| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159898335
Identifier: 159898335
GI number: 159898335
Start: 2103908
End: 2105893
Strand: Reverse
Name: 159898335
Synonym: Haur_1811
Alternate gene names: NA
Gene position: 2105893-2103908 (Counterclockwise)
Preceding gene: 159898336
Following gene: 159898322
Centisome position: 33.18
GC content: 52.62
Gene sequence:
>1986_bases ATGCCCGGAAAACGTTCATCGCTGGTGATCGTTGCAGCCTTGGTGGTCGCATTATTGAGTAGCTTTGCCGCCGCCACTCT CGTCACTCCTACCGCCGCTTCGTCCGATGGTTTTTGGCAAGATGTGAAGGAAAGTCGGATTGCCCAAAAAGGTGCTCGCC AAATTGTGCCAACGATCTATCGCACCGTTGCACTTGATGTCGCTGGATTGAGCCAATATTTGGCCAAAGCACCACTAGAG CAAGATCAGTCGGTGGCAAACTCGTTGTATACCCTGCAATTGCCCATGCCCAATGGCAAATTCGAGCAATTCCGCGTTGT CGAATCGCCGATTATGGAGCCAGAACTAGCGGCAAAATTCCCCGAAATTCGCACCTACTTAATCCTTGGGGTGGATACTC CCAATCTGAGCGGGCGCTTGGATCTGACCCCCGCCGGCTTTCATGGCTTAATTCTAGGCGATCAAGGCCGGATTTTCATT GATCCCTACAGCGCTGGCGATACTCAACATTACATCGTTTACGATAGCAAAAATTTTGTGCCCAGCAGCCAAAAATTGGC TGATCGCCAAGTCGAAGATTATGTGATCGACCTACCATTGACCGATGATGGCTTGGCAGCACCCAAAGCGGTTGGCGATA AATTGCGCACCTACCGTTTGGCCATGGCCGCCACTGGCGAGTACACTGCCTATCATGGTGGAACCGTTGCCAAAGGCTTG GCGGCAATCACCACCAGCGTCAATCGGGTTAACGCAGTGTACGAACGCGAAGTTGCGGTACGCATGGTACTTGTTGCCAA CAACAGCAATATCATTTACACCAACGCCAGCACCGACCCCTACACCAACAACAATGGGGTTACGATGCTCAGCCAAAATC AGACCAATGTTCGCAATGTAATTGGCAATGCCAATTATGATATTGGTCACGTGTTCAGCACTGGCGGCGGCGGGGTAGCC TCGTTAGGCTCAGTCTGCTCGACCAACTACAAAGCTCAAGGCGTAACTGGCTCATCGGCTCCAGTTGGCGATCCATTTGA TATTGATTATGTGGCCCACGAAATTGGTCATCAATTTGGCGGCAACCATACCTTCAATGGCACAACTGGTAGTTGTGGTG GTGGCAATCGCGCTAGTAGCGCCGCCTACGAGCCAGGTAGCGGCTCGACAATTATGGCCTACGCAGGGATCTGTGGCGCT GAAAACTTACAATCCAACAGCGATCCGTATTTCCATTCCAAGAGCTTGAACGAAATTACGACCTTCATCACAACTGGCGG CGGCTCAAGCTGTGGCACAGCAACCAACACTGGCAACACCGCTCCGGTGGCCAATGCTGGGGCCGATTACACGATTCCAC GCAGCACACCATTCGAATTAACCGGCACTGGCAGCGATGCCAACGGCGATAGCATGACCTACAACTGGGAGCAATATAAC TTGGGCACGGCTGCGCCACCCAACACCGACAACGGCTCACGCCCAATTTTCCGTAGCTTCAACCCAAGCACCAACCCTAA GCGCTCGTTCCCTAAATTGAGCGATATTTTGAACAATACCGCGACAATTGGTGAATCATTGCCAACCACCAGCCGCACCA TGGTTTTCCGGCTGATTGTGCGCGATAACCGGGCAGGCGGCGGCAGCTATGCGATTGATAGCGCCAATGTGACGGTCAGC AGTGCGGCTGGGCCATTCGCCGTAACCTCGCCGAATACCGCCGTCACTTGGACTCGCAACAGCAGCCGTACCATCACTTG GAATGTTGCCAGCACCACCGCTGCACCAATTAGCTGCGCCAATGTTGAAATTTTGTTCTCAAGTAATGGTGGCAGCAGCT TCAGCAGCTTGGTTAGCTCAACCCCCAACGATGGCAGCCAAGCCGTTACCATCCCCAACACCGCAACCACCCAAGCACGA ATCAAAGTACGCTGTGCCAACAACGTCTTCTTTGATCTTTCAAATGTGAACTTTACCGTAAACTAG
Upstream 100 bases:
>100_bases GGTGCTTAAATTTGCGATAAAAATTAACAAACCTCAAAATTAATTAAATAATTTAATGTATAATAGCTGGGTATCCACTT CTACCCCTAGGAGGTTTGGC
Downstream 100 bases:
>100_bases TTAAAGCTTGTGCCCTTCGTGGATCAATTATGATGATCCACGAAGGGCACAAACCATAAATCAATGCTGATCGCTCCTCT TTCAGAAGCTTTATTCAGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 661; Mature: 660
Protein sequence:
>661_residues MPGKRSSLVIVAALVVALLSSFAAATLVTPTAASSDGFWQDVKESRIAQKGARQIVPTIYRTVALDVAGLSQYLAKAPLE QDQSVANSLYTLQLPMPNGKFEQFRVVESPIMEPELAAKFPEIRTYLILGVDTPNLSGRLDLTPAGFHGLILGDQGRIFI DPYSAGDTQHYIVYDSKNFVPSSQKLADRQVEDYVIDLPLTDDGLAAPKAVGDKLRTYRLAMAATGEYTAYHGGTVAKGL AAITTSVNRVNAVYEREVAVRMVLVANNSNIIYTNASTDPYTNNNGVTMLSQNQTNVRNVIGNANYDIGHVFSTGGGGVA SLGSVCSTNYKAQGVTGSSAPVGDPFDIDYVAHEIGHQFGGNHTFNGTTGSCGGGNRASSAAYEPGSGSTIMAYAGICGA ENLQSNSDPYFHSKSLNEITTFITTGGGSSCGTATNTGNTAPVANAGADYTIPRSTPFELTGTGSDANGDSMTYNWEQYN LGTAAPPNTDNGSRPIFRSFNPSTNPKRSFPKLSDILNNTATIGESLPTTSRTMVFRLIVRDNRAGGGSYAIDSANVTVS SAAGPFAVTSPNTAVTWTRNSSRTITWNVASTTAAPISCANVEILFSSNGGSSFSSLVSSTPNDGSQAVTIPNTATTQAR IKVRCANNVFFDLSNVNFTVN
Sequences:
>Translated_661_residues MPGKRSSLVIVAALVVALLSSFAAATLVTPTAASSDGFWQDVKESRIAQKGARQIVPTIYRTVALDVAGLSQYLAKAPLE QDQSVANSLYTLQLPMPNGKFEQFRVVESPIMEPELAAKFPEIRTYLILGVDTPNLSGRLDLTPAGFHGLILGDQGRIFI DPYSAGDTQHYIVYDSKNFVPSSQKLADRQVEDYVIDLPLTDDGLAAPKAVGDKLRTYRLAMAATGEYTAYHGGTVAKGL AAITTSVNRVNAVYEREVAVRMVLVANNSNIIYTNASTDPYTNNNGVTMLSQNQTNVRNVIGNANYDIGHVFSTGGGGVA SLGSVCSTNYKAQGVTGSSAPVGDPFDIDYVAHEIGHQFGGNHTFNGTTGSCGGGNRASSAAYEPGSGSTIMAYAGICGA ENLQSNSDPYFHSKSLNEITTFITTGGGSSCGTATNTGNTAPVANAGADYTIPRSTPFELTGTGSDANGDSMTYNWEQYN LGTAAPPNTDNGSRPIFRSFNPSTNPKRSFPKLSDILNNTATIGESLPTTSRTMVFRLIVRDNRAGGGSYAIDSANVTVS SAAGPFAVTSPNTAVTWTRNSSRTITWNVASTTAAPISCANVEILFSSNGGSSFSSLVSSTPNDGSQAVTIPNTATTQAR IKVRCANNVFFDLSNVNFTVN >Mature_660_residues PGKRSSLVIVAALVVALLSSFAAATLVTPTAASSDGFWQDVKESRIAQKGARQIVPTIYRTVALDVAGLSQYLAKAPLEQ DQSVANSLYTLQLPMPNGKFEQFRVVESPIMEPELAAKFPEIRTYLILGVDTPNLSGRLDLTPAGFHGLILGDQGRIFID PYSAGDTQHYIVYDSKNFVPSSQKLADRQVEDYVIDLPLTDDGLAAPKAVGDKLRTYRLAMAATGEYTAYHGGTVAKGLA AITTSVNRVNAVYEREVAVRMVLVANNSNIIYTNASTDPYTNNNGVTMLSQNQTNVRNVIGNANYDIGHVFSTGGGGVAS LGSVCSTNYKAQGVTGSSAPVGDPFDIDYVAHEIGHQFGGNHTFNGTTGSCGGGNRASSAAYEPGSGSTIMAYAGICGAE NLQSNSDPYFHSKSLNEITTFITTGGGSSCGTATNTGNTAPVANAGADYTIPRSTPFELTGTGSDANGDSMTYNWEQYNL GTAAPPNTDNGSRPIFRSFNPSTNPKRSFPKLSDILNNTATIGESLPTTSRTMVFRLIVRDNRAGGGSYAIDSANVTVSS AAGPFAVTSPNTAVTWTRNSSRTITWNVASTTAAPISCANVEILFSSNGGSSFSSLVSSTPNDGSQAVTIPNTATTQARI KVRCANNVFFDLSNVNFTVN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 69572; Mature: 69441
Theoretical pI: Translated: 6.12; Mature: 6.12
Prosite motif: PS50215 ADAM_MEPRO
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPGKRSSLVIVAALVVALLSSFAAATLVTPTAASSDGFWQDVKESRIAQKGARQIVPTIY CCCCCCHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH RTVALDVAGLSQYLAKAPLEQDQSVANSLYTLQLPMPNGKFEQFRVVESPIMEPELAAKF HHHHHHHHHHHHHHHHCCCCHHHHHHCCEEEEEEECCCCCCCEEEEHHCCCCCHHHHHCC PEIRTYLILGVDTPNLSGRLDLTPAGFHGLILGDQGRIFIDPYSAGDTQHYIVYDSKNFV CCEEEEEEEEECCCCCCCEEEECCCCCEEEEECCCCEEEECCCCCCCCEEEEEECCCCCC PSSQKLADRQVEDYVIDLPLTDDGLAAPKAVGDKLRTYRLAMAATGEYTAYHGGTVAKGL CCHHHHHHCCCCCEEEEECCCCCCCCCCHHHHHHHHEEEEEEEECCCEEEECCCHHHHHH AAITTSVNRVNAVYEREVAVRMVLVANNSNIIYTNASTDPYTNNNGVTMLSQNQTNVRNV HHHHHHHHHHHHHHCCCEEEEEEEEECCCEEEEECCCCCCCCCCCCEEEEECCCCHHHHH IGNANYDIGHVFSTGGGGVASLGSVCSTNYKAQGVTGSSAPVGDPFDIDYVAHEIGHQFG HCCCCCCEEEEEECCCCCHHHHHHHHCCCCEECCCCCCCCCCCCCCCHHHHHHHHHHHHC GNHTFNGTTGSCGGGNRASSAAYEPGSGSTIMAYAGICGAENLQSNSDPYFHSKSLNEIT CCEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCEECCCCCCEE TFITTGGGSSCGTATNTGNTAPVANAGADYTIPRSTPFELTGTGSDANGDSMTYNWEQYN EEEECCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCEEEEECCCCCCCCCEEEEEHEEC LGTAAPPNTDNGSRPIFRSFNPSTNPKRSFPKLSDILNNTATIGESLPTTSRTMVFRLIV CCCCCCCCCCCCCCCEEECCCCCCCCCCCCCHHHHHHCCHHHCCCCCCCCCCEEEEEEEE RDNRAGGGSYAIDSANVTVSSAAGPFAVTSPNTAVTWTRNSSRTITWNVASTTAAPISCA ECCCCCCCCEEEECCCEEEECCCCCEEEECCCEEEEEECCCCEEEEEEECCCCCCCEEEC NVEILFSSNGGSSFSSLVSSTPNDGSQAVTIPNTATTQARIKVRCANNVFFDLSNVNFTV EEEEEEECCCCCHHHHHHHCCCCCCCEEEECCCCCCCEEEEEEEEECCEEEEECCEEEEE N C >Mature Secondary Structure PGKRSSLVIVAALVVALLSSFAAATLVTPTAASSDGFWQDVKESRIAQKGARQIVPTIY CCCCCHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH RTVALDVAGLSQYLAKAPLEQDQSVANSLYTLQLPMPNGKFEQFRVVESPIMEPELAAKF HHHHHHHHHHHHHHHHCCCCHHHHHHCCEEEEEEECCCCCCCEEEEHHCCCCCHHHHHCC PEIRTYLILGVDTPNLSGRLDLTPAGFHGLILGDQGRIFIDPYSAGDTQHYIVYDSKNFV CCEEEEEEEEECCCCCCCEEEECCCCCEEEEECCCCEEEECCCCCCCCEEEEEECCCCCC PSSQKLADRQVEDYVIDLPLTDDGLAAPKAVGDKLRTYRLAMAATGEYTAYHGGTVAKGL CCHHHHHHCCCCCEEEEECCCCCCCCCCHHHHHHHHEEEEEEEECCCEEEECCCHHHHHH AAITTSVNRVNAVYEREVAVRMVLVANNSNIIYTNASTDPYTNNNGVTMLSQNQTNVRNV HHHHHHHHHHHHHHCCCEEEEEEEEECCCEEEEECCCCCCCCCCCCEEEEECCCCHHHHH IGNANYDIGHVFSTGGGGVASLGSVCSTNYKAQGVTGSSAPVGDPFDIDYVAHEIGHQFG HCCCCCCEEEEEECCCCCHHHHHHHHCCCCEECCCCCCCCCCCCCCCHHHHHHHHHHHHC GNHTFNGTTGSCGGGNRASSAAYEPGSGSTIMAYAGICGAENLQSNSDPYFHSKSLNEIT CCEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCEECCCCCCEE TFITTGGGSSCGTATNTGNTAPVANAGADYTIPRSTPFELTGTGSDANGDSMTYNWEQYN EEEECCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCEEEEECCCCCCCCCEEEEEHEEC LGTAAPPNTDNGSRPIFRSFNPSTNPKRSFPKLSDILNNTATIGESLPTTSRTMVFRLIV CCCCCCCCCCCCCCCEEECCCCCCCCCCCCCHHHHHHCCHHHCCCCCCCCCCEEEEEEEE RDNRAGGGSYAIDSANVTVSSAAGPFAVTSPNTAVTWTRNSSRTITWNVASTTAAPISCA ECCCCCCCCEEEECCCEEEECCCCCEEEECCCEEEEEECCCCEEEEEEECCCCCCCEEEC NVEILFSSNGGSSFSSLVSSTPNDGSQAVTIPNTATTQARIKVRCANNVFFDLSNVNFTV EEEEEEECCCCCHHHHHHHCCCCCCCEEEECCCCCCCEEEEEEEEECCEEEEECCEEEEE N C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA