| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is sumT [H]
Identifier: 159898268
GI number: 159898268
Start: 2030562
End: 2031353
Strand: Reverse
Name: sumT [H]
Synonym: Haur_1744
Alternate gene names: 159898268
Gene position: 2031353-2030562 (Counterclockwise)
Preceding gene: 159898269
Following gene: 159898265
Centisome position: 32.01
GC content: 53.41
Gene sequence:
>792_bases ATGACACGCGAAGGATTTGTTGCATTAGTCGGGGCTGGTCCAGGCTCCGCCGATTTAATTACCGTCAAAGGGTTGCGCCG TTTGCAAAGTGCCGATGTCGTGGTATTCGATGCCTTGGTGTTGCCCGAATTATTGGCCGAAGCTCGTAGCGATGCCGAGT TGATTCCGGCTGGCAAGCGTGGCGGCCAACATTCCGTCAGCCAAGATTGGATCAACGCAACCTTGATTGAGCACGCTCAG CAAGGTAAATTGGTGGTTCGACTCAAAGGCGGCGATCCATTTGTATTTGGGCGCGGTGGCGAGGAAGCTGCTGCCTTGAG CGCTGCCGGAATTGCATGGGAAGTTGTGCCCGGCATTTCTTCGGCGATTGCGGCCCCTGCCTATGCGGGCATTCCAGTGA CTCATCGCGATGTGGCTTCATCGGTTGTCTTTGTGACAGGTCATGAAGATCCAACCAAGCCAACCAGCCGCATCAATTGG CAAGCCTTGGCCCAAGGTGTTGATACCTTGGTCTTTTTGATGGGAATTACGCGAATCAACCACACAGTTGCCAGTTTGAT TGCCAATGGTCGCCCTGCCGATACTCCAACGGCGGTGATTCGCTGGGGCACAACTGCTGATCAAAAAACGGTGGTCGCAC CACTTGATCAAATTGAGGCTGCGGTTAAAGCGGCTGGCATCGGCGCACCAGCGATTTTAATTGTGGGCGAAGTTGTGGCG TTGCGTGAACAACTTAATTGGTTTGAATCGACAGTGCTTGAAATGCCCGAAGTTGTCCGAGCATTTGCCTAA
Upstream 100 bases:
>100_bases CGACACTAACCACGACAGAACGTGAGCAATATTTTGATCAATTGCTGGTTGAATTAGCCCAACAGCCGCCGACGCTCAAT CACTTGCCAACGGAGGATCT
Downstream 100 bases:
>100_bases GCAAGAGCATAGAGCAAAGAACATTGAACATAGCGATCGGGCTAGCAATAGCCTGATCTTTTTTTAACGCAGGGGATACA TGGCTAGTGGCTGAAGGCTC
Product: uroporphyrin-III C-methyltransferase
Products: NA
Alternate protein names: Urogen III methylase; SUMT; Uroporphyrinogen III methylase; UROM [H]
Number of amino acids: Translated: 263; Mature: 262
Protein sequence:
>263_residues MTREGFVALVGAGPGSADLITVKGLRRLQSADVVVFDALVLPELLAEARSDAELIPAGKRGGQHSVSQDWINATLIEHAQ QGKLVVRLKGGDPFVFGRGGEEAAALSAAGIAWEVVPGISSAIAAPAYAGIPVTHRDVASSVVFVTGHEDPTKPTSRINW QALAQGVDTLVFLMGITRINHTVASLIANGRPADTPTAVIRWGTTADQKTVVAPLDQIEAAVKAAGIGAPAILIVGEVVA LREQLNWFESTVLEMPEVVRAFA
Sequences:
>Translated_263_residues MTREGFVALVGAGPGSADLITVKGLRRLQSADVVVFDALVLPELLAEARSDAELIPAGKRGGQHSVSQDWINATLIEHAQ QGKLVVRLKGGDPFVFGRGGEEAAALSAAGIAWEVVPGISSAIAAPAYAGIPVTHRDVASSVVFVTGHEDPTKPTSRINW QALAQGVDTLVFLMGITRINHTVASLIANGRPADTPTAVIRWGTTADQKTVVAPLDQIEAAVKAAGIGAPAILIVGEVVA LREQLNWFESTVLEMPEVVRAFA >Mature_262_residues TREGFVALVGAGPGSADLITVKGLRRLQSADVVVFDALVLPELLAEARSDAELIPAGKRGGQHSVSQDWINATLIEHAQQ GKLVVRLKGGDPFVFGRGGEEAAALSAAGIAWEVVPGISSAIAAPAYAGIPVTHRDVASSVVFVTGHEDPTKPTSRINWQ ALAQGVDTLVFLMGITRINHTVASLIANGRPADTPTAVIRWGTTADQKTVVAPLDQIEAAVKAAGIGAPAILIVGEVVAL REQLNWFESTVLEMPEVVRAFA
Specific function: Catalyzes both methylations at C-2 and C-7 of uroporphyrinogen III leading to precorrin-1 and precorrin-2; their oxidative esterification gives respectively factor I octamethyl ester and sirohydrochlorin [H]
COG id: COG0007
COG function: function code H; Uroporphyrinogen-III methylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the precorrin methyltransferase family [H]
Homologues:
Organism=Escherichia coli, GI1789768, Length=250, Percent_Identity=46.4, Blast_Score=226, Evalue=8e-61, Organism=Saccharomyces cerevisiae, GI6322922, Length=264, Percent_Identity=35.2272727272727, Blast_Score=134, Evalue=2e-32,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000878 - InterPro: IPR014777 - InterPro: IPR014776 - InterPro: IPR006366 - InterPro: IPR003043 [H]
Pfam domain/function: PF00590 TP_methylase [H]
EC number: =2.1.1.107 [H]
Molecular weight: Translated: 27488; Mature: 27357
Theoretical pI: Translated: 5.32; Mature: 5.32
Prosite motif: PS00839 SUMT_1 ; PS00840 SUMT_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTREGFVALVGAGPGSADLITVKGLRRLQSADVVVFDALVLPELLAEARSDAELIPAGKR CCCCCEEEEEECCCCCCCEEEHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCEECCCCCC GGQHSVSQDWINATLIEHAQQGKLVVRLKGGDPFVFGRGGEEAAALSAAGIAWEVVPGIS CCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCEEEEECCCCHHHHHHHCCCEEEECCCCH SAIAAPAYAGIPVTHRDVASSVVFVTGHEDPTKPTSRINWQALAQGVDTLVFLMGITRIN HHHHCCCCCCCCCCHHHHHCCEEEEECCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHH HTVASLIANGRPADTPTAVIRWGTTADQKTVVAPLDQIEAAVKAAGIGAPAILIVGEVVA HHHHHHHHCCCCCCCCCEEEEECCCCCCCEEECCHHHHHHHHHHCCCCCCHHHHHHHHHH LREQLNWFESTVLEMPEVVRAFA HHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TREGFVALVGAGPGSADLITVKGLRRLQSADVVVFDALVLPELLAEARSDAELIPAGKR CCCCEEEEEECCCCCCCEEEHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCEECCCCCC GGQHSVSQDWINATLIEHAQQGKLVVRLKGGDPFVFGRGGEEAAALSAAGIAWEVVPGIS CCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCEEEEECCCCHHHHHHHCCCEEEECCCCH SAIAAPAYAGIPVTHRDVASSVVFVTGHEDPTKPTSRINWQALAQGVDTLVFLMGITRIN HHHHCCCCCCCCCCHHHHHCCEEEEECCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHH HTVASLIANGRPADTPTAVIRWGTTADQKTVVAPLDQIEAAVKAAGIGAPAILIVGEVVA HHHHHHHHCCCCCCCCCEEEEECCCCCCCEEECCHHHHHHHHHHCCCCCCHHHHHHHHHH LREQLNWFESTVLEMPEVVRAFA HHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]