Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
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Accession | NC_009972 |
Length | 6,346,587 |
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The map label for this gene is 159898181
Identifier: 159898181
GI number: 159898181
Start: 1925049
End: 1925921
Strand: Reverse
Name: 159898181
Synonym: Haur_1657
Alternate gene names: NA
Gene position: 1925921-1925049 (Counterclockwise)
Preceding gene: 159898182
Following gene: 159898180
Centisome position: 30.35
GC content: 51.09
Gene sequence:
>873_bases GTGACTGCCTATACAATTGAACATCAGCTGGATAATGGCATCGAACGGATTATCTATACGCCTCAAGAACAACGTTTCCA AACTCCAATTTTAATGGGCCATGGCATGTGGCATGGAGCATGGTGTTGGCAACCATGGCAAGCATTGCTGGCCGAATGGG GTTGGCAAAGCATCGCCTTCAGTCAGCCAGGCCATGGTCAATCGCCGGCCCAACGTGCCAATCGCTGGAATACACTGGGC TATTATTACCGCACACTCAAAGCCGAAATCGAGCGTTTGCCAATCAAGCCAATCTACATGGGCCATAGTATGGGTGGCGC TTTAGGCCAGTGGCATCTTGCCAAAGGCGGCGATGATTTGCCCGCAATGGTTTTGGTGGCACCTTGGTTGAGCCATAGCA TGCGCCCAGTTTTTGCCAATGCCCAGAAACTTGACCCTTGGGGCACGCTTTTGTGCTGGCTTTCGCTCTCGGCAACGCCC ACGGTTCGCACGCCCAAACGCGCAGCCTTTTGGTTTCTTAGCGAAGATGCGACCATTAAACCCAAACAGTTGCATAGCCA GCTTGCGCCTGAATCGGCATTGGTGTTGTTACAATATCGTTGGCCCTTGTGGCGACCAGCCAAACAGGTCAAAACACCGT TGTTATGGCTGGCCGCCGAGCAGGATCGTTGCATTCCCGAACAATATTCGCGACCTTCAGCTGCCCATTACAATGCCGAA TATTGGGTCATTCCCAAGGCCAATCACGATTTGATGTTCGAGGCATCGTATCGCGAAACCGCCGAATTGATTCATAATTG GTTACAATCTGTCGTTACAGGAACCCAGCATGATCAGCATTCAAGCCTACAATTTCAATCAAGCGCAAGCTAA
Upstream 100 bases:
>100_bases TTTTGGCCTCGCCAGCAGCTAGTTTTATCACTGGAGCTGAGTATATTATTGATGGTGGGATTACCAGCATGTAGCTTAAT TTGCGAAGAAAGAGGCCTGT
Downstream 100 bases:
>100_bases AATCGACCAATTGTGCCATTTATTAATTGATAGCGTTGGACAAGGCGCATCGATCGGCTTTCTGCCACCGCTGAGCCAAG CTGAAGTAACCGCCTATTGG
Product: alpha/beta hydrolase fold-domain containing protein
Products: NA
Alternate protein names: Alpha/Beta Hydrolase Fold Protein; Alpha/Beta Hydrolase Fold-Domain Containing Protein; Hydrolase Or Acyltransferase; Acetone-Cyanohydrin Lyase; Hydrolase; Alpha/Beta Hydrolase Fold-Containing Protein
Number of amino acids: Translated: 290; Mature: 289
Protein sequence:
>290_residues MTAYTIEHQLDNGIERIIYTPQEQRFQTPILMGHGMWHGAWCWQPWQALLAEWGWQSIAFSQPGHGQSPAQRANRWNTLG YYYRTLKAEIERLPIKPIYMGHSMGGALGQWHLAKGGDDLPAMVLVAPWLSHSMRPVFANAQKLDPWGTLLCWLSLSATP TVRTPKRAAFWFLSEDATIKPKQLHSQLAPESALVLLQYRWPLWRPAKQVKTPLLWLAAEQDRCIPEQYSRPSAAHYNAE YWVIPKANHDLMFEASYRETAELIHNWLQSVVTGTQHDQHSSLQFQSSAS
Sequences:
>Translated_290_residues MTAYTIEHQLDNGIERIIYTPQEQRFQTPILMGHGMWHGAWCWQPWQALLAEWGWQSIAFSQPGHGQSPAQRANRWNTLG YYYRTLKAEIERLPIKPIYMGHSMGGALGQWHLAKGGDDLPAMVLVAPWLSHSMRPVFANAQKLDPWGTLLCWLSLSATP TVRTPKRAAFWFLSEDATIKPKQLHSQLAPESALVLLQYRWPLWRPAKQVKTPLLWLAAEQDRCIPEQYSRPSAAHYNAE YWVIPKANHDLMFEASYRETAELIHNWLQSVVTGTQHDQHSSLQFQSSAS >Mature_289_residues TAYTIEHQLDNGIERIIYTPQEQRFQTPILMGHGMWHGAWCWQPWQALLAEWGWQSIAFSQPGHGQSPAQRANRWNTLGY YYRTLKAEIERLPIKPIYMGHSMGGALGQWHLAKGGDDLPAMVLVAPWLSHSMRPVFANAQKLDPWGTLLCWLSLSATPT VRTPKRAAFWFLSEDATIKPKQLHSQLAPESALVLLQYRWPLWRPAKQVKTPLLWLAAEQDRCIPEQYSRPSAAHYNAEY WVIPKANHDLMFEASYRETAELIHNWLQSVVTGTQHDQHSSLQFQSSAS
Specific function: Unknown
COG id: COG0596
COG function: function code R; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33307; Mature: 33176
Theoretical pI: Translated: 8.46; Mature: 8.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAYTIEHQLDNGIERIIYTPQEQRFQTPILMGHGMWHGAWCWQPWQALLAEWGWQSIAF CCEEEEHHHHCCCCHHEEECCHHHHHCCCEEEECCCCCCCCHHHHHHHHHHHCCCCEEEE SQPGHGQSPAQRANRWNTLGYYYRTLKAEIERLPIKPIYMGHSMGGALGQWHLAKGGDDL CCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCEEEECCCCCCC PAMVLVAPWLSHSMRPVFANAQKLDPWGTLLCWLSLSATPTVRTPKRAAFWFLSEDATIK CHHHHHHHHHHCCCCCHHCCCCCCCHHHHHHHEEECCCCCCCCCCCCEEEEEECCCCCCC PKQLHSQLAPESALVLLQYRWPLWRPAKQVKTPLLWLAAEQDRCIPEQYSRPSAAHYNAE HHHHHHHHCCCCEEEEEEECCCCCCCHHHHCCCEEEEECCCCCCCHHHHCCCCCCCCCCE YWVIPKANHDLMFEASYRETAELIHNWLQSVVTGTQHDQHSSLQFQSSAS EEEEECCCCCEEEECHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC >Mature Secondary Structure TAYTIEHQLDNGIERIIYTPQEQRFQTPILMGHGMWHGAWCWQPWQALLAEWGWQSIAF CEEEEHHHHCCCCHHEEECCHHHHHCCCEEEECCCCCCCCHHHHHHHHHHHCCCCEEEE SQPGHGQSPAQRANRWNTLGYYYRTLKAEIERLPIKPIYMGHSMGGALGQWHLAKGGDDL CCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCEEEECCCCCCC PAMVLVAPWLSHSMRPVFANAQKLDPWGTLLCWLSLSATPTVRTPKRAAFWFLSEDATIK CHHHHHHHHHHCCCCCHHCCCCCCCHHHHHHHEEECCCCCCCCCCCCEEEEEECCCCCCC PKQLHSQLAPESALVLLQYRWPLWRPAKQVKTPLLWLAAEQDRCIPEQYSRPSAAHYNAE HHHHHHHHCCCCEEEEEEECCCCCCCHHHHCCCEEEEECCCCCCCHHHHCCCCCCCCCCE YWVIPKANHDLMFEASYRETAELIHNWLQSVVTGTQHDQHSSLQFQSSAS EEEEECCCCCEEEECHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA