Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
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Accession | NC_009972 |
Length | 6,346,587 |
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The map label for this gene is 159899226
Identifier: 159899226
GI number: 159899226
Start: 3460627
End: 3462438
Strand: Direct
Name: 159899226
Synonym: Haur_2707
Alternate gene names: NA
Gene position: 3460627-3462438 (Clockwise)
Preceding gene: 159899223
Following gene: 159899227
Centisome position: 54.53
GC content: 51.43
Gene sequence:
>1812_bases ATGATACGAACACATGCTTCAATCGAATGGCTGGCCAGTTTACCTACCAGCGAACGCCATGTGCTGGCACATTTATGGCA AGTTGCCGATGCTGCTCAGCTTGGGCAACCAAGTGCCATCCAAGCCTTGGTTGCGCGTTTATCCACGCCTGAACGCTCAG CGCTTGATCGGGTGATTGCGGCTGGTGGTAAGCTCGCGGCCAAATCGCTTGAACGTGAGTTTGGCAAAATTCGCTCACAT CGGGATATTGTGACTCCTCGGGCCTATTTATTGGCGCTGCACGGCCAAGCTTCGGTGCTTGAACGTCTCTATATTTTGGG CTTGCTTCAGCCACTCAAAACGCTGGACGGCGAGTATTACGTGATTTTTAGCGATTGGTTGCAGGCGTTGCCAGCAGTTT CGGCCCCCAGTTTGCCAACCTGGCAGCAACATCCCAGCCCAAGCAACTGGATCGAAGCAGATCTCAATCAAACCGAAACG CTGCTGACTACGATCTTGGCGCTGTGTTATCAGCAACCGCTCCAGCTGACCCGCCAACTTCAACTTGAACGCGATGGTTT GAAAGCAATCTGTCAACGCATAGCAGTTTCTACGCCAGCAAGCGAACGCCAATTTCCTCAATTAGCCTGGCTGCGAAATT TGGCGCTTGAGGCTGGCTTATTACACATCCAACATCAACAGCTTCAGCTCGCTGGCAACCCAATTAATTGGCTAGAAGCT ACGCCCAAACAGCGGTTAGAGCGCTTATTTAATGCCTGGTTGGTTTGTGATTTTGATGAGTTTAGCTTGACTGAGTTGCA GCCTCAGACTCCATTTACCCTCCAAGCTGCTCGCCAAGCCTTATGGCAAGTATTAACAACCGCGCCACCCGATCAATGGT TGGCCTTCGACGATCTACTGGCACAAATCCAAGCCTTACATCCCGAACTGTTGCGCAGCGATTTCGAGCAGCCCGTAATT CACAATCAATCCAATGATTCATTCGTTGGTTGGCAACATTGGGCCAAAGTTGAGGGCGCATGGATCAAAGCCGCCTGCCA AGGGCCATTGTTCTGGCTCGGCTTGCTTGATGTCGATCAACTTAACCATCCACAGGCTTTGCGTTTAACTCAATGGGCAA GCTGCTTACTCGATCCAGCGCACGAGCCAAGTCAATTTGCTGGGCAACTACAACTAAGCAGCGATGGCCTGATTCGGGTT CCACCAACGGTTGAGCCGCTGCCGCGCTTTCAAATCCAACGCATCACCGAATGGCAATCAACCGACAGCCATGGCACCAT GCTCGTGCGCTTGACCGCCCATTCGTATAGCCAAGCCTTGCAACGTGGCATTCAGGCCAGCCAAATGCAAACATTTTTGC AACGCTGGTGTGACCGACCAGTGCCAAACGATTTGCAAAGCTTATTTCAGCAATGGCAAAACGATCGCCAGCACTTATTG GCTCGTCCGGCTTTATTGCTGGAAGCCGATGATCCCAGATTACTCAACGAGCTGGCTAAACTGCCTAACTTACCACCCTA CGCCGAGCTTAATCCCCAACTTTGGGAATTGGAAATAGCTGATAGTGCCGCATTAACCAATCTGTTGCATACAGCAGGCT ATGCAATCAACCCAGTCAGCGAGCCAGATCAACGGATCAGTGACCATGATCTTAAACAGTTGATTACGGCCTTATTGACG GTTCAGCGTTTAGCGCCAACTGTGGTCAGCCAAGCAGTGATTGAGCGGGTGGTGCAGGCCTTGCCCAGCAGCGAACGCCA ACAGCTCACAGCCAACGTCAACCAATGGCTATCAATCATTAATCGAAGCTAG
Upstream 100 bases:
>100_bases AGATAACCATTCCATACAGGTGCGCTCCTTCAATTAGCGAAAATGAATTCTTCCAAATTGTATGCAATCATGCTGCAATG TAAAGGGTATAATTTCTCAT
Downstream 100 bases:
>100_bases AAGGAGCCAGCATGCGCGACCGATTATATACCACCGAAGCCCTGATTATTCGGCGCTCCGATGTTGGCGAGGCTGATCGG ATTCTGACGATCTACACGCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 603; Mature: 603
Protein sequence:
>603_residues MIRTHASIEWLASLPTSERHVLAHLWQVADAAQLGQPSAIQALVARLSTPERSALDRVIAAGGKLAAKSLEREFGKIRSH RDIVTPRAYLLALHGQASVLERLYILGLLQPLKTLDGEYYVIFSDWLQALPAVSAPSLPTWQQHPSPSNWIEADLNQTET LLTTILALCYQQPLQLTRQLQLERDGLKAICQRIAVSTPASERQFPQLAWLRNLALEAGLLHIQHQQLQLAGNPINWLEA TPKQRLERLFNAWLVCDFDEFSLTELQPQTPFTLQAARQALWQVLTTAPPDQWLAFDDLLAQIQALHPELLRSDFEQPVI HNQSNDSFVGWQHWAKVEGAWIKAACQGPLFWLGLLDVDQLNHPQALRLTQWASCLLDPAHEPSQFAGQLQLSSDGLIRV PPTVEPLPRFQIQRITEWQSTDSHGTMLVRLTAHSYSQALQRGIQASQMQTFLQRWCDRPVPNDLQSLFQQWQNDRQHLL ARPALLLEADDPRLLNELAKLPNLPPYAELNPQLWELEIADSAALTNLLHTAGYAINPVSEPDQRISDHDLKQLITALLT VQRLAPTVVSQAVIERVVQALPSSERQQLTANVNQWLSIINRS
Sequences:
>Translated_603_residues MIRTHASIEWLASLPTSERHVLAHLWQVADAAQLGQPSAIQALVARLSTPERSALDRVIAAGGKLAAKSLEREFGKIRSH RDIVTPRAYLLALHGQASVLERLYILGLLQPLKTLDGEYYVIFSDWLQALPAVSAPSLPTWQQHPSPSNWIEADLNQTET LLTTILALCYQQPLQLTRQLQLERDGLKAICQRIAVSTPASERQFPQLAWLRNLALEAGLLHIQHQQLQLAGNPINWLEA TPKQRLERLFNAWLVCDFDEFSLTELQPQTPFTLQAARQALWQVLTTAPPDQWLAFDDLLAQIQALHPELLRSDFEQPVI HNQSNDSFVGWQHWAKVEGAWIKAACQGPLFWLGLLDVDQLNHPQALRLTQWASCLLDPAHEPSQFAGQLQLSSDGLIRV PPTVEPLPRFQIQRITEWQSTDSHGTMLVRLTAHSYSQALQRGIQASQMQTFLQRWCDRPVPNDLQSLFQQWQNDRQHLL ARPALLLEADDPRLLNELAKLPNLPPYAELNPQLWELEIADSAALTNLLHTAGYAINPVSEPDQRISDHDLKQLITALLT VQRLAPTVVSQAVIERVVQALPSSERQQLTANVNQWLSIINRS >Mature_603_residues MIRTHASIEWLASLPTSERHVLAHLWQVADAAQLGQPSAIQALVARLSTPERSALDRVIAAGGKLAAKSLEREFGKIRSH RDIVTPRAYLLALHGQASVLERLYILGLLQPLKTLDGEYYVIFSDWLQALPAVSAPSLPTWQQHPSPSNWIEADLNQTET LLTTILALCYQQPLQLTRQLQLERDGLKAICQRIAVSTPASERQFPQLAWLRNLALEAGLLHIQHQQLQLAGNPINWLEA TPKQRLERLFNAWLVCDFDEFSLTELQPQTPFTLQAARQALWQVLTTAPPDQWLAFDDLLAQIQALHPELLRSDFEQPVI HNQSNDSFVGWQHWAKVEGAWIKAACQGPLFWLGLLDVDQLNHPQALRLTQWASCLLDPAHEPSQFAGQLQLSSDGLIRV PPTVEPLPRFQIQRITEWQSTDSHGTMLVRLTAHSYSQALQRGIQASQMQTFLQRWCDRPVPNDLQSLFQQWQNDRQHLL ARPALLLEADDPRLLNELAKLPNLPPYAELNPQLWELEIADSAALTNLLHTAGYAINPVSEPDQRISDHDLKQLITALLT VQRLAPTVVSQAVIERVVQALPSSERQQLTANVNQWLSIINRS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 68055; Mature: 68055
Theoretical pI: Translated: 6.13; Mature: 6.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRTHASIEWLASLPTSERHVLAHLWQVADAAQLGQPSAIQALVARLSTPERSALDRVIA CCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHH AGGKLAAKSLEREFGKIRSHRDIVTPRAYLLALHGQASVLERLYILGLLQPLKTLDGEYY CCCHHHHHHHHHHHHHHHCCCCCCCCHHHHEEECCHHHHHHHHHHHHHHHHHHHCCCCEE VIFSDWLQALPAVSAPSLPTWQQHPSPSNWIEADLNQTETLLTTILALCYQQPLQLTRQL EEHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH QLERDGLKAICQRIAVSTPASERQFPQLAWLRNLALEAGLLHIQHQQLQLAGNPINWLEA HHHHHHHHHHHHHHHCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCC TPKQRLERLFNAWLVCDFDEFSLTELQPQTPFTLQAARQALWQVLTTAPPDQWLAFDDLL CHHHHHHHHHHHHEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHH AQIQALHPELLRSDFEQPVIHNQSNDSFVGWQHWAKVEGAWIKAACQGPLFWLGLLDVDQ HHHHHHCHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHCCHHHHHHHCCCEEEEECCCHHH LNHPQALRLTQWASCLLDPAHEPSQFAGQLQLSSDGLIRVPPTVEPLPRFQIQRITEWQS CCCCCHHHHHHHHHHHCCCCCCCHHHHCEEEECCCCEEECCCCCCCCCHHHHHHHHHHCC TDSHGTMLVRLTAHSYSQALQRGIQASQMQTFLQRWCDRPVPNDLQSLFQQWQNDRQHLL CCCCCEEEEEEEHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH ARPALLLEADDPRLLNELAKLPNLPPYAELNPQLWELEIADSAALTNLLHTAGYAINPVS HCCCCEEECCCHHHHHHHHHCCCCCCCCCCCCCEEEEEECHHHHHHHHHHHCCCCCCCCC EPDQRISDHDLKQLITALLTVQRLAPTVVSQAVIERVVQALPSSERQQLTANVNQWLSII CCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH NRS CCC >Mature Secondary Structure MIRTHASIEWLASLPTSERHVLAHLWQVADAAQLGQPSAIQALVARLSTPERSALDRVIA CCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHH AGGKLAAKSLEREFGKIRSHRDIVTPRAYLLALHGQASVLERLYILGLLQPLKTLDGEYY CCCHHHHHHHHHHHHHHHCCCCCCCCHHHHEEECCHHHHHHHHHHHHHHHHHHHCCCCEE VIFSDWLQALPAVSAPSLPTWQQHPSPSNWIEADLNQTETLLTTILALCYQQPLQLTRQL EEHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH QLERDGLKAICQRIAVSTPASERQFPQLAWLRNLALEAGLLHIQHQQLQLAGNPINWLEA HHHHHHHHHHHHHHHCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCC TPKQRLERLFNAWLVCDFDEFSLTELQPQTPFTLQAARQALWQVLTTAPPDQWLAFDDLL CHHHHHHHHHHHHEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHH AQIQALHPELLRSDFEQPVIHNQSNDSFVGWQHWAKVEGAWIKAACQGPLFWLGLLDVDQ HHHHHHCHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHCCHHHHHHHCCCEEEEECCCHHH LNHPQALRLTQWASCLLDPAHEPSQFAGQLQLSSDGLIRVPPTVEPLPRFQIQRITEWQS CCCCCHHHHHHHHHHHCCCCCCCHHHHCEEEECCCCEEECCCCCCCCCHHHHHHHHHHCC TDSHGTMLVRLTAHSYSQALQRGIQASQMQTFLQRWCDRPVPNDLQSLFQQWQNDRQHLL CCCCCEEEEEEEHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH ARPALLLEADDPRLLNELAKLPNLPPYAELNPQLWELEIADSAALTNLLHTAGYAINPVS HCCCCEEECCCHHHHHHHHHCCCCCCCCCCCCCEEEEEECHHHHHHHHHHHCCCCCCCCC EPDQRISDHDLKQLITALLTVQRLAPTVVSQAVIERVVQALPSSERQQLTANVNQWLSII CCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH NRS CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA