| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159898230
Identifier: 159898230
GI number: 159898230
Start: 1983847
End: 1985733
Strand: Reverse
Name: 159898230
Synonym: Haur_1706
Alternate gene names: NA
Gene position: 1985733-1983847 (Counterclockwise)
Preceding gene: 159898232
Following gene: 159898226
Centisome position: 31.29
GC content: 47.43
Gene sequence:
>1887_bases ATGTTTTGGCGCAAAATGAGTTTCATTCTCATCAGCAGTTTATGTTTGATTACCTTAATCTTGCCAACCAAACCAAAGCA AGCTAATGCCAGCAGCGATTTTCAAAATCTGCATTTAATTGTTTCGATCGAATGGCAGCCAGGCCAGCAAGATGCATTAC GTCAAGCAAATGGCAGCACCTGCGCCGCCTTTAGCCAAGCATCGCTGCAAGAGATTTTAACCACGGCCTTGCAAGAAACC AGCCAAACCCTGTATCAAGCCACTGATGGCCAAGTTTGGGTTGAGCAATACTCGGTTTACACTAGCGGCGAACATTGGAA CGATGCCGATATTCGGATTTTGGCCAACAACGATTATCGCCCAACGGCCTTTCTAGGCGGCTTTGAAAAAAGCATTCGCA CGATCGAAACCCACGATGGCAAAGTTCATTTCGTACCAGCAGCAATTATGCTCGGGCGCTTATGGAATGGCATCAACGCC CGTTGTGGCTATTGGTCGGAATTAACTGGCAGCCAAACCATGAGCCACGAATTGGGTCACCATATTTTGGGCTTGCACGA TGGCTATGCGCCCGATGCTGCTAGTGCCAATTATACCTATTGTAGTTCAACCAGTAACGACCTTAGTGCTGAGTTATCGC ATGATCGTTTGAGCCATAACTCGCTGATGTCGTATCACTATAGCGCCAGCAAATTACGTGGCAATGCAGCCCAGCATTAT CATTGCGATAATACACCTCAAACCTTGATGTATGCCATGGATGATTGGGAAACGATTCAAACGCTCTATGGTTTAGTGCC CAGCAATCAGCCAAGCGTGATGGCTCACAATGGCGAGGCCAGCGTTAAATTTATCGCAGCCAATGCCAAGGGCAACACCA GTCTGGTGCAATTTAGCGGATTAGATGATACACAAGCAATGGGTTTTAGCATCAAAGGTGCTCCCAATAAACCCACCCGG ATTATCAATCAAGGCTTGTTGAGTGAGGGCGAGCAAGAAGCATGGTATGGAATTAACTTTAGCGATAGCGATCGGGCAAT TGTGCTGGCCCGCGATTGGAACACCAATTCGGTCACGTCAATCAGCCAAGCGAAGAGCATTCTAAGCCCAACCAGCAGTT TTACCTTAAGCAATCAACGCTGGGTCGCCGATCTACAAGTCAAACCAAAACTTAATAGTACAAGCACGCTACCCGAAATT AATGCGATTGAAATTCAGGGCAAAGAATGTGGCGCAGTTCGAGGCAAAAAGGTTAATCTATCGTTTTGTCCAGCTGGGGG CAACTGTCGCACAGTTGAAAATATTGATATTAGCAGCAGCCGCACGTTTGCTGCAACCTTTGAATTAACCGCTGCTGAAA TTGCCGGCTTAGCCAGTCATCACAACTATTTGTATGCCTATAGCAGCGAATATCAAACACCAGTTGCCACATGGTATCAA ATTGCTGGTGGCTTTGGGCCAGCAACTGCCGAAATCCATGCACCATTGGCCGATGGCAATGTTGGCCTCGATCTGCAAGC TGGCGCAGCAGCAAGCGTCAATGGTTTTACGCTTGAAGTGTATCAACCAGCGCCATTGTGTACCAACTACAACAATTTGC CCAACTATACGATCAAACAATGGCCAACCTTGATTCAGCCCTATATGATTCGTGATAAGCGGCTGTTGGCTTGGTATAGC AATCATCCACCGCTCTATGCCCAATTGAGTTACGATCCAAGTCTGTATCGCAACGGCATTCCAGTCGTGTTGGTCTATAA TCCAGCTAACCCAACCGCTGGCTGGAGTGTTGTGCCGATTGTGGCTCTCAGCCCTGAACTAGGCTATATAACCGTTGATC TACGCAATTACACTAGCCAAGGCCTGGTATACGCCTTAGCCCAATAA
Upstream 100 bases:
>100_bases ACCTCCTACGGAAAGAATTAGGCCGTCGGCACGTCATTAATATGCAACGATTGATTTGGTTGTAACGCTCTTTTCAGAAT TATCTTAAGGAGTCGAGTGT
Downstream 100 bases:
>100_bases ATACAAAAAGGCCGTGGGTTTGCAATTAACCCACGGCCTTGCTAGTTAATCAATTAGCTCTGGGCGTTTTCCAGCCGCTT AGCACGAATCAACGAAGCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 628; Mature: 628
Protein sequence:
>628_residues MFWRKMSFILISSLCLITLILPTKPKQANASSDFQNLHLIVSIEWQPGQQDALRQANGSTCAAFSQASLQEILTTALQET SQTLYQATDGQVWVEQYSVYTSGEHWNDADIRILANNDYRPTAFLGGFEKSIRTIETHDGKVHFVPAAIMLGRLWNGINA RCGYWSELTGSQTMSHELGHHILGLHDGYAPDAASANYTYCSSTSNDLSAELSHDRLSHNSLMSYHYSASKLRGNAAQHY HCDNTPQTLMYAMDDWETIQTLYGLVPSNQPSVMAHNGEASVKFIAANAKGNTSLVQFSGLDDTQAMGFSIKGAPNKPTR IINQGLLSEGEQEAWYGINFSDSDRAIVLARDWNTNSVTSISQAKSILSPTSSFTLSNQRWVADLQVKPKLNSTSTLPEI NAIEIQGKECGAVRGKKVNLSFCPAGGNCRTVENIDISSSRTFAATFELTAAEIAGLASHHNYLYAYSSEYQTPVATWYQ IAGGFGPATAEIHAPLADGNVGLDLQAGAAASVNGFTLEVYQPAPLCTNYNNLPNYTIKQWPTLIQPYMIRDKRLLAWYS NHPPLYAQLSYDPSLYRNGIPVVLVYNPANPTAGWSVVPIVALSPELGYITVDLRNYTSQGLVYALAQ
Sequences:
>Translated_628_residues MFWRKMSFILISSLCLITLILPTKPKQANASSDFQNLHLIVSIEWQPGQQDALRQANGSTCAAFSQASLQEILTTALQET SQTLYQATDGQVWVEQYSVYTSGEHWNDADIRILANNDYRPTAFLGGFEKSIRTIETHDGKVHFVPAAIMLGRLWNGINA RCGYWSELTGSQTMSHELGHHILGLHDGYAPDAASANYTYCSSTSNDLSAELSHDRLSHNSLMSYHYSASKLRGNAAQHY HCDNTPQTLMYAMDDWETIQTLYGLVPSNQPSVMAHNGEASVKFIAANAKGNTSLVQFSGLDDTQAMGFSIKGAPNKPTR IINQGLLSEGEQEAWYGINFSDSDRAIVLARDWNTNSVTSISQAKSILSPTSSFTLSNQRWVADLQVKPKLNSTSTLPEI NAIEIQGKECGAVRGKKVNLSFCPAGGNCRTVENIDISSSRTFAATFELTAAEIAGLASHHNYLYAYSSEYQTPVATWYQ IAGGFGPATAEIHAPLADGNVGLDLQAGAAASVNGFTLEVYQPAPLCTNYNNLPNYTIKQWPTLIQPYMIRDKRLLAWYS NHPPLYAQLSYDPSLYRNGIPVVLVYNPANPTAGWSVVPIVALSPELGYITVDLRNYTSQGLVYALAQ >Mature_628_residues MFWRKMSFILISSLCLITLILPTKPKQANASSDFQNLHLIVSIEWQPGQQDALRQANGSTCAAFSQASLQEILTTALQET SQTLYQATDGQVWVEQYSVYTSGEHWNDADIRILANNDYRPTAFLGGFEKSIRTIETHDGKVHFVPAAIMLGRLWNGINA RCGYWSELTGSQTMSHELGHHILGLHDGYAPDAASANYTYCSSTSNDLSAELSHDRLSHNSLMSYHYSASKLRGNAAQHY HCDNTPQTLMYAMDDWETIQTLYGLVPSNQPSVMAHNGEASVKFIAANAKGNTSLVQFSGLDDTQAMGFSIKGAPNKPTR IINQGLLSEGEQEAWYGINFSDSDRAIVLARDWNTNSVTSISQAKSILSPTSSFTLSNQRWVADLQVKPKLNSTSTLPEI NAIEIQGKECGAVRGKKVNLSFCPAGGNCRTVENIDISSSRTFAATFELTAAEIAGLASHHNYLYAYSSEYQTPVATWYQ IAGGFGPATAEIHAPLADGNVGLDLQAGAAASVNGFTLEVYQPAPLCTNYNNLPNYTIKQWPTLIQPYMIRDKRLLAWYS NHPPLYAQLSYDPSLYRNGIPVVLVYNPANPTAGWSVVPIVALSPELGYITVDLRNYTSQGLVYALAQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 68917; Mature: 68917
Theoretical pI: Translated: 6.13; Mature: 6.13
Prosite motif: PS00142 ZINC_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFWRKMSFILISSLCLITLILPTKPKQANASSDFQNLHLIVSIEWQPGQQDALRQANGST CCHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCEEEEEEEEEECCCHHHHHHHCCCCE CAAFSQASLQEILTTALQETSQTLYQATDGQVWVEQYSVYTSGEHWNDADIRILANNDYR EEHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEECCCCCCCCCEEEEECCCCC PTAFLGGFEKSIRTIETHDGKVHFVPAAIMLGRLWNGINARCGYWSELTGSQTMSHELGH CCCEECCHHHHCEEEECCCCEEEEEHHHHHHHHHHCCCCCCCCCHHHCCCCHHHHHHHCC HILGLHDGYAPDAASANYTYCSSTSNDLSAELSHDRLSHNSLMSYHYSASKLRGNAAQHY CEEECCCCCCCCCCCCCEEEECCCCCCCCHHHCHHHCCCCCCEEEEECHHHHCCCCCCEE HCDNTPQTLMYAMDDWETIQTLYGLVPSNQPSVMAHNGEASVKFIAANAKGNTSLVQFSG ECCCCCCEEEEECCCHHHHHHHHHCCCCCCCCEEEECCCCEEEEEEECCCCCCEEEEEEC LDDTQAMGFSIKGAPNKPTRIINQGLLSEGEQEAWYGINFSDSDRAIVLARDWNTNSVTS CCCCHHCCEEEECCCCCCHHHHHHHHHCCCCCCCEEECCCCCCCCEEEEEECCCCCCCCH ISQAKSILSPTSSFTLSNQRWVADLQVKPKLNSTSTLPEINAIEIQGKECGAVRGKKVNL HHHHHHHHCCCCCEEECCCEEEEEEEEECCCCCCCCCCCCEEEEECCCCCCCCCCCEEEE SFCPAGGNCRTVENIDISSSRTFAATFELTAAEIAGLASHHNYLYAYSSEYQTPVATWYQ EECCCCCCCEEEEECCCCCCCEEEEEEEEHHHHHHHHHHCCCEEEEECCCCCCHHHHHHH IAGGFGPATAEIHAPLADGNVGLDLQAGAAASVNGFTLEVYQPAPLCTNYNNLPNYTIKQ HHCCCCCCCEEEEEEECCCCCCEEEECCCCCCCCCEEEEEECCCCCCCCCCCCCCCCHHH WPTLIQPYMIRDKRLLAWYSNHPPLYAQLSYDPSLYRNGIPVVLVYNPANPTAGWSVVPI CHHHHCCCEECCCEEEEEECCCCCEEEEECCCHHHHHCCCCEEEEECCCCCCCCCEEEEE VALSPELGYITVDLRNYTSQGLVYALAQ EEECCCCCEEEEEECCCCCCCEEEEECC >Mature Secondary Structure MFWRKMSFILISSLCLITLILPTKPKQANASSDFQNLHLIVSIEWQPGQQDALRQANGST CCHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCEEEEEEEEEECCCHHHHHHHCCCCE CAAFSQASLQEILTTALQETSQTLYQATDGQVWVEQYSVYTSGEHWNDADIRILANNDYR EEHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEECCCCCCCCCEEEEECCCCC PTAFLGGFEKSIRTIETHDGKVHFVPAAIMLGRLWNGINARCGYWSELTGSQTMSHELGH CCCEECCHHHHCEEEECCCCEEEEEHHHHHHHHHHCCCCCCCCCHHHCCCCHHHHHHHCC HILGLHDGYAPDAASANYTYCSSTSNDLSAELSHDRLSHNSLMSYHYSASKLRGNAAQHY CEEECCCCCCCCCCCCCEEEECCCCCCCCHHHCHHHCCCCCCEEEEECHHHHCCCCCCEE HCDNTPQTLMYAMDDWETIQTLYGLVPSNQPSVMAHNGEASVKFIAANAKGNTSLVQFSG ECCCCCCEEEEECCCHHHHHHHHHCCCCCCCCEEEECCCCEEEEEEECCCCCCEEEEEEC LDDTQAMGFSIKGAPNKPTRIINQGLLSEGEQEAWYGINFSDSDRAIVLARDWNTNSVTS CCCCHHCCEEEECCCCCCHHHHHHHHHCCCCCCCEEECCCCCCCCEEEEEECCCCCCCCH ISQAKSILSPTSSFTLSNQRWVADLQVKPKLNSTSTLPEINAIEIQGKECGAVRGKKVNL HHHHHHHHCCCCCEEECCCEEEEEEEEECCCCCCCCCCCCEEEEECCCCCCCCCCCEEEE SFCPAGGNCRTVENIDISSSRTFAATFELTAAEIAGLASHHNYLYAYSSEYQTPVATWYQ EECCCCCCCEEEEECCCCCCCEEEEEEEEHHHHHHHHHHCCCEEEEECCCCCCHHHHHHH IAGGFGPATAEIHAPLADGNVGLDLQAGAAASVNGFTLEVYQPAPLCTNYNNLPNYTIKQ HHCCCCCCCEEEEEEECCCCCCEEEECCCCCCCCCEEEEEECCCCCCCCCCCCCCCCHHH WPTLIQPYMIRDKRLLAWYSNHPPLYAQLSYDPSLYRNGIPVVLVYNPANPTAGWSVVPI CHHHHCCCEECCCEEEEEECCCCCEEEEECCCHHHHHCCCCEEEEECCCCCCCCCEEEEE VALSPELGYITVDLRNYTSQGLVYALAQ EEECCCCCEEEEEECCCCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA