGCGCGAATTGTTGGCCCAGGTTGGGTTGGCTGGTCGTGAAGCAGAACGGGTCGCCCATTTT
TCATCGGGCATGGCCTTGCGTTTGAAATATGCAATTGCGCTTTTAGCCAAGCCACCAGTGCTGCTGCTCGATGAGCCAAC
CGCCATGTTCGATGAGCCAGGTCGCCAATTTGTGGCTCAGCTGGTTGAACAACAGCGCCAGCATGGTCTGACCATCTTGG
CCACCAACGATCAGCGCGATGCTGCTTGGGCAGATCTCGTTTTGACGGTAGGAGCGGCGGCGCGTGGCTAA

Upstream 100 bases:

>100_bases
CTTAGTATTCCTCAACCAAGCCTAATCCTGCTATAGGACAAATAGCCCATTAACCGAAATATCTAGTAATATAGATATTA
AAGATCATTAAAAGATCCTA

Downstream 100 bases:

>100_bases
ACCAACATTATGGCAAGCTGCTTGGGCAGTCGCCTACAAAGATTTACAAATCGAGCTGCGCACACGTTATGCCTTGAATG
CCATGGCCTTGTTTGCAGTC

Product: ABC transporter-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 236; Mature: 235

Protein sequence:

>236_residues
MPNSQFASIKRPSAYDTIDSVMNRTDVALQLSWHELAKTYSTRPVYDQLAGELHSGEVLAVRGPNGAGKSTFLRLLCGLE
RPSAGTIRYQWQGQTYSPNTMRPWIGFVGPDVALYRELSAIEHLQFLAKARGLAADQVYWRELLAQVGLAGREAERVAHF
SSGMALRLKYAIALLAKPPVLLLDEPTAMFDEPGRQFVAQLVEQQRQHGLTILATNDQRDAAWADLVLTVGAAARG

Sequences:

>Translated_236_residues
MPNSQFASIKRPSAYDTIDSVMNRTDVALQLSWHELAKTYSTRPVYDQLAGELHSGEVLAVRGPNGAGKSTFLRLLCGLE
RPSAGTIRYQWQGQTYSPNTMRPWIGFVGPDVALYRELSAIEHLQFLAKARGLAADQVYWRELLAQVGLAGREAERVAHF
SSGMALRLKYAIALLAKPPVLLLDEPTAMFDEPGRQFVAQLVEQQRQHGLTILATNDQRDAAWADLVLTVGAAARG
>Mature_235_residues
PNSQFASIKRPSAYDTIDSVMNRTDVALQLSWHELAKTYSTRPVYDQLAGELHSGEVLAVRGPNGAGKSTFLRLLCGLER
PSAGTIRYQWQGQTYSPNTMRPWIGFVGPDVALYRELSAIEHLQFLAKARGLAADQVYWRELLAQVGLAGREAERVAHFS
SGMALRLKYAIALLAKPPVLLLDEPTAMFDEPGRQFVAQLVEQQRQHGLTILATNDQRDAAWADLVLTVGAAARG

Specific function: Implicated in the export process of the lantibiotic SrtA (Potential) [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transporter domain [H]

Homologues:

Organism=Homo sapiens, GI150417984, Length=183, Percent_Identity=32.7868852459016, Blast_Score=87, Evalue=9e-18,
Organism=Homo sapiens, GI105990541, Length=182, Percent_Identity=30.7692307692308, Blast_Score=86, Evalue=4e-17,
Organism=Homo sapiens, GI21536376, Length=202, Percent_Identity=29.7029702970297, Blast_Score=85, Evalue=6e-17,
Organism=Homo sapiens, GI27881501, Length=200, Percent_Identity=28, Blast_Score=81, Evalue=7e-16,
Organism=Homo sapiens, GI30795238, Length=200, Percent_Identity=28, Blast_Score=81, Evalue=7e-16,
Organism=Homo sapiens, GI116734710, Length=174, Percent_Identity=31.6091954022989, Blast_Score=81, Evalue=1e-15,
Organism=Homo sapiens, GI27436953, Length=180, Percent_Identity=27.7777777777778, Blast_Score=77, Evalue=1e-14,
Organism=Homo sapiens, GI153792144, Length=174, Percent_Identity=28.735632183908, Blast_Score=76, Evalue=3e-14,
Organism=Homo sapiens, GI27262624, Length=179, Percent_Identity=29.0502793296089, Blast_Score=75, Evalue=7e-14,
Organism=Homo sapiens, GI27262626, Length=179, Percent_Identity=29.0502793296089, Blast_Score=75, Evalue=7e-14,
Organism=Homo sapiens, GI45446740, Length=202, Percent_Identity=26.2376237623762, Blast_Score=74, Evalue=1e-13,
Organism=Homo sapiens, GI47078218, Length=202, Percent_Identity=26.2376237623762, Blast_Score=74, Evalue=1e-13,
Organism=Homo sapiens, GI215820660, Length=182, Percent_Identity=30.2197802197802, Blast_Score=74, Evalue=1e-13,
Organism=Homo sapiens, GI20143975, Length=182, Percent_Identity=30.2197802197802, Blast_Score=74, Evalue=1e-13,
Organism=Homo sapiens, GI6005701, Length=152, Percent_Identity=29.6052631578947, Blast_Score=72, Evalue=4e-13,
Organism=Homo sapiens, GI27477115, Length=178, Percent_Identity=28.0898876404494, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI46592915, Length=185, Percent_Identity=29.7297297297297, Blast_Score=69, Evalue=3e-12,
Organism=Homo sapiens, GI46592956, Length=185, Percent_Identity=29.7297297297297, Blast_Score=69, Evalue=3e-12,
Organism=Homo sapiens, GI46592964, Length=185, Percent_Identity=29.7297297297297, Blast_Score=69, Evalue=3e-12,
Organism=Homo sapiens, GI46592978, Length=185, Percent_Identity=29.7297297297297, Blast_Score=69, Evalue=3e-12,
Organism=Homo sapiens, GI46592898, Length=185, Percent_Identity=29.7297297297297, Blast_Score=69, Evalue=3e-12,
Organism=Homo sapiens, GI46592971, Length=185, Percent_Identity=29.7297297297297, Blast_Score=69, Evalue=4e-12,
Organism=Homo sapiens, GI9961252, Length=213, Percent_Identity=25.3521126760563, Blast_Score=68, Evalue=7e-12,
Organism=Homo sapiens, GI4505771, Length=213, Percent_Identity=25.3521126760563, Blast_Score=68, Evalue=8e-12,
Organism=Homo sapiens, GI9961250, Length=220, Percent_Identity=24.0909090909091, Blast_Score=65, Evalue=4e-11,
Organism=Homo sapiens, GI31657092, Length=167, Percent_Identity=29.3413173652695, Blast_Score=65, Evalue=6e-11,
Organism=Escherichia coli, GI87081709, Length=205, Percent_Identity=33.1707317073171, Blast_Score=87, Evalue=1e-18,
Organism=Escherichia coli, GI1788225, Length=173, Percent_Identity=32.3699421965318, Blast_Score=84, Evalue=9e-18,
Organism=Escherichia coli, GI87081782, Length=183, Percent_Identity=30.6010928961749, Blast_Score=82, Evalue=3e-17,
Organism=Escherichia coli, GI87081791, Length=195, Percent_Identity=29.7435897435897, Blast_Score=81, Evalue=5e-17,
Organism=Escherichia coli, GI1789873, Length=195, Percent_Identity=30.7692307692308, Blast_Score=81, Evalue=6e-17,
Organism=Escherichia coli, GI1787029, Length=194, Percent_Identity=28.3505154639175, Blast_Score=80, Evalue=2e-16,
Organism=Escherichia coli, GI1787370, Length=190, Percent_Identity=31.0526315789474, Blast_Score=78, Evalue=6e-16,
Organism=Escherichia coli, GI1789991, Length=193, Percent_Identity=26.9430051813472, Blast_Score=78, Evalue=7e-16,
Organism=Escherichia coli, GI1789593, Length=191, Percent_Identity=30.3664921465969, Blast_Score=77, Evalue=9e-16,
Organism=Escherichia coli, GI1788761, Length=197, Percent_Identity=29.9492385786802, Blast_Score=76, Evalue=2e-15,
Organism=Escherichia coli, GI1787712, Length=198, Percent_Identity=29.2929292929293, Blast_Score=75, Evalue=3e-15,
Organism=Escherichia coli, GI1787105, Length=187, Percent_Identity=31.5508021390374, Blast_Score=75, Evalue=5e-15,
Organism=Escherichia coli, GI1786563, Length=220, Percent_Identity=30.4545454545455, Blast_Score=73, Evalue=1e-14,
Organism=Escherichia coli, GI1786703, Length=182, Percent_Identity=32.967032967033, Blast_Score=73, Evalue=2e-14,
Organism=Escherichia coli, GI1786698, Length=190, Percent_Identity=25.7894736842105, Blast_Score=71, Evalue=5e-14,
Organism=Escherichia coli, GI1790467, Length=213, Percent_Identity=29.5774647887324, Blast_Score=70, Evalue=9e-14,
Organism=Escherichia coli, GI1790525, Length=176, Percent_Identity=27.8409090909091, Blast_Score=70, Evalue=9e-14,
Organism=Escherichia coli, GI87082064, Length=191, Percent_Identity=34.0314136125654, Blast_Score=69, Evalue=3e-13,
Organism=Escherichia coli, GI1787164, Length=203, Percent_Identity=33.9901477832512, Blast_Score=68, Evalue=6e-13,
Organism=Escherichia coli, GI1786398, Length=175, Percent_Identity=30.2857142857143, Blast_Score=67, Evalue=8e-13,
Organism=Escherichia coli, GI1790544, Length=214, Percent_Identity=28.0373831775701, Blast_Score=67, Evalue=1e-12,
Organism=Escherichia coli, GI87082267, Length=198, Percent_Identity=32.3232323232323, Blast_Score=67, Evalue=1e-12,
Organism=Escherichia coli, GI1787089, Length=162, Percent_Identity=32.7160493827161, Blast_Score=67, Evalue=1e-12,
Organism=Escherichia coli, GI1786253, Length=172, Percent_Identity=30.2325581395349, Blast_Score=66, Evalue=2e-12,
Organism=Escherichia coli, GI87082268, Length=200, Percent_Identity=27, Blast_Score=66, Evalue=2e-12,
Organism=Escherichia coli, GI1789864, Length=206, Percent_Identity=27.1844660194175, Blast_Score=66, Evalue=2e-12,
Organism=Escherichia coli, GI48994943, Length=200, Percent_Identity=28, Blast_Score=66, Evalue=2e-12,
Organism=Escherichia coli, GI1787758, Length=200, Percent_Identity=30, Blast_Score=65, Evalue=3e-12,
Organism=Escherichia coli, GI48995001, Length=189, Percent_Identity=31.7460317460317, Blast_Score=65, Evalue=6e-12,
Organism=Escherichia coli, GI1786872, Length=163, Percent_Identity=30.0613496932515, Blast_Score=64, Evalue=1e-11,
Organism=Escherichia coli, GI87081834, Length=168, Percent_Identity=29.7619047619048, Blast_Score=64, Evalue=1e-11,
Organism=Escherichia coli, GI1786319, Length=168, Percent_Identity=29.7619047619048, Blast_Score=62, Evalue=4e-11,
Organism=Escherichia coli, GI1788165, Length=178, Percent_Identity=29.2134831460674, Blast_Score=61, Evalue=7e-11,
Organism=Caenorhabditis elegans, GI115533608, Length=223, Percent_Identity=27.8026905829596, Blast_Score=88, Evalue=4e-18,
Organism=Caenorhabditis elegans, GI71983510, Length=205, Percent_Identity=33.6585365853659, Blast_Score=84, Evalue=6e-17,
Organism=Caenorhabditis elegans, GI71983516, Length=205, Percent_Identity=33.6585365853659, Blast_Score=84, Evalue=6e-17,
Organism=Caenorhabditis elegans, GI71983523, Length=205, Percent_Identity=33.6585365853659, Blast_Score=84, Evalue=7e-17,
Organism=Caenorhabditis elegans, GI17565586, Length=213, Percent_Identity=26.7605633802817, Blast_Score=75, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI71992285, Length=218, Percent_Identity=26.1467889908257, Blast_Score=66, Evalue=2e-11,
Organism=Saccharomyces cerevisiae, GI6320874, Length=195, Percent_Identity=27.1794871794872, Blast_Score=64, Evalue=3e-11,
Organism=Drosophila melanogaster, GI24648314, Length=185, Percent_Identity=27.5675675675676, Blast_Score=86, Evalue=2e-17,
Organism=Drosophila melanogaster, GI24666092, Length=187, Percent_Identity=27.2727272727273, Blast_Score=79, Evalue=3e-15,
Organism=Drosophila melanogaster, GI116007184, Length=220, Percent_Identity=27.7272727272727, Blast_Score=77, Evalue=7e-15,
Organism=Drosophila melanogaster, GI221500365, Length=220, Percent_Identity=27.7272727272727, Blast_Score=77, Evalue=9e-15,
Organism=Drosophila melanogaster, GI221512771, Length=201, Percent_Identity=26.865671641791, Blast_Score=77, Evalue=1e-14,
Organism=Drosophila melanogaster, GI19920532, Length=190, Percent_Identity=29.4736842105263, Blast_Score=77, Evalue=1e-14,
Organism=Drosophila melanogaster, GI24580930, Length=190, Percent_Identity=29.4736842105263, Blast_Score=77, Evalue=1e-14,
Organism=Drosophila melanogaster, GI28574744, Length=185, Percent_Identity=31.3513513513514, Blast_Score=77, Evalue=1e-14,
Organism=Drosophila melanogaster, GI24643674, Length=217, Percent_Identity=27.1889400921659, Blast_Score=75, Evalue=5e-14,
Organism=Drosophila melanogaster, GI28574150, Length=198, Percent_Identity=26.2626262626263, Blast_Score=72, Evalue=2e-13,
Organism=Drosophila melanogaster, GI116007328, Length=198, Percent_Identity=26.2626262626263, Blast_Score=72, Evalue=2e-13,
Organism=Drosophila melanogaster, GI28573573, Length=184, Percent_Identity=26.6304347826087, Blast_Score=69, Evalue=3e-12,
Organism=Drosophila melanogaster, GI28573571, Length=184, Percent_Identity=26.6304347826087, Blast_Score=69, Evalue=3e-12,
Organism=Drosophila melanogaster, GI85724864, Length=208, Percent_Identity=25.9615384615385, Blast_Score=67, Evalue=1e-11,
Organism=Drosophila melanogaster, GI24580555, Length=208, Percent_Identity=25.9615384615385, Blast_Score=67, Evalue=1e-11,
Organism=Drosophila melanogaster, GI85816269, Length=208, Percent_Identity=25.9615384615385, Blast_Score=66, Evalue=2e-11,
Organism=Drosophila melanogaster, GI24580553, Length=208, Percent_Identity=25.9615384615385, Blast_Score=66, Evalue=2e-11,
Organism=Drosophila melanogaster, GI17136592, Length=207, Percent_Identity=28.5024154589372, Blast_Score=65, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR022501
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: 3.6.3.30 [C]

Molecular weight: Translated: 26033; Mature: 25902

Theoretical pI: Translated: 8.43; Mature: 8.43

Prosite motif: PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure: 

>Translated Secondary Structure
MPNSQFASIKRPSAYDTIDSVMNRTDVALQLSWHELAKTYSTRPVYDQLAGELHSGEVLA
CCCCCCCCCCCCCHHHHHHHHHCCCCEEEEEEHHHHHHHHCCCCHHHHHHCCCCCCCEEE
VRGPNGAGKSTFLRLLCGLERPSAGTIRYQWQGQTYSPNTMRPWIGFVGPDVALYRELSA
EECCCCCCHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCHHHHCCCHHHHHHHHHH
IEHLQFLAKARGLAADQVYWRELLAQVGLAGREAERVAHFSSGMALRLKYAIALLAKPPV
HHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHCCCCE
LLLDEPTAMFDEPGRQFVAQLVEQQRQHGLTILATNDQRDAAWADLVLTVGAAARG
EEEECCHHHHCCCHHHHHHHHHHHHHHCCEEEEEECCCCHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
PNSQFASIKRPSAYDTIDSVMNRTDVALQLSWHELAKTYSTRPVYDQLAGELHSGEVLA
CCCCCCCCCCCCHHHHHHHHHCCCCEEEEEEHHHHHHHHCCCCHHHHHHCCCCCCCEEE
VRGPNGAGKSTFLRLLCGLERPSAGTIRYQWQGQTYSPNTMRPWIGFVGPDVALYRELSA
EECCCCCCHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCHHHHCCCHHHHHHHHHH
IEHLQFLAKARGLAADQVYWRELLAQVGLAGREAERVAHFSSGMALRLKYAIALLAKPPV
HHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHCCCCE
LLLDEPTAMFDEPGRQFVAQLVEQQRQHGLTILATNDQRDAAWADLVLTVGAAARG
EEEECCHHHHCCCHHHHHHHHHHHHHHCCEEEEEECCCCHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11296296 [H]