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The map label for this gene is 159899230

Identifier: 159899230

GI number: 159899230

Start: 3464835

End: 3465497

Strand: Direct

Name: 159899230

Synonym: Haur_2711

Alternate gene names: NA

Gene position: 3464835-3465497 (Clockwise)

Preceding gene: 159899229

Following gene: 159899231

Centisome position: 54.59

GC content: 52.79

Gene sequence:

>663_bases
ATGGCAAGTAGTTTGCGTGGCGTAGGCTTATTGCTGATAGGAATTGTAATTGGCATGATCATTGGGGTGTGGTGGTTAGC
GCCACGCCTCAATGGAACGATTATTCGCTTTGAGAGCGCTACCAATCCAATTGCTAGCCCTAGCGTACCGACGATCACGC
CCAATCAAGCACCAATGCCAAGCGCCACCAGCCCAGCCAGCCCAAGCAACTCGGCTAGTCCAACTCCATCAGCGACCATC
CAAGCAACTGCTAGTTTGACCAGTTCCGGTGATCTTAAGCTTGATCTGTTAGCGGCGGTTAATCGCGAACGCCAACAAAC
CAATTGTGAAGCCTTGGTTTTCGATTCGCGGCTGCAAAGCATCGCCCAAGCCCATGCCGATGATATGGCTCAGCATGAAA
AAATTGATCACGTTGGCAGCGATGGTCGCAGCTACAGTCAGCGGCTTGAGGCGGTTGGCTATCAATTTATTCGGCGCGGC
GAAAATATCTCAGCCTGGTTCGCCACTCCAATCAAGGTTGTGGCTCAATGGATGGACGAGCCAGTTGATGGGCCACATCG
CGCCAACATCACCAATTGTGCTTATCGCCATGTGGGCATTGGCCTAGCCTACGTTGGCGACCACCCGTATTGGGTGCTTG
ACATGGCCGAACCAAAACCCTAA

Upstream 100 bases:

>100_bases
GCGCCACCAGCCAACCATGAAGAGGTGCTTGAGGCAGGCGAAACTGCCAAGCCCATGTTCAGCGCATTAATCACCGATGT
GCTAAGCCAAATCGCTGCCG

Downstream 100 bases:

>100_bases
GATGCAGTTATGTTAAGCGTCATTGAGCATATCATTCAGCCAATGCTGTGGGCAATTGGCACCTATGCAGTGTTGCGCCT
GTTAATCCGGCTTGGTCGGC

Product: SCP-like extracellular protein

Products: NA

Alternate protein names: Transmembrane Protein; Allergen V5/Tpx-1 Family Protein; RNA Polymerase ECF-Subfamily Sigma Factor; Allergen V5/Tpx-1 ; SCP-Like Extracellular Protein; Lipoprotein; Membrane-Anchored Protein; Signal Peptide; LOW QUALITY PROTEIN Allergen V5/Tpx-1 Family Protein; Scp-Like Extracellular; Domains

Number of amino acids: Translated: 220; Mature: 219

Protein sequence:

>220_residues
MASSLRGVGLLLIGIVIGMIIGVWWLAPRLNGTIIRFESATNPIASPSVPTITPNQAPMPSATSPASPSNSASPTPSATI
QATASLTSSGDLKLDLLAAVNRERQQTNCEALVFDSRLQSIAQAHADDMAQHEKIDHVGSDGRSYSQRLEAVGYQFIRRG
ENISAWFATPIKVVAQWMDEPVDGPHRANITNCAYRHVGIGLAYVGDHPYWVLDMAEPKP

Sequences:

>Translated_220_residues
MASSLRGVGLLLIGIVIGMIIGVWWLAPRLNGTIIRFESATNPIASPSVPTITPNQAPMPSATSPASPSNSASPTPSATI
QATASLTSSGDLKLDLLAAVNRERQQTNCEALVFDSRLQSIAQAHADDMAQHEKIDHVGSDGRSYSQRLEAVGYQFIRRG
ENISAWFATPIKVVAQWMDEPVDGPHRANITNCAYRHVGIGLAYVGDHPYWVLDMAEPKP
>Mature_219_residues
ASSLRGVGLLLIGIVIGMIIGVWWLAPRLNGTIIRFESATNPIASPSVPTITPNQAPMPSATSPASPSNSASPTPSATIQ
ATASLTSSGDLKLDLLAAVNRERQQTNCEALVFDSRLQSIAQAHADDMAQHEKIDHVGSDGRSYSQRLEAVGYQFIRRGE
NISAWFATPIKVVAQWMDEPVDGPHRANITNCAYRHVGIGLAYVGDHPYWVLDMAEPKP

Specific function: Unknown

COG id: COG2340

COG function: function code S; Uncharacterized protein with SCP/PR1 domains

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23683; Mature: 23552

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASSLRGVGLLLIGIVIGMIIGVWWLAPRLNGTIIRFESATNPIASPSVPTITPNQAPMP
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCC
SATSPASPSNSASPTPSATIQATASLTSSGDLKLDLLAAVNRERQQTNCEALVFDSRLQS
CCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCEEHHHHHHHHHHHHCCCCEEEHHHHHHH
IAQAHADDMAQHEKIDHVGSDGRSYSQRLEAVGYQFIRRGENISAWFATPIKVVAQWMDE
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHCC
PVDGPHRANITNCAYRHVGIGLAYVGDHPYWVLDMAEPKP
CCCCCCCCCHHHHHHHHHCCEEEEECCCCEEEEECCCCCC
>Mature Secondary Structure 
ASSLRGVGLLLIGIVIGMIIGVWWLAPRLNGTIIRFESATNPIASPSVPTITPNQAPMP
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCC
SATSPASPSNSASPTPSATIQATASLTSSGDLKLDLLAAVNRERQQTNCEALVFDSRLQS
CCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCEEHHHHHHHHHHHHCCCCEEEHHHHHHH
IAQAHADDMAQHEKIDHVGSDGRSYSQRLEAVGYQFIRRGENISAWFATPIKVVAQWMDE
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHCC
PVDGPHRANITNCAYRHVGIGLAYVGDHPYWVLDMAEPKP
CCCCCCCCCHHHHHHHHHCCEEEEECCCCEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA