The gene/protein map for NC_009972 is currently unavailable.
Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

Click here to switch to the map view.

The map label for this gene is 159898057

Identifier: 159898057

GI number: 159898057

Start: 1786001

End: 1786636

Strand: Reverse

Name: 159898057

Synonym: Haur_1532

Alternate gene names: NA

Gene position: 1786636-1786001 (Counterclockwise)

Preceding gene: 159898058

Following gene: 159898047

Centisome position: 28.15

GC content: 49.53

Gene sequence:

>636_bases
ATGAACACGCCACTTCCGACCGCATCTCACGAGATTATGCGTCAACGTCTTGTTGAGTATGCCCATGCTGTTGCGCTCGG
TGCGCCACTTGATGCCGCGCTCCAAGTCGTCGCCGACCATGTTGAAACATGCGCAAGCTGTCGCGCCGAGTTGTTTGATG
CCTTGGATGCGAGTTATGCGTTGTACAGCAATTCGCTCTCGCTGGTTGATAACATTCCTGCGCCGTCATTGAAGTTCTTG
CGCCAGCATTCGTTGATAACTAGCGCTGCGCCCGAAACCGTGGGCTACCGTTTTATGATTGAGTTCTCCGACGAAATGCT
CAAACATATGCAAATTCAATTGCAATATACGGGCCAAATGCGCGGTCAACGTTTGATCGGCACCTATCGCCAATCATCGG
TGAGCATTCCCGATGTGACGATTGAAATGTATGAGAGTATGCAACCCAAACATGCGGTTTTGCACTGCTACATTCAAGTG
CCCGAGCGCGATCCCTTTGATCAAGCTGGAACCCAAGTGATGGTGGTTTCGCCAACCTATGAAAATAACGGCACAACCGA
TGCCGATGGGTTTGTCTTGTTTGATCGAATCCCGATTGAAGAATTGGCTCGTTTGAAGATCAAAATTCTCAATTAG

Upstream 100 bases:

>100_bases
CAGCCGAGCAATCAAGCGGTTGCGTGACGATCCACGCTGGCAAGCTGTTGCCACTGATCTAGGGATTGCTTACGAATAAC
TATTTTGGTGAGGAACTACC

Downstream 100 bases:

>100_bases
CACGCGTGGGTAGTACGGGTTGTGTTGTGTTCTACCCACGGCTACTAAGCGAGCAAAAGCTAAACCAAAGAGAGAATCAT
TGCTACGATTCCCCAACTTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 211; Mature: 211

Protein sequence:

>211_residues
MNTPLPTASHEIMRQRLVEYAHAVALGAPLDAALQVVADHVETCASCRAELFDALDASYALYSNSLSLVDNIPAPSLKFL
RQHSLITSAAPETVGYRFMIEFSDEMLKHMQIQLQYTGQMRGQRLIGTYRQSSVSIPDVTIEMYESMQPKHAVLHCYIQV
PERDPFDQAGTQVMVVSPTYENNGTTDADGFVLFDRIPIEELARLKIKILN

Sequences:

>Translated_211_residues
MNTPLPTASHEIMRQRLVEYAHAVALGAPLDAALQVVADHVETCASCRAELFDALDASYALYSNSLSLVDNIPAPSLKFL
RQHSLITSAAPETVGYRFMIEFSDEMLKHMQIQLQYTGQMRGQRLIGTYRQSSVSIPDVTIEMYESMQPKHAVLHCYIQV
PERDPFDQAGTQVMVVSPTYENNGTTDADGFVLFDRIPIEELARLKIKILN
>Mature_211_residues
MNTPLPTASHEIMRQRLVEYAHAVALGAPLDAALQVVADHVETCASCRAELFDALDASYALYSNSLSLVDNIPAPSLKFL
RQHSLITSAAPETVGYRFMIEFSDEMLKHMQIQLQYTGQMRGQRLIGTYRQSSVSIPDVTIEMYESMQPKHAVLHCYIQV
PERDPFDQAGTQVMVVSPTYENNGTTDADGFVLFDRIPIEELARLKIKILN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23633; Mature: 23633

Theoretical pI: Translated: 5.03; Mature: 5.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTPLPTASHEIMRQRLVEYAHAVALGAPLDAALQVVADHVETCASCRAELFDALDASYA
CCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LYSNSLSLVDNIPAPSLKFLRQHSLITSAAPETVGYRFMIEFSDEMLKHMQIQLQYTGQM
HHCCCHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEEEHHHHHHHHEEEEEECCCC
RGQRLIGTYRQSSVSIPDVTIEMYESMQPKHAVLHCYIQVPERDPFDQAGTQVMVVSPTY
CCHHHHHHHHHCCCCCCCHHHHHHHCCCCCCEEEEEEEECCCCCCCCHHCCEEEEEECCC
ENNGTTDADGFVLFDRIPIEELARLKIKILN
CCCCCCCCCCEEEEECCCHHHHHHEEEEECC
>Mature Secondary Structure
MNTPLPTASHEIMRQRLVEYAHAVALGAPLDAALQVVADHVETCASCRAELFDALDASYA
CCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LYSNSLSLVDNIPAPSLKFLRQHSLITSAAPETVGYRFMIEFSDEMLKHMQIQLQYTGQM
HHCCCHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEEEHHHHHHHHEEEEEECCCC
RGQRLIGTYRQSSVSIPDVTIEMYESMQPKHAVLHCYIQVPERDPFDQAGTQVMVVSPTY
CCHHHHHHHHHCCCCCCCHHHHHHHCCCCCCEEEEEEEECCCCCCCCHHCCEEEEEECCC
ENNGTTDADGFVLFDRIPIEELARLKIKILN
CCCCCCCCCCEEEEECCCHHHHHHEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA