| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159898178
Identifier: 159898178
GI number: 159898178
Start: 1921427
End: 1922455
Strand: Reverse
Name: 159898178
Synonym: Haur_1654
Alternate gene names: NA
Gene position: 1922455-1921427 (Counterclockwise)
Preceding gene: 159898179
Following gene: 159898177
Centisome position: 30.29
GC content: 50.73
Gene sequence:
>1029_bases ATGAGTCGTCGCAAAAAACGCCCAACCTCTGCTCAACCCGTAGCCAAAGCCAGCCAGATAGCTAGCACTAAAGCGACCAA AGCGCAACATCGCCGCTCGTTATTGGCAGTTGGCAGCGTCCTTGCGGTGCTCAGCGTTTTAGGTTTAGGTTTGTGGTGGG TAAATCGTAGTTCAGCGACTGCCAGCAATTTTCCAGTTGGCGAAGTAACCTCGTGCAAGCAAATCCCGCCCTTTGCCCAA GCTCAAGGATTCGGGGTCAATGCGGTTTTAGATACTCAAGCGCGGCGCGTGCGTGGCATGGTAATGTACGATCTGACCAG CGATGGTCAAGAGGCCAGCCAACCAGCACCCTATCAACACCCTTCTTGGTCAAAAGCAGGCTACTTGAGTTCACCAATTT TGGATCGCGATGGGGCGATTTACGTTGGCGCAGTGCCGTGGGTCAGCATTTTGTATAATCCCCCAGCAGCAGCCAACAAA GTCTATCGGATCGATCCACGCACTGCCGAATTGAGCGAATTGCTCGATTTGCCAACAGCTGCACCCGCCAACAATACCAA TCCCTATGGCATTTTGGCGCTCAACTACGATTGCAACACCCATAGTTTGTATGTTTCATCGGTGCTTGGCTCGACCAAAG ATCAACAATTTGGGCGGATTTTTCGCGTCGATTTAGCCACGAATAAAGCCAGTATCGTAATTGATGGCGTTGATAGCTTT GGCATTGGAGTGTATAACGGTAACACTGGCAAGCGCTTGTATTATGCATTGGCGCGGCAGCCGCAAATCTACTCAATTGC CTTAGATAACCAAGGCAACCCAACTGGCCAGCCGCGCCAAGAGATCGATTTTAGCGGTCAAGGCTATCATGGTGATGAGC GTGGACGACGGATTAGCTTTGGCGATGCCACCATGCAAGTGCGCATCGTTCAATTCGATTACACCCTAACTGCGGTTACC AACCCAAATGAAACAACCTTGAGCTACCGTTACAACCCACAAACTGATAGCTGGCAAGCTGAACCATAA
Upstream 100 bases:
>100_bases ATATTGCTGGGCCGAATCGGTGTTGCGACGTGGCGTGTACATACCAGAGGAATATCCATGTTGGTCGGGGCCGCTCTTTC AGCCAGTACGAGGCAAATAA
Downstream 100 bases:
>100_bases CCAAGGAGCCTATACGACCGTAGTTCGCAGGTCGCGATTGACAGACCCAAAATCCCATAAACGAATCCGCCTAAAGTACC GTTTAAAGTCATGCAGAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 342; Mature: 341
Protein sequence:
>342_residues MSRRKKRPTSAQPVAKASQIASTKATKAQHRRSLLAVGSVLAVLSVLGLGLWWVNRSSATASNFPVGEVTSCKQIPPFAQ AQGFGVNAVLDTQARRVRGMVMYDLTSDGQEASQPAPYQHPSWSKAGYLSSPILDRDGAIYVGAVPWVSILYNPPAAANK VYRIDPRTAELSELLDLPTAAPANNTNPYGILALNYDCNTHSLYVSSVLGSTKDQQFGRIFRVDLATNKASIVIDGVDSF GIGVYNGNTGKRLYYALARQPQIYSIALDNQGNPTGQPRQEIDFSGQGYHGDERGRRISFGDATMQVRIVQFDYTLTAVT NPNETTLSYRYNPQTDSWQAEP
Sequences:
>Translated_342_residues MSRRKKRPTSAQPVAKASQIASTKATKAQHRRSLLAVGSVLAVLSVLGLGLWWVNRSSATASNFPVGEVTSCKQIPPFAQ AQGFGVNAVLDTQARRVRGMVMYDLTSDGQEASQPAPYQHPSWSKAGYLSSPILDRDGAIYVGAVPWVSILYNPPAAANK VYRIDPRTAELSELLDLPTAAPANNTNPYGILALNYDCNTHSLYVSSVLGSTKDQQFGRIFRVDLATNKASIVIDGVDSF GIGVYNGNTGKRLYYALARQPQIYSIALDNQGNPTGQPRQEIDFSGQGYHGDERGRRISFGDATMQVRIVQFDYTLTAVT NPNETTLSYRYNPQTDSWQAEP >Mature_341_residues SRRKKRPTSAQPVAKASQIASTKATKAQHRRSLLAVGSVLAVLSVLGLGLWWVNRSSATASNFPVGEVTSCKQIPPFAQA QGFGVNAVLDTQARRVRGMVMYDLTSDGQEASQPAPYQHPSWSKAGYLSSPILDRDGAIYVGAVPWVSILYNPPAAANKV YRIDPRTAELSELLDLPTAAPANNTNPYGILALNYDCNTHSLYVSSVLGSTKDQQFGRIFRVDLATNKASIVIDGVDSFG IGVYNGNTGKRLYYALARQPQIYSIALDNQGNPTGQPRQEIDFSGQGYHGDERGRRISFGDATMQVRIVQFDYTLTAVTN PNETTLSYRYNPQTDSWQAEP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37326; Mature: 37195
Theoretical pI: Translated: 9.54; Mature: 9.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRRKKRPTSAQPVAKASQIASTKATKAQHRRSLLAVGSVLAVLSVLGLGLWWVNRSSAT CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCC ASNFPVGEVTSCKQIPPFAQAQGFGVNAVLDTQARRVRGMVMYDLTSDGQEASQPAPYQH CCCCCCCCCCCCCCCCCCHHHCCCCCEEEECCHHHHHCCEEEEEECCCCCCCCCCCCCCC PSWSKAGYLSSPILDRDGAIYVGAVPWVSILYNPPAAANKVYRIDPRTAELSELLDLPTA CCCCCCCCCCCCCCCCCCCEEEECCCEEEEEECCCHHCCCEEEECCCHHHHHHHHCCCCC APANNTNPYGILALNYDCNTHSLYVSSVLGSTKDQQFGRIFRVDLATNKASIVIDGVDSF CCCCCCCCEEEEEEEECCCCCEEEHHHHHCCCCCCCCCEEEEEEEECCCEEEEEECCCCC GIGVYNGNTGKRLYYALARQPQIYSIALDNQGNPTGQPRQEIDFSGQGYHGDERGRRISF EEEEEECCCCCEEEEEECCCCEEEEEEECCCCCCCCCCHHHCCCCCCCCCCHHCCCEEEE GDATMQVRIVQFDYTLTAVTNPNETTLSYRYNPQTDSWQAEP CCCEEEEEEEEEEEEEEEEECCCCEEEEEEECCCCCCCCCCC >Mature Secondary Structure SRRKKRPTSAQPVAKASQIASTKATKAQHRRSLLAVGSVLAVLSVLGLGLWWVNRSSAT CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCC ASNFPVGEVTSCKQIPPFAQAQGFGVNAVLDTQARRVRGMVMYDLTSDGQEASQPAPYQH CCCCCCCCCCCCCCCCCCHHHCCCCCEEEECCHHHHHCCEEEEEECCCCCCCCCCCCCCC PSWSKAGYLSSPILDRDGAIYVGAVPWVSILYNPPAAANKVYRIDPRTAELSELLDLPTA CCCCCCCCCCCCCCCCCCCEEEECCCEEEEEECCCHHCCCEEEECCCHHHHHHHHCCCCC APANNTNPYGILALNYDCNTHSLYVSSVLGSTKDQQFGRIFRVDLATNKASIVIDGVDSF CCCCCCCCEEEEEEEECCCCCEEEHHHHHCCCCCCCCCEEEEEEEECCCEEEEEECCCCC GIGVYNGNTGKRLYYALARQPQIYSIALDNQGNPTGQPRQEIDFSGQGYHGDERGRRISF EEEEEECCCCCEEEEEECCCCEEEEEEECCCCCCCCCCHHHCCCCCCCCCCHHCCCEEEE GDATMQVRIVQFDYTLTAVTNPNETTLSYRYNPQTDSWQAEP CCCEEEEEEEEEEEEEEEEECCCCEEEEEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA