| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is osmC [C]
Identifier: 159898265
GI number: 159898265
Start: 2027309
End: 2027728
Strand: Reverse
Name: osmC [C]
Synonym: Haur_1741
Alternate gene names: 159898265
Gene position: 2027728-2027309 (Counterclockwise)
Preceding gene: 159898268
Following gene: 159898258
Centisome position: 31.95
GC content: 53.1
Gene sequence:
>420_bases ATGGCACTTAAAACCTTATATACGACCACCATGACAGCCACCGGCGGACGCACTGGCCAAGTAACCGCGCCTGATGGCAG CTTAACCCTTGATTTGGCCTCGCCCAAGGAATTAGGTGGGCCAGGTGGCGCGACCAACCCTGAGCAGTTGTTTGCTGCTG GCTATGCTGCCTGTTTTCATAGCGCCTTGAGTTTGGTTGCCAAGCATGCCAAAGCCGATCCAACTGATTCAAGCGTGACT GGCACGGTCAGCCTTGGGGCCAATGCCCAAGGTGGCTATGGTCTAGCCGTAACTTTGACCATCGATTTACCCAAAGTCGA ACGCGAAACGGCCTTAGCCTTGGTTGAAAAAGCGCATACAGTTTGCCCATATAGCAACGCAACCCGTGGCAATATCGAGG TTGAGTTGATCGTAAAGTAG
Upstream 100 bases:
>100_bases CTAAATCACCCTAGCACGAAAATTAGCTCTTGACAAATTATATTGCGTGCAATATAATTGCTATCAATATAAATCTAGTG TATTTTTGGAGATTGATGAT
Downstream 100 bases:
>100_bases GGTTCAGGGGTTAGAGATCCGGGGCTAGTATGTTTGCAATCACAAAGAGCGTAAAGATCATAAGTAATTAAATAGCATTA ACACAGAGGCGCAGAGAATC
Product: OsmC family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 139; Mature: 138
Protein sequence:
>139_residues MALKTLYTTTMTATGGRTGQVTAPDGSLTLDLASPKELGGPGGATNPEQLFAAGYAACFHSALSLVAKHAKADPTDSSVT GTVSLGANAQGGYGLAVTLTIDLPKVERETALALVEKAHTVCPYSNATRGNIEVELIVK
Sequences:
>Translated_139_residues MALKTLYTTTMTATGGRTGQVTAPDGSLTLDLASPKELGGPGGATNPEQLFAAGYAACFHSALSLVAKHAKADPTDSSVT GTVSLGANAQGGYGLAVTLTIDLPKVERETALALVEKAHTVCPYSNATRGNIEVELIVK >Mature_138_residues ALKTLYTTTMTATGGRTGQVTAPDGSLTLDLASPKELGGPGGATNPEQLFAAGYAACFHSALSLVAKHAKADPTDSSVTG TVSLGANAQGGYGLAVTLTIDLPKVERETALALVEKAHTVCPYSNATRGNIEVELIVK
Specific function: Unknown
COG id: COG1764
COG function: function code O; Predicted redox protein, regulator of disulfide bond formation
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the osmC/ohr family [H]
Homologues:
None
Paralogues:
None
Copy number: 3180 Molecules/Cell In: Early Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015946 - InterPro: IPR019953 - InterPro: IPR003718 [H]
Pfam domain/function: PF02566 OsmC [H]
EC number: NA
Molecular weight: Translated: 14146; Mature: 14015
Theoretical pI: Translated: 6.24; Mature: 6.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALKTLYTTTMTATGGRTGQVTAPDGSLTLDLASPKELGGPGGATNPEQLFAAGYAACFH CCCCEEEEEEEEECCCCCCEEECCCCCEEEEECCCHHCCCCCCCCCHHHHHHHHHHHHHH SALSLVAKHAKADPTDSSVTGTVSLGANAQGGYGLAVTLTIDLPKVERETALALVEKAHT HHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCEEEEEEEEEECCCCCHHHHHHHHHHHHH VCPYSNATRGNIEVELIVK CCCCCCCCCCCEEEEEEEC >Mature Secondary Structure ALKTLYTTTMTATGGRTGQVTAPDGSLTLDLASPKELGGPGGATNPEQLFAAGYAACFH CCCEEEEEEEEECCCCCCEEECCCCCEEEEECCCHHCCCCCCCCCHHHHHHHHHHHHHH SALSLVAKHAKADPTDSSVTGTVSLGANAQGGYGLAVTLTIDLPKVERETALALVEKAHT HHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCEEEEEEEEEECCCCCHHHHHHHHHHHHH VCPYSNATRGNIEVELIVK CCCCCCCCCCCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA