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The map label for this gene is recO

Identifier: 159899227

GI number: 159899227

Start: 3462450

End: 3463211

Strand: Direct

Name: recO

Synonym: Haur_2708

Alternate gene names: 159899227

Gene position: 3462450-3463211 (Clockwise)

Preceding gene: 159899226

Following gene: 159899228

Centisome position: 54.56

GC content: 50.79

Gene sequence:

>762_bases
ATGCGCGACCGATTATATACCACCGAAGCCCTGATTATTCGGCGCTCCGATGTTGGCGAGGCTGATCGGATTCTGACGAT
CTACACGCCGCATCATGGCAAACTCAGCGTTACGGCGCGAGGTGTGCGCAAAATGACCAGCAAATTGGCTGGCCATTTGG
AGCTGTTTATCCACACCCGCTTACAACTTGCCAAAGGCCGCTCATTCGACGTGGTGACCGAAAGTCGGGTAGTCCAGCCA
TTTCGCAGCTTGCGCGAAGATCTCTCGCGGATCAGCCAAGGCTATTACGTGGCCGAATTGCTTGATCAAATGACCCCCGA
CGAGAGCGATAATCCGGCGCTTTTTCGCCTAACATGCGAAACCCTAGCAGCCTTGGATGTGCTTGATGACGTTGTGCGGC
GTGATGTCATTTTGCGGTATTATGAATTACACACGCTGATTCTTTCAGGCTATCGGCCACATCTGTTTGATTGTGCTAAC
TGTGAACGCGAGCTTAGCCCAGATGCAGATCGATACAGCCCAATCACTGGAGGTGTTTTATGTCAACAATGTTCAAGCAA
CGAGCCACGAACATTGCCGATCAACCTCAATACCTTCAAATTGTTACGCTATCTGGCGCGAATGCCGCTGGAGACAGTTG
TCAGCCTTGTACCGGCCCCAGCGACAGTTCAGGAAGCGCGATTAGTCTTGAAAGCCTCGTTAAGCCAAATTTTAGAGCGT
GAGCTAAAATCAACCCAATTTCTCAATTTAGTGCGTGGTTGA

Upstream 100 bases:

>100_bases
AGCGGGTGGTGCAGGCCTTGCCCAGCAGCGAACGCCAACAGCTCACAGCCAACGTCAACCAATGGCTATCAATCATTAAT
CGAAGCTAGAAGGAGCCAGC

Downstream 100 bases:

>100_bases
CAAGCCTATAGCTTACCACTACACTAGCCGCGATTCCCCCTAAAGGAGCACAACCAATGAGCTATGTTGAGCAACTCTTG
GCTGAAAACGAAGATATTAA

Product: DNA repair protein RecO

Products: NA

Alternate protein names: Recombination protein O

Number of amino acids: Translated: 253; Mature: 253

Protein sequence:

>253_residues
MRDRLYTTEALIIRRSDVGEADRILTIYTPHHGKLSVTARGVRKMTSKLAGHLELFIHTRLQLAKGRSFDVVTESRVVQP
FRSLREDLSRISQGYYVAELLDQMTPDESDNPALFRLTCETLAALDVLDDVVRRDVILRYYELHTLILSGYRPHLFDCAN
CERELSPDADRYSPITGGVLCQQCSSNEPRTLPINLNTFKLLRYLARMPLETVVSLVPAPATVQEARLVLKASLSQILER
ELKSTQFLNLVRG

Sequences:

>Translated_253_residues
MRDRLYTTEALIIRRSDVGEADRILTIYTPHHGKLSVTARGVRKMTSKLAGHLELFIHTRLQLAKGRSFDVVTESRVVQP
FRSLREDLSRISQGYYVAELLDQMTPDESDNPALFRLTCETLAALDVLDDVVRRDVILRYYELHTLILSGYRPHLFDCAN
CERELSPDADRYSPITGGVLCQQCSSNEPRTLPINLNTFKLLRYLARMPLETVVSLVPAPATVQEARLVLKASLSQILER
ELKSTQFLNLVRG
>Mature_253_residues
MRDRLYTTEALIIRRSDVGEADRILTIYTPHHGKLSVTARGVRKMTSKLAGHLELFIHTRLQLAKGRSFDVVTESRVVQP
FRSLREDLSRISQGYYVAELLDQMTPDESDNPALFRLTCETLAALDVLDDVVRRDVILRYYELHTLILSGYRPHLFDCAN
CERELSPDADRYSPITGGVLCQQCSSNEPRTLPINLNTFKLLRYLARMPLETVVSLVPAPATVQEARLVLKASLSQILER
ELKSTQFLNLVRG

Specific function: Involved in DNA repair and recF pathway recombination

COG id: COG1381

COG function: function code L; Recombinational DNA repair protein (RecF pathway)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recO family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RECO_HERA2 (A9B168)

Other databases:

- EMBL:   CP000875
- RefSeq:   YP_001545474.1
- ProteinModelPortal:   A9B168
- SMR:   A9B168
- GeneID:   5734589
- GenomeReviews:   CP000875_GR
- KEGG:   hau:Haur_2708
- HOGENOM:   HBG634481
- OMA:   ARGGIVC
- ProtClustDB:   CLSK935623
- BioCyc:   HAUR316274:HAUR_2708-MONOMER
- HAMAP:   MF_00201
- InterPro:   IPR001164
- InterPro:   IPR022572
- InterPro:   IPR016027
- InterPro:   IPR003717
- TIGRFAMs:   TIGR00613

Pfam domain/function: PF02565 RecO; PF11967 RecO_N; SSF57863 ArfGAP; SSF50249 Nucleic_acid_OB

EC number: NA

Molecular weight: Translated: 28771; Mature: 28771

Theoretical pI: Translated: 8.21; Mature: 8.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRDRLYTTEALIIRRSDVGEADRILTIYTPHHGKLSVTARGVRKMTSKLAGHLELFIHTR
CCCCCEEHHEEEEECCCCCCCCCEEEEEECCCCEEEEHHHHHHHHHHHHHHHHHHHHHHH
LQLAKGRSFDVVTESRVVQPFRSLREDLSRISQGYYVAELLDQMTPDESDNPALFRLTCE
HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCEEEEEHHH
TLAALDVLDDVVRRDVILRYYELHTLILSGYRPHLFDCANCERELSPDADRYSPITGGVL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHCCCCCCCCCCHHCCCCHHHHH
CQQCSSNEPRTLPINLNTFKLLRYLARMPLETVVSLVPAPATVQEARLVLKASLSQILER
HHHHCCCCCCEEEECCCHHHHHHHHHHCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
ELKSTQFLNLVRG
HHHHHHHHHHHCC
>Mature Secondary Structure
MRDRLYTTEALIIRRSDVGEADRILTIYTPHHGKLSVTARGVRKMTSKLAGHLELFIHTR
CCCCCEEHHEEEEECCCCCCCCCEEEEEECCCCEEEEHHHHHHHHHHHHHHHHHHHHHHH
LQLAKGRSFDVVTESRVVQPFRSLREDLSRISQGYYVAELLDQMTPDESDNPALFRLTCE
HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCEEEEEHHH
TLAALDVLDDVVRRDVILRYYELHTLILSGYRPHLFDCANCERELSPDADRYSPITGGVL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHCCCCCCCCCCHHCCCCHHHHH
CQQCSSNEPRTLPINLNTFKLLRYLARMPLETVVSLVPAPATVQEARLVLKASLSQILER
HHHHCCCCCCEEEECCCHHHHHHHHHHCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
ELKSTQFLNLVRG
HHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA