| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159898394
Identifier: 159898394
GI number: 159898394
Start: 2211776
End: 2212198
Strand: Reverse
Name: 159898394
Synonym: Haur_1870
Alternate gene names: NA
Gene position: 2212198-2211776 (Counterclockwise)
Preceding gene: 159898395
Following gene: 159898393
Centisome position: 34.86
GC content: 42.55
Gene sequence:
>423_bases ATGAAACCAACATTTTATCGCCAAGAAGCCCTTGAAGTCTATCTCAAACAACAAACGACAATCAATCCACTCTCGATTGA TGAAAGTCGCCCACGCTATTGGCTATGGCTGATCATTTGTGGGTTAGGGCTTGGATTAAGCTGGTTGTTGCTCCAACCAC AACCACAACAGCCCAATTCCAGTGCATCTGTGATCAATCAGCGACAAATTCGCTATCAAACCAAACAATCAGTCATGCTT AATCAAATAGTCAATGTTTATGTCAATCAAGTAGCTATTTCAGCAACAGTGGCGCAAGTTAACCCCCATCAGGATGCAAC AACAGTTGTATTAACCCTTCCCACGCTGGTATACCCAGCCGATCAGTTGGTTATTTTTGAAGATAGCCAAACCTTGGGCA GTCTATTAATGAATAGTTGGTAG
Upstream 100 bases:
>100_bases AGCCCATCAGTATCGCTGCTTGGATCACTGTTGTATCGCTCCAGTAGCTGTTGCTCGCAACCCAATTTCGTTATGCTTGA GCTAGCGAAATGGAGTTGTG
Downstream 100 bases:
>100_bases CGCATATGATTTTTACCAAGCCAAACACAAATCAGCTTCTAAAACGCTACACTCAACGGCGCAAAGTACCAGTTTTATTG CAAATGAGCCAAATCGAGTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 140; Mature: 140
Protein sequence:
>140_residues MKPTFYRQEALEVYLKQQTTINPLSIDESRPRYWLWLIICGLGLGLSWLLLQPQPQQPNSSASVINQRQIRYQTKQSVML NQIVNVYVNQVAISATVAQVNPHQDATTVVLTLPTLVYPADQLVIFEDSQTLGSLLMNSW
Sequences:
>Translated_140_residues MKPTFYRQEALEVYLKQQTTINPLSIDESRPRYWLWLIICGLGLGLSWLLLQPQPQQPNSSASVINQRQIRYQTKQSVML NQIVNVYVNQVAISATVAQVNPHQDATTVVLTLPTLVYPADQLVIFEDSQTLGSLLMNSW >Mature_140_residues MKPTFYRQEALEVYLKQQTTINPLSIDESRPRYWLWLIICGLGLGLSWLLLQPQPQQPNSSASVINQRQIRYQTKQSVML NQIVNVYVNQVAISATVAQVNPHQDATTVVLTLPTLVYPADQLVIFEDSQTLGSLLMNSW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15930; Mature: 15930
Theoretical pI: Translated: 7.35; Mature: 7.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKPTFYRQEALEVYLKQQTTINPLSIDESRPRYWLWLIICGLGLGLSWLLLQPQPQQPNS CCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEECCCCCCCCC SASVINQRQIRYQTKQSVMLNQIVNVYVNQVAISATVAQVNPHQDATTVVLTLPTLVYPA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCEEEEEEECHHHCCC DQLVIFEDSQTLGSLLMNSW CEEEEEECCHHHHHHHHCCC >Mature Secondary Structure MKPTFYRQEALEVYLKQQTTINPLSIDESRPRYWLWLIICGLGLGLSWLLLQPQPQQPNS CCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEECCCCCCCCC SASVINQRQIRYQTKQSVMLNQIVNVYVNQVAISATVAQVNPHQDATTVVLTLPTLVYPA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCEEEEEEECHHHCCC DQLVIFEDSQTLGSLLMNSW CEEEEEECCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA