Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
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Accession | NC_009972 |
Length | 6,346,587 |
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The map label for this gene is punA [H]
Identifier: 159899229
GI number: 159899229
Start: 3464000
End: 3464845
Strand: Direct
Name: punA [H]
Synonym: Haur_2710
Alternate gene names: 159899229
Gene position: 3464000-3464845 (Clockwise)
Preceding gene: 159899228
Following gene: 159899230
Centisome position: 54.58
GC content: 55.32
Gene sequence:
>846_bases ATGACCACCAACCGAACTCAAGCAATCACTGGCGCAGTCGCTGCCATTCGTCAATATACCGAGCGCGTACCCCAAGTTGG CATTATCCTTGGCTCTGGCTTGAGTCAACTTGTTGATCATATTCAGGATGCCGTGGTAGTTCCCTACACTGCGATTCCAG GCTTCGCACCTTCAGCGGTGCCAGGCCATCGCGGTGAACTTGTTTTAGGTGAACTTGGTGGGGTTTCTGTGCTGGCAATG CGTGGCCGCTTTCACTTCTACGAAGGCTATGCCATGGACGAAGTAACCTTGCCTGTGCATGTGATGCGAGCGCTGGGAGC CGAGATATTAATTGTTACGAATGCGGCTGGTGGCTTAAATGCCAATTGGCAGGTCGGCGACTTAATGCGCATCAGCGACC ATATTTTTATGCCAGGCATGGCGGGCTTTCACCCATTGCGCGGCCACAACGACGATACGCTTGGCCCACGCTTCCCAGCC ATGCTCAACGCCTATGATTCTGAATTAGGTGCAATGGCCAAGGCTGCCGCTGAACGGGCTGGCGCAACTCTGCGCGAAGG GGTTTATGCCATGCTAGCCGGGCCATCGTTTGAAACTGGCGCTGAGATGAACTATCTGCGCGGGGTTGGGGTTGACGCTG TGGGCATGTCTACCGCCCCTGAAACGATTGTGGCTCGCTACCGTGGTATGCGCGTCTTGGGCATTTCGTTGATCACCAAT ATTGCCCACCCCGACGCGCCACCAGCCAACCATGAAGAGGTGCTTGAGGCAGGCGAAACTGCCAAGCCCATGTTCAGCGC ATTAATCACCGATGTGCTAAGCCAAATCGCTGCCGATGGCAAGTAG
Upstream 100 bases:
>100_bases TACTGATGCTGATTTTGAGGCCAAAAAACGCGAAATTTTAAGTCGGATATAATGCCTGCGGCCATAGCAATGTGGCTATT GTTGCAAAGGATTTCAATTC
Downstream 100 bases:
>100_bases TTTGCGTGGCGTAGGCTTATTGCTGATAGGAATTGTAATTGGCATGATCATTGGGGTGTGGTGGTTAGCGCCACGCCTCA ATGGAACGATTATTCGCTTT
Product: inosine guanosine and xanthosine phosphorylase family protein
Products: NA
Alternate protein names: Inosine phosphorylase; Purine nucleoside phosphorylase I; PNP I; PU-NPase I [H]
Number of amino acids: Translated: 281; Mature: 280
Protein sequence:
>281_residues MTTNRTQAITGAVAAIRQYTERVPQVGIILGSGLSQLVDHIQDAVVVPYTAIPGFAPSAVPGHRGELVLGELGGVSVLAM RGRFHFYEGYAMDEVTLPVHVMRALGAEILIVTNAAGGLNANWQVGDLMRISDHIFMPGMAGFHPLRGHNDDTLGPRFPA MLNAYDSELGAMAKAAAERAGATLREGVYAMLAGPSFETGAEMNYLRGVGVDAVGMSTAPETIVARYRGMRVLGISLITN IAHPDAPPANHEEVLEAGETAKPMFSALITDVLSQIAADGK
Sequences:
>Translated_281_residues MTTNRTQAITGAVAAIRQYTERVPQVGIILGSGLSQLVDHIQDAVVVPYTAIPGFAPSAVPGHRGELVLGELGGVSVLAM RGRFHFYEGYAMDEVTLPVHVMRALGAEILIVTNAAGGLNANWQVGDLMRISDHIFMPGMAGFHPLRGHNDDTLGPRFPA MLNAYDSELGAMAKAAAERAGATLREGVYAMLAGPSFETGAEMNYLRGVGVDAVGMSTAPETIVARYRGMRVLGISLITN IAHPDAPPANHEEVLEAGETAKPMFSALITDVLSQIAADGK >Mature_280_residues TTNRTQAITGAVAAIRQYTERVPQVGIILGSGLSQLVDHIQDAVVVPYTAIPGFAPSAVPGHRGELVLGELGGVSVLAMR GRFHFYEGYAMDEVTLPVHVMRALGAEILIVTNAAGGLNANWQVGDLMRISDHIFMPGMAGFHPLRGHNDDTLGPRFPAM LNAYDSELGAMAKAAAERAGATLREGVYAMLAGPSFETGAEMNYLRGVGVDAVGMSTAPETIVARYRGMRVLGISLITNI AHPDAPPANHEEVLEAGETAKPMFSALITDVLSQIAADGK
Specific function: Cleavage of guanosine or inosine to respective bases and sugar-1-phosphate molecules [H]
COG id: COG0005
COG function: function code F; Purine nucleoside phosphorylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the PNP/MTAP phosphorylase family [H]
Homologues:
Organism=Homo sapiens, GI157168362, Length=263, Percent_Identity=49.8098859315589, Blast_Score=250, Evalue=1e-66, Organism=Escherichia coli, GI1788746, Length=269, Percent_Identity=43.1226765799257, Blast_Score=202, Evalue=2e-53, Organism=Caenorhabditis elegans, GI17541190, Length=271, Percent_Identity=47.9704797047971, Blast_Score=239, Evalue=8e-64, Organism=Saccharomyces cerevisiae, GI6323238, Length=304, Percent_Identity=43.75, Blast_Score=214, Evalue=9e-57, Organism=Drosophila melanogaster, GI24656093, Length=260, Percent_Identity=45.7692307692308, Blast_Score=230, Evalue=7e-61, Organism=Drosophila melanogaster, GI24656090, Length=260, Percent_Identity=45.7692307692308, Blast_Score=230, Evalue=7e-61, Organism=Drosophila melanogaster, GI45552885, Length=260, Percent_Identity=45.7692307692308, Blast_Score=230, Evalue=7e-61, Organism=Drosophila melanogaster, GI45552887, Length=260, Percent_Identity=45.7692307692308, Blast_Score=230, Evalue=7e-61, Organism=Drosophila melanogaster, GI24762376, Length=221, Percent_Identity=37.10407239819, Blast_Score=137, Evalue=6e-33,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011268 - InterPro: IPR000845 - InterPro: IPR011270 - InterPro: IPR001369 - InterPro: IPR018099 [H]
Pfam domain/function: PF01048 PNP_UDP_1 [H]
EC number: =2.4.2.1 [H]
Molecular weight: Translated: 29645; Mature: 29514
Theoretical pI: Translated: 5.53; Mature: 5.53
Prosite motif: PS01240 PNP_MTAP_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.0 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.6 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTNRTQAITGAVAAIRQYTERVPQVGIILGSGLSQLVDHIQDAVVVPYTAIPGFAPSAV CCCCHHHHHHHHHHHHHHHHHHCCEEEEEECCCHHHHHHHHHCCEEECCCCCCCCCCCCC PGHRGELVLGELGGVSVLAMRGRFHFYEGYAMDEVTLPVHVMRALGAEILIVTNAAGGLN CCCCCCEEEECCCCEEEEEECCCEEEECCCCCCCCHHHHHHHHHCCCEEEEEEECCCCCC ANWQVGDLMRISDHIFMPGMAGFHPLRGHNDDTLGPRFPAMLNAYDSELGAMAKAAAERA CCCCCCHHHHHHCCEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH GATLREGVYAMLAGPSFETGAEMNYLRGVGVDAVGMSTAPETIVARYRGMRVLGISLITN CCHHHHCEEEEEECCCCCCCCCHHHHHCCCCCCCCCCCCHHHHHHHHCCCCEEHHHHHHH IAHPDAPPANHEEVLEAGETAKPMFSALITDVLSQIAADGK HCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure TTNRTQAITGAVAAIRQYTERVPQVGIILGSGLSQLVDHIQDAVVVPYTAIPGFAPSAV CCCHHHHHHHHHHHHHHHHHHCCEEEEEECCCHHHHHHHHHCCEEECCCCCCCCCCCCC PGHRGELVLGELGGVSVLAMRGRFHFYEGYAMDEVTLPVHVMRALGAEILIVTNAAGGLN CCCCCCEEEECCCCEEEEEECCCEEEECCCCCCCCHHHHHHHHHCCCEEEEEEECCCCCC ANWQVGDLMRISDHIFMPGMAGFHPLRGHNDDTLGPRFPAMLNAYDSELGAMAKAAAERA CCCCCCHHHHHHCCEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH GATLREGVYAMLAGPSFETGAEMNYLRGVGVDAVGMSTAPETIVARYRGMRVLGISLITN CCHHHHCEEEEEECCCCCCCCCHHHHHCCCCCCCCCCCCHHHHHHHHCCCCEEHHHHHHH IAHPDAPPANHEEVLEAGETAKPMFSALITDVLSQIAADGK HCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10537218; 8969508; 9384377; 1629150 [H]