| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
Click here to switch to the map view.
The map label for this gene is pkn1 [H]
Identifier: 159898226
GI number: 159898226
Start: 1979863
End: 1981395
Strand: Reverse
Name: pkn1 [H]
Synonym: Haur_1702
Alternate gene names: 159898226
Gene position: 1981395-1979863 (Counterclockwise)
Preceding gene: 159898230
Following gene: 159898225
Centisome position: 31.22
GC content: 44.29
Gene sequence:
>1533_bases ATGACGGTTTCGCCAACATTTGCGGTACAGTTAAGCCAACTCAAACAAACAGCATCGATGTCAATCCGAGTCTTAAGCCA AAAAACCGCCATCCCCGAAGATACGCTCGACGATTGGTTAAAAGGCAAAAGTCGGCCACGCAATTGGGAACGGGTGATCA TCGTTGCGGCGGCACTCCAAGCCAATTATCAGCAAGCGAACAACCTCTTACAAGCCATCAAAACTTCACCACTTGAACTA CTACCATGGCATCAAATTGAATATTTTATTCAGCCACGTGAACAACAGATTGGCACAAATGTGCATAAGCAAACCATTAA TCCAATTTTAGCAATGGTCCAAACATGGTATGAGGCGCAAATCCAATTGCTGCAACAGGAGGTAAAGGCTGATTCAGTTG ATCACGTAGAAGCACATAATCCTCAATTAGCACCAACAACTGAAGTTAAGCCAAATCCAAGTGATCCAATTGCTATCATA CACACGGAAATTCACGAGCAAACAAAACATCAAAAACATATAAATCTAAGTCTACCCAAAAAACGTTTGTTGTGGTTATT TGGCATTAGTAGCATTACGATTATGCTCATGGGGCTGAATCTGCAACATGCGAAATCAAACGATCAATCAGTAATAGACA TTCCATCGCAACACAATTCAAATCTTACTAACTCCATGATTACAATTCCGGCTGGATTTTTCATTCAGGGAAGTAATTAT GCTGATATCGCATACTATGCTCAATTATGTATTGATTATGGTGCTGCCTGTACAGAATTAGAGTTTGATGATGAATTTGA TCAAAATGGCCAAGCGCGTCAGGTATTTCTGAATAGCTACCGCATTGATAAATATGAAGTAACGAATGCTCAATTTGCCC AATTCGTTGAGCAAACTCAGTATATAACCTACGCTGAACGCCAAGGAGAGAGCATGATTCTTGAGGTTATCGAAACGGCT GGCTCTAAGGAAACACTGAACTTTAGCGCGATTAAAGGCGCTTTTTGGAAACAACCATACGGCCCCAATTCATCAATTGA CGACAAAGCCGATTATCCAGTCATTCATATTCACTATGAAGATGCAGTGGCGTACTGCACAGCCAAGCATAAACGATTGC CCACCGAAGCCGAGTGGGAGAAAGCGGCGCGAGGCGTTGAAGGGTGGCGATTTCCGTGGGGCAATGAGTGGAAGTCTGGC TTAAGCAATCATGCGATTCCGCTGCGATCCCATATTTTACAAGTTCGTGGTTTACAAGCAATTGGCCAATCTCCGCAAAG TATCAGCCCATATGGGGTACACGACCTCTTAGGGAACGTAAGCGAGTGGACTGCCGATTGGTATCAGCCAAGCTATTATC AAAATAATCCTGCTAGCCAAAACCCTCAAGGTCCCGAGCTAGGCAACAGCCATGTCAAGCGTGGAGGGAGTTGGGCAACA CCACCTGGCTATCTGCATAATAGTTGGCGGATTGGCACTCCCGACCAAACAACCGATCGCTTAGGCTTTCGCTGCGCCGC CGATGTAAATTAA
Upstream 100 bases:
>100_bases AGCCAATCGGAGAATGAACAGGGATTAAGGAGCAAACCAAGGGGGAATGAGGGGGGAAATGGGGTGAAAAAGAGTGTGTA TCACGGTTGGAGGATTTTTA
Downstream 100 bases:
>100_bases AAACAAAAGCCTCCGTTGGATTACCAACGGAGGCTTTGTGGAGCGGTACGCATCCCCCTACGTTCCCACAGCGGGTGCTG CAGTAGCCTCGGTGTGTGTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 510; Mature: 509
Protein sequence:
>510_residues MTVSPTFAVQLSQLKQTASMSIRVLSQKTAIPEDTLDDWLKGKSRPRNWERVIIVAAALQANYQQANNLLQAIKTSPLEL LPWHQIEYFIQPREQQIGTNVHKQTINPILAMVQTWYEAQIQLLQQEVKADSVDHVEAHNPQLAPTTEVKPNPSDPIAII HTEIHEQTKHQKHINLSLPKKRLLWLFGISSITIMLMGLNLQHAKSNDQSVIDIPSQHNSNLTNSMITIPAGFFIQGSNY ADIAYYAQLCIDYGAACTELEFDDEFDQNGQARQVFLNSYRIDKYEVTNAQFAQFVEQTQYITYAERQGESMILEVIETA GSKETLNFSAIKGAFWKQPYGPNSSIDDKADYPVIHIHYEDAVAYCTAKHKRLPTEAEWEKAARGVEGWRFPWGNEWKSG LSNHAIPLRSHILQVRGLQAIGQSPQSISPYGVHDLLGNVSEWTADWYQPSYYQNNPASQNPQGPELGNSHVKRGGSWAT PPGYLHNSWRIGTPDQTTDRLGFRCAADVN
Sequences:
>Translated_510_residues MTVSPTFAVQLSQLKQTASMSIRVLSQKTAIPEDTLDDWLKGKSRPRNWERVIIVAAALQANYQQANNLLQAIKTSPLEL LPWHQIEYFIQPREQQIGTNVHKQTINPILAMVQTWYEAQIQLLQQEVKADSVDHVEAHNPQLAPTTEVKPNPSDPIAII HTEIHEQTKHQKHINLSLPKKRLLWLFGISSITIMLMGLNLQHAKSNDQSVIDIPSQHNSNLTNSMITIPAGFFIQGSNY ADIAYYAQLCIDYGAACTELEFDDEFDQNGQARQVFLNSYRIDKYEVTNAQFAQFVEQTQYITYAERQGESMILEVIETA GSKETLNFSAIKGAFWKQPYGPNSSIDDKADYPVIHIHYEDAVAYCTAKHKRLPTEAEWEKAARGVEGWRFPWGNEWKSG LSNHAIPLRSHILQVRGLQAIGQSPQSISPYGVHDLLGNVSEWTADWYQPSYYQNNPASQNPQGPELGNSHVKRGGSWAT PPGYLHNSWRIGTPDQTTDRLGFRCAADVN >Mature_509_residues TVSPTFAVQLSQLKQTASMSIRVLSQKTAIPEDTLDDWLKGKSRPRNWERVIIVAAALQANYQQANNLLQAIKTSPLELL PWHQIEYFIQPREQQIGTNVHKQTINPILAMVQTWYEAQIQLLQQEVKADSVDHVEAHNPQLAPTTEVKPNPSDPIAIIH TEIHEQTKHQKHINLSLPKKRLLWLFGISSITIMLMGLNLQHAKSNDQSVIDIPSQHNSNLTNSMITIPAGFFIQGSNYA DIAYYAQLCIDYGAACTELEFDDEFDQNGQARQVFLNSYRIDKYEVTNAQFAQFVEQTQYITYAERQGESMILEVIETAG SKETLNFSAIKGAFWKQPYGPNSSIDDKADYPVIHIHYEDAVAYCTAKHKRLPTEAEWEKAARGVEGWRFPWGNEWKSGL SNHAIPLRSHILQVRGLQAIGQSPQSISPYGVHDLLGNVSEWTADWYQPSYYQNNPASQNPQGPELGNSHVKRGGSWATP PGYLHNSWRIGTPDQTTDRLGFRCAADVN
Specific function: Together with the serine/threonine kinase pknD, may play a role in the specific interactions with host proteins during intracellular growth [H]
COG id: COG1262
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 protein kinase domain [H]
Homologues:
Organism=Homo sapiens, GI38202250, Length=308, Percent_Identity=34.0909090909091, Blast_Score=166, Evalue=7e-41, Organism=Homo sapiens, GI257470975, Length=300, Percent_Identity=34, Blast_Score=151, Evalue=1e-36, Organism=Homo sapiens, GI257470977, Length=303, Percent_Identity=32.3432343234323, Blast_Score=145, Evalue=1e-34, Organism=Homo sapiens, GI194248088, Length=312, Percent_Identity=34.6153846153846, Blast_Score=142, Evalue=6e-34, Organism=Homo sapiens, GI194248087, Length=304, Percent_Identity=33.8815789473684, Blast_Score=129, Evalue=7e-30, Organism=Homo sapiens, GI226437577, Length=206, Percent_Identity=39.8058252427184, Blast_Score=115, Evalue=1e-25, Organism=Homo sapiens, GI194248090, Length=182, Percent_Identity=34.6153846153846, Blast_Score=108, Evalue=1e-23, Organism=Drosophila melanogaster, GI20130397, Length=271, Percent_Identity=35.0553505535055, Blast_Score=137, Evalue=3e-32,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016187 - InterPro: IPR011009 - InterPro: IPR000719 - InterPro: IPR017442 - InterPro: IPR005532 [H]
Pfam domain/function: PF03781 DUF323; PF00069 Pkinase [H]
EC number: =2.7.11.1 [H]
Molecular weight: Translated: 57629; Mature: 57498
Theoretical pI: Translated: 6.33; Mature: 6.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVSPTFAVQLSQLKQTASMSIRVLSQKTAIPEDTLDDWLKGKSRPRNWERVIIVAAALQ CCCCCHHHHHHHHHHHHHHHEEEEEHHHCCCCHHHHHHHHCCCCCCCCCCEEEEEEHHHH ANYQQANNLLQAIKTSPLELLPWHQIEYFIQPREQQIGTNVHKQTINPILAMVQTWYEAQ HHHHHHHHHHHHHHCCCCCCCCHHHHHHEECCCHHHHCCHHHHHHHHHHHHHHHHHHHHH IQLLQQEVKADSVDHVEAHNPQLAPTTEVKPNPSDPIAIIHTEIHEQTKHQKHINLSLPK HHHHHHHHHCCCCCCHHCCCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHCEEECCCCH KRLLWLFGISSITIMLMGLNLQHAKSNDQSVIDIPSQHNSNLTNSMITIPAGFFIQGSNY HHHHHHHHHHHHHHHHHCCCHHHCCCCCCEEEECCCCCCCCCCCCEEEECCCEEEECCCC ADIAYYAQLCIDYGAACTELEFDDEFDQNGQARQVFLNSYRIDKYEVTNAQFAQFVEQTQ CHHHHHHHHHHHHCCCEEECCCCCCCCCCCCHHHHHHHHCCCCEEEECHHHHHHHHHHHH YITYAERQGESMILEVIETAGSKETLNFSAIKGAFWKQPYGPNSSIDDKADYPVIHIHYE HHHHHHHCCHHHHHHHHHHCCCCCEEEHHHHCCHHHCCCCCCCCCCCCCCCCCEEEEEEC DAVAYCTAKHKRLPTEAEWEKAARGVEGWRFPWGNEWKSGLSNHAIPLRSHILQVRGLQA CHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHH IGQSPQSISPYGVHDLLGNVSEWTADWYQPSYYQNNPASQNPQGPELGNSHVKRGGSWAT HCCCCCCCCCCCHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCC PPGYLHNSWRIGTPDQTTDRLGFRCAADVN CCCCCCCCEECCCCCCCHHHCCCEEECCCC >Mature Secondary Structure TVSPTFAVQLSQLKQTASMSIRVLSQKTAIPEDTLDDWLKGKSRPRNWERVIIVAAALQ CCCCHHHHHHHHHHHHHHHEEEEEHHHCCCCHHHHHHHHCCCCCCCCCCEEEEEEHHHH ANYQQANNLLQAIKTSPLELLPWHQIEYFIQPREQQIGTNVHKQTINPILAMVQTWYEAQ HHHHHHHHHHHHHHCCCCCCCCHHHHHHEECCCHHHHCCHHHHHHHHHHHHHHHHHHHHH IQLLQQEVKADSVDHVEAHNPQLAPTTEVKPNPSDPIAIIHTEIHEQTKHQKHINLSLPK HHHHHHHHHCCCCCCHHCCCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHCEEECCCCH KRLLWLFGISSITIMLMGLNLQHAKSNDQSVIDIPSQHNSNLTNSMITIPAGFFIQGSNY HHHHHHHHHHHHHHHHHCCCHHHCCCCCCEEEECCCCCCCCCCCCEEEECCCEEEECCCC ADIAYYAQLCIDYGAACTELEFDDEFDQNGQARQVFLNSYRIDKYEVTNAQFAQFVEQTQ CHHHHHHHHHHHHCCCEEECCCCCCCCCCCCHHHHHHHHCCCCEEEECHHHHHHHHHHHH YITYAERQGESMILEVIETAGSKETLNFSAIKGAFWKQPYGPNSSIDDKADYPVIHIHYE HHHHHHHCCHHHHHHHHHHCCCCCEEEHHHHCCHHHCCCCCCCCCCCCCCCCCEEEEEEC DAVAYCTAKHKRLPTEAEWEKAARGVEGWRFPWGNEWKSGLSNHAIPLRSHILQVRGLQA CHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHH IGQSPQSISPYGVHDLLGNVSEWTADWYQPSYYQNNPASQNPQGPELGNSHVKRGGSWAT HCCCCCCCCCCCHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCC PPGYLHNSWRIGTPDQTTDRLGFRCAADVN CCCCCCCCEECCCCCCCHHHCCCEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10192388; 10684935; 10871362 [H]