Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is 159898179

Identifier: 159898179

GI number: 159898179

Start: 1922456

End: 1924207

Strand: Reverse

Name: 159898179

Synonym: Haur_1655

Alternate gene names: NA

Gene position: 1924207-1922456 (Counterclockwise)

Preceding gene: 159898180

Following gene: 159898178

Centisome position: 30.32

GC content: 51.54

Gene sequence:

>1752_bases
ATGCAACGGAGCGTTCTCTATCGATTGTTGTTATTAATGATGCTCAGCGCTTGTGGCACAACCCCAGCCCAGCATCCAAC
CACCACCAGCGTTGCTGCTGAAACTCCAGCAATTCTTGCCGCCGAAATTACGCCTGAAGCCCAAAATTATCCTTTATTGA
CCGCCTATCAACAAGTAATCAACCAGGCTTTAACCGCAACGCCACCAGTCTTGACCTTGGGCAGTCTCGATTCACAACAA
GCCATGGCGCAGATTGTCGCGCTCAACGAGCCGAAATTACAAAGTCAATTCGTTGATCAAACTGGCACGCCCTTTCGGAA
CGAGGTATTTGGGGTTGTGCCAGTCCGCGAAAGCGATATTATTGAAGCAACCGCTGCCTGCTTGCAAGTCAGTTGCTATC
GCGTCGAGGTCTATAATTTCGCCTTGAATTTGACCCTTGCCATCACCGTTGATGTTTCCAATCAAAAAGTGATTGTGGTC
GAACGCCTCGCCAACAGCCAGCCCGATATTCCCGAATACCTAACCGCAGTTGCCCGCGAAATTGCCAGCAATGCGGCTGA
AGTCGAGCAAGCTCTCGGCTACAAACCAACCTCGGATCAAGCGGTGATGGCCAATACCAAAACTGCCTTGAATGCGACCC
GCTGCGAACGTTCAATCCATTTGTGTGTTGCGCCAACCTTTGTTGCAGGCGAACGGGCACTCTGGGCAATTGTCGATTTG
ACCGATACCCGCTTGGTTGGGGTGCGCTGGACAAATGTTGGAGCAACTGGCCCTGCCGTCACCGAAAAGGGCATGCAAAA
CGAGGCCGTACTGAAATATTGCGACCACACCACCCGCCTAGAGCGCGATGGTTGGGCCTTTGATTATATGCTGACTTCAT
CCGATGGCCTGCGAATTTCCGATGTGAGCTATCAAGGCAAGCCCTTATTCAAAAGCGCCAAGTTGGTCGATTGGCATGTT
AACTATAGCGAACGCGATGGCTTTGGCTATAGCGATGCCGTCGGTTGTCCTTATTTTTCGCAAGCGGCAGTGATTGCGGT
CGAACCACCGATGATCGGTGAGATTCGCGAGAATGATCAGGTGGTCGGCTTTCAACTAGTGCAGGAATTTTGGTCGGAGC
TTTGGCCTGAGCCATGCAATTATTATTATGAACAGGCCTTTTATTTCTATTTTGATGGGCGTTTTCGGCCAGCGATTGCC
AGTGTTGGCCGTGGTTGCGGCGATGATGGAACCTATCGACCTGTTACCCGCATCAGTTTGGCCGAAACTGGCACGATCAG
CGCCTGGAATGGCACGCAGTGGCAAGCGTGGCAAACAGAGCAATTGCAAGGAGCCGACACGCGCCAAATCAACCCTGATG
GCGCGGAATATCGCCTCGATTTGGCCAATGGCGAGAGTTATACGATTGCAACAGGTCGTGGCCAATTTGATGATGGCGGG
CGAGGCGACCAAGCCTATGTGTATGCAACGCTTGATCATCCTGAACGCGACGAAGGCGAAAGCGATATGGTGACGATTGG
TCCATGCTGCAATACTGATGCCAACCAAGGCCCAGAACAATTTATCGATAATCCGCCCGAAAGCATTAGCAACCAACATA
TTGTTCTATGGTACGTAGCCCAACTCAAAAACGATGATACGCCTGGTAGCCAATATTGCTGGGCCGAATCGGTGTTGCGA
CGTGGCGTGTACATACCAGAGGAATATCCATGTTGGTCGGGGCCGCTCTTTCAGCCAGTACGAGGCAAATAA

Upstream 100 bases:

>100_bases
CTTTTATAATGCATTCACGCTCTTGCTTCATTATTGCCGCTTATTTCGCTCAATCAAATCATTATGTTCAGTTAATCTCG
GTGGATGTGAAGGAGTTTCT

Downstream 100 bases:

>100_bases
ATGAGTCGTCGCAAAAAACGCCCAACCTCTGCTCAACCCGTAGCCAAAGCCAGCCAGATAGCTAGCACTAAAGCGACCAA
AGCGCAACATCGCCGCTCGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 583; Mature: 583

Protein sequence:

>583_residues
MQRSVLYRLLLLMMLSACGTTPAQHPTTTSVAAETPAILAAEITPEAQNYPLLTAYQQVINQALTATPPVLTLGSLDSQQ
AMAQIVALNEPKLQSQFVDQTGTPFRNEVFGVVPVRESDIIEATAACLQVSCYRVEVYNFALNLTLAITVDVSNQKVIVV
ERLANSQPDIPEYLTAVAREIASNAAEVEQALGYKPTSDQAVMANTKTALNATRCERSIHLCVAPTFVAGERALWAIVDL
TDTRLVGVRWTNVGATGPAVTEKGMQNEAVLKYCDHTTRLERDGWAFDYMLTSSDGLRISDVSYQGKPLFKSAKLVDWHV
NYSERDGFGYSDAVGCPYFSQAAVIAVEPPMIGEIRENDQVVGFQLVQEFWSELWPEPCNYYYEQAFYFYFDGRFRPAIA
SVGRGCGDDGTYRPVTRISLAETGTISAWNGTQWQAWQTEQLQGADTRQINPDGAEYRLDLANGESYTIATGRGQFDDGG
RGDQAYVYATLDHPERDEGESDMVTIGPCCNTDANQGPEQFIDNPPESISNQHIVLWYVAQLKNDDTPGSQYCWAESVLR
RGVYIPEEYPCWSGPLFQPVRGK

Sequences:

>Translated_583_residues
MQRSVLYRLLLLMMLSACGTTPAQHPTTTSVAAETPAILAAEITPEAQNYPLLTAYQQVINQALTATPPVLTLGSLDSQQ
AMAQIVALNEPKLQSQFVDQTGTPFRNEVFGVVPVRESDIIEATAACLQVSCYRVEVYNFALNLTLAITVDVSNQKVIVV
ERLANSQPDIPEYLTAVAREIASNAAEVEQALGYKPTSDQAVMANTKTALNATRCERSIHLCVAPTFVAGERALWAIVDL
TDTRLVGVRWTNVGATGPAVTEKGMQNEAVLKYCDHTTRLERDGWAFDYMLTSSDGLRISDVSYQGKPLFKSAKLVDWHV
NYSERDGFGYSDAVGCPYFSQAAVIAVEPPMIGEIRENDQVVGFQLVQEFWSELWPEPCNYYYEQAFYFYFDGRFRPAIA
SVGRGCGDDGTYRPVTRISLAETGTISAWNGTQWQAWQTEQLQGADTRQINPDGAEYRLDLANGESYTIATGRGQFDDGG
RGDQAYVYATLDHPERDEGESDMVTIGPCCNTDANQGPEQFIDNPPESISNQHIVLWYVAQLKNDDTPGSQYCWAESVLR
RGVYIPEEYPCWSGPLFQPVRGK
>Mature_583_residues
MQRSVLYRLLLLMMLSACGTTPAQHPTTTSVAAETPAILAAEITPEAQNYPLLTAYQQVINQALTATPPVLTLGSLDSQQ
AMAQIVALNEPKLQSQFVDQTGTPFRNEVFGVVPVRESDIIEATAACLQVSCYRVEVYNFALNLTLAITVDVSNQKVIVV
ERLANSQPDIPEYLTAVAREIASNAAEVEQALGYKPTSDQAVMANTKTALNATRCERSIHLCVAPTFVAGERALWAIVDL
TDTRLVGVRWTNVGATGPAVTEKGMQNEAVLKYCDHTTRLERDGWAFDYMLTSSDGLRISDVSYQGKPLFKSAKLVDWHV
NYSERDGFGYSDAVGCPYFSQAAVIAVEPPMIGEIRENDQVVGFQLVQEFWSELWPEPCNYYYEQAFYFYFDGRFRPAIA
SVGRGCGDDGTYRPVTRISLAETGTISAWNGTQWQAWQTEQLQGADTRQINPDGAEYRLDLANGESYTIATGRGQFDDGG
RGDQAYVYATLDHPERDEGESDMVTIGPCCNTDANQGPEQFIDNPPESISNQHIVLWYVAQLKNDDTPGSQYCWAESVLR
RGVYIPEEYPCWSGPLFQPVRGK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 64481; Mature: 64481

Theoretical pI: Translated: 4.31; Mature: 4.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQRSVLYRLLLLMMLSACGTTPAQHPTTTSVAAETPAILAAEITPEAQNYPLLTAYQQVI
CCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHH
NQALTATPPVLTLGSLDSQQAMAQIVALNEPKLQSQFVDQTGTPFRNEVFGVVPVRESDI
HHHHHCCCCEEEECCCCHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCEEEEEECCCCHH
IEATAACLQVSCYRVEVYNFALNLTLAITVDVSNQKVIVVERLANSQPDIPEYLTAVARE
HHHHHHHHHHEEEEEEEEEEEEEEEEEEEEEECCCEEEEEEECCCCCCCHHHHHHHHHHH
IASNAAEVEQALGYKPTSDQAVMANTKTALNATRCERSIHLCVAPTFVAGERALWAIVDL
HHHHHHHHHHHHCCCCCCCCEEEECCHHHHHHHHHCCEEEEEEECEEECCCCEEEEEEEE
TDTRLVGVRWTNVGATGPAVTEKGMQNEAVLKYCDHTTRLERDGWAFDYMLTSSDGLRIS
CCCEEEEEEEECCCCCCCHHHHCCCCCHHHHHHHCCHHCCCCCCCEEEEEEECCCCCEEE
DVSYQGKPLFKSAKLVDWHVNYSERDGFGYSDAVGCPYFSQAAVIAVEPPMIGEIRENDQ
ECCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCC
VVGFQLVQEFWSELWPEPCNYYYEQAFYFYFDGRFRPAIASVGRGCGDDGTYRPVTRISL
CHHHHHHHHHHHHHCCCHHHHHHHCEEEEEECCCCCHHHHHHCCCCCCCCCCCCEEEEEE
AETGTISAWNGTQWQAWQTEQLQGADTRQINPDGAEYRLDLANGESYTIATGRGQFDDGG
ECCCEEEECCCCCCCEECHHHHCCCCCCCCCCCCCEEEEEECCCCEEEEEECCCCCCCCC
RGDQAYVYATLDHPERDEGESDMVTIGPCCNTDANQGPEQFIDNPPESISNQHIVLWYVA
CCCEEEEEEECCCCCCCCCCCCEEEECCCCCCCCCCCCHHHHCCCCHHHCCCEEEEEEEE
QLKNDDTPGSQYCWAESVLRRGVYIPEEYPCWSGPLFQPVRGK
ECCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MQRSVLYRLLLLMMLSACGTTPAQHPTTTSVAAETPAILAAEITPEAQNYPLLTAYQQVI
CCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHH
NQALTATPPVLTLGSLDSQQAMAQIVALNEPKLQSQFVDQTGTPFRNEVFGVVPVRESDI
HHHHHCCCCEEEECCCCHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCEEEEEECCCCHH
IEATAACLQVSCYRVEVYNFALNLTLAITVDVSNQKVIVVERLANSQPDIPEYLTAVARE
HHHHHHHHHHEEEEEEEEEEEEEEEEEEEEEECCCEEEEEEECCCCCCCHHHHHHHHHHH
IASNAAEVEQALGYKPTSDQAVMANTKTALNATRCERSIHLCVAPTFVAGERALWAIVDL
HHHHHHHHHHHHCCCCCCCCEEEECCHHHHHHHHHCCEEEEEEECEEECCCCEEEEEEEE
TDTRLVGVRWTNVGATGPAVTEKGMQNEAVLKYCDHTTRLERDGWAFDYMLTSSDGLRIS
CCCEEEEEEEECCCCCCCHHHHCCCCCHHHHHHHCCHHCCCCCCCEEEEEEECCCCCEEE
DVSYQGKPLFKSAKLVDWHVNYSERDGFGYSDAVGCPYFSQAAVIAVEPPMIGEIRENDQ
ECCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCC
VVGFQLVQEFWSELWPEPCNYYYEQAFYFYFDGRFRPAIASVGRGCGDDGTYRPVTRISL
CHHHHHHHHHHHHHCCCHHHHHHHCEEEEEECCCCCHHHHHHCCCCCCCCCCCCEEEEEE
AETGTISAWNGTQWQAWQTEQLQGADTRQINPDGAEYRLDLANGESYTIATGRGQFDDGG
ECCCEEEECCCCCCCEECHHHHCCCCCCCCCCCCCEEEEEECCCCEEEEEECCCCCCCCC
RGDQAYVYATLDHPERDEGESDMVTIGPCCNTDANQGPEQFIDNPPESISNQHIVLWYVA
CCCEEEEEEECCCCCCCCCCCCEEEECCCCCCCCCCCCHHHHCCCCHHHCCCEEEEEEEE
QLKNDDTPGSQYCWAESVLRRGVYIPEEYPCWSGPLFQPVRGK
ECCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA