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The map label for this gene is ynfA [C]

Identifier: 159898322

GI number: 159898322

Start: 2086933

End: 2087265

Strand: Reverse

Name: ynfA [C]

Synonym: Haur_1798

Alternate gene names: 159898322

Gene position: 2087265-2086933 (Counterclockwise)

Preceding gene: 159898335

Following gene: 159898318

Centisome position: 32.89

GC content: 51.05

Gene sequence:

>333_bases
ATGCAAGTATTTCGCGCAGTTGTATTGTTTATCTTGGCGGGCTTGGCCGAAATTGCTGGCGGTTATTTGGTTTGGCAGTG
GCTGCGTGCCGATCGCTCGATCTGGTTTGGGGTACTAGGGGCAATTTTGTTGGTTGGCTATGGGTTTTTACCAACGCTTC
AGCCGCAAGTTTGGAGTTTTGGGCGGGTTTATGCAGCCTATGGTGGGGTGTTTATTGTGCTCTCGCTCGCTTGGGGCTGG
CTGATCGATCATAATCCGCCGGATCAGCCAAGCCTAGTTGGAGCCTGTTTAGCCCTAGTTGGTGCAGCAATTATCTTGTA
TTGGCCACGATAA

Upstream 100 bases:

>100_bases
GCTCAAGAACTCGGAGCTACACGCATTCAGATGGTTGCGAGATAGTTTTTGCTCCTGCTAAACTCCTTGGGGATCAGGTC
ATTTAACTCAAGGATAGCTC

Downstream 100 bases:

>100_bases
TAATTGGGGCAGGATTCAGAGATCAGGGGCTAGGGATCAGGTTCTGGACAGAGAAGCCTTCGTGTAACTTCGTGCTCTTC
GTGGATCGAAGAACATCATG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 110; Mature: 110

Protein sequence:

>110_residues
MQVFRAVVLFILAGLAEIAGGYLVWQWLRADRSIWFGVLGAILLVGYGFLPTLQPQVWSFGRVYAAYGGVFIVLSLAWGW
LIDHNPPDQPSLVGACLALVGAAIILYWPR

Sequences:

>Translated_110_residues
MQVFRAVVLFILAGLAEIAGGYLVWQWLRADRSIWFGVLGAILLVGYGFLPTLQPQVWSFGRVYAAYGGVFIVLSLAWGW
LIDHNPPDQPSLVGACLALVGAAIILYWPR
>Mature_110_residues
MQVFRAVVLFILAGLAEIAGGYLVWQWLRADRSIWFGVLGAILLVGYGFLPTLQPQVWSFGRVYAAYGGVFIVLSLAWGW
LIDHNPPDQPSLVGACLALVGAAIILYWPR

Specific function: Unknown

COG id: COG1742

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0060 family

Homologues:

Organism=Escherichia coli, GI1787865, Length=104, Percent_Identity=37.5, Blast_Score=60, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1798_HERA2 (A9B7R3)

Other databases:

- EMBL:   CP000875
- RefSeq:   YP_001544569.1
- GeneID:   5733700
- GenomeReviews:   CP000875_GR
- KEGG:   hau:Haur_1798
- HOGENOM:   HBG313568
- OMA:   TRWDVAG
- BioCyc:   HAUR316274:HAUR_1798-MONOMER
- HAMAP:   MF_00010
- InterPro:   IPR003844

Pfam domain/function: PF02694 UPF0060

EC number: NA

Molecular weight: Translated: 12119; Mature: 12119

Theoretical pI: Translated: 8.46; Mature: 8.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xf744504)-; HASH(0x124a2f1c)-; HASH(0x13cc6e24)-; HASH(0x14070d80)-;

Cys/Met content:

0.9 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQVFRAVVLFILAGLAEIAGGYLVWQWLRADRSIWFGVLGAILLVGYGFLPTLQPQVWSF
CHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH
GRVYAAYGGVFIVLSLAWGWLIDHNPPDQPSLVGACLALVGAAIILYWPR
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCH
>Mature Secondary Structure
MQVFRAVVLFILAGLAEIAGGYLVWQWLRADRSIWFGVLGAILLVGYGFLPTLQPQVWSF
CHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH
GRVYAAYGGVFIVLSLAWGWLIDHNPPDQPSLVGACLALVGAAIILYWPR
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA