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The map label for this gene is selD [H]

Identifier: 159897757

GI number: 159897757

Start: 1421012

End: 1421995

Strand: Reverse

Name: selD [H]

Synonym: Haur_1228

Alternate gene names: 159897757

Gene position: 1421995-1421012 (Counterclockwise)

Preceding gene: 159897759

Following gene: 159897749

Centisome position: 22.41

GC content: 49.8

Gene sequence:

>984_bases
ATGGGGGCAGGTGCTCTCAGCAATTTAATTAGTAGCTTGCGTTTACCCAGCAGCCCGCAGCTTTTAGTTGGCCTTGATGT
CAGCGATGATGCGGCGGTCTATCAACTCAACCAACAGCAAGCGCTCGTCCAAACGGTGGATTTCTTTCCGCCGATTGTTG
ATGATCCCTATAGTTTTGGGGCGATTGCTGCCGCCAACGCGCTAAGCGATGTTTATGCCATGGGCGGCAAGCCAATTTTA
GCCTTGGCAATTGCTGGATTCCCACGCGATTTAGACCCAGCGATCATTCAGGCTATTATGCAGGGCGGCGCAGATAAAGT
GGCCGAAGCCGGAGCTGTGCTAGCTGGCGGCCATACGATCATCGATAATGAGCCAAAATATGGTTTATGCGTGACTGGTT
TAATCGATCCAGCCCTAATCACCCGTAAAGCTCAAGCTCAACCAGGCGATCAACTCTACCTTACCAAAGCGCTGGGCACA
GGCGTAATTAGCACTGCCAGCAAGCGCCAAATTGCTGATCCAGCCGATTTAGCAGCAGCAATTGAGAGCATGCTCAAACT
CAATCGCCATGCAGCTGAGCATATCGCAATGCTGGGCACAATTCGTAGTGCCACCGATATCACTGGGTTTGGTTTGTTGG
GCCATGGCTTGGAGCTAGCTCGCAATAGTGGGGTTGGGCTACAGATTAATAGTCGAGCCTTGCCATTGTTGTCAGGAGCT
TATCGGTATGCCAAAGCCGGAATTATGCCTGGTGGCTTGCATACCAATCGTGCTTATGTTGAGCAACAAATGCAAGTTAA
TTATGCCAAAACAGTTGATCCAGTCCATCAAGCTTTGTTGTACGATCCTCAAACTTCAGGCGGCTTGTTAATTGCGGTAG
CGGCGGAGCATGCCAAAGCACTTGAACAACAATTTGCTCAAGCTGGCGACCCACTTTGGTCAATTGGTACAGTCATTGAA
CTGCAAGCGCTTGAAATTGTTTAA

Upstream 100 bases:

>100_bases
AATTCTTTAATTTCTATGTGATTTAGTGAGCAGACTCATGGCTGATCGTGAACAAATTCGCCTGACTGAGCTAGCTTCTT
GTGCTGGCTGAGCCGCTAAA

Downstream 100 bases:

>100_bases
AACTAAGGATCAGCTGTCGGGAACTAAATCAGCATACATTTGGGTTGGGGTTTAACGCAAAGGCGCAGCGAAACAATGGC
TATCGACTATCGGCTATCAG

Product: selenide, water dikinase

Products: NA

Alternate protein names: Selenium donor protein; Selenophosphate synthase [H]

Number of amino acids: Translated: 327; Mature: 326

Protein sequence:

>327_residues
MGAGALSNLISSLRLPSSPQLLVGLDVSDDAAVYQLNQQQALVQTVDFFPPIVDDPYSFGAIAAANALSDVYAMGGKPIL
ALAIAGFPRDLDPAIIQAIMQGGADKVAEAGAVLAGGHTIIDNEPKYGLCVTGLIDPALITRKAQAQPGDQLYLTKALGT
GVISTASKRQIADPADLAAAIESMLKLNRHAAEHIAMLGTIRSATDITGFGLLGHGLELARNSGVGLQINSRALPLLSGA
YRYAKAGIMPGGLHTNRAYVEQQMQVNYAKTVDPVHQALLYDPQTSGGLLIAVAAEHAKALEQQFAQAGDPLWSIGTVIE
LQALEIV

Sequences:

>Translated_327_residues
MGAGALSNLISSLRLPSSPQLLVGLDVSDDAAVYQLNQQQALVQTVDFFPPIVDDPYSFGAIAAANALSDVYAMGGKPIL
ALAIAGFPRDLDPAIIQAIMQGGADKVAEAGAVLAGGHTIIDNEPKYGLCVTGLIDPALITRKAQAQPGDQLYLTKALGT
GVISTASKRQIADPADLAAAIESMLKLNRHAAEHIAMLGTIRSATDITGFGLLGHGLELARNSGVGLQINSRALPLLSGA
YRYAKAGIMPGGLHTNRAYVEQQMQVNYAKTVDPVHQALLYDPQTSGGLLIAVAAEHAKALEQQFAQAGDPLWSIGTVIE
LQALEIV
>Mature_326_residues
GAGALSNLISSLRLPSSPQLLVGLDVSDDAAVYQLNQQQALVQTVDFFPPIVDDPYSFGAIAAANALSDVYAMGGKPILA
LAIAGFPRDLDPAIIQAIMQGGADKVAEAGAVLAGGHTIIDNEPKYGLCVTGLIDPALITRKAQAQPGDQLYLTKALGTG
VISTASKRQIADPADLAAAIESMLKLNRHAAEHIAMLGTIRSATDITGFGLLGHGLELARNSGVGLQINSRALPLLSGAY
RYAKAGIMPGGLHTNRAYVEQQMQVNYAKTVDPVHQALLYDPQTSGGLLIAVAAEHAKALEQQFAQAGDPLWSIGTVIEL
QALEIV

Specific function: Synthesizes selenophosphate from selenide and ATP [H]

COG id: COG0709

COG function: function code E; Selenophosphate synthase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the selenophosphate synthase 1 family. Class I subfamily [H]

Homologues:

Organism=Homo sapiens, GI24797148, Length=304, Percent_Identity=32.5657894736842, Blast_Score=108, Evalue=5e-24,
Organism=Homo sapiens, GI15011844, Length=328, Percent_Identity=29.5731707317073, Blast_Score=96, Evalue=4e-20,
Organism=Escherichia coli, GI1788062, Length=302, Percent_Identity=42.7152317880795, Blast_Score=232, Evalue=3e-62,
Organism=Caenorhabditis elegans, GI17543426, Length=317, Percent_Identity=32.4921135646688, Blast_Score=112, Evalue=2e-25,
Organism=Drosophila melanogaster, GI24653602, Length=348, Percent_Identity=32.7586206896552, Blast_Score=114, Evalue=1e-25,
Organism=Drosophila melanogaster, GI24653604, Length=348, Percent_Identity=32.7586206896552, Blast_Score=114, Evalue=1e-25,
Organism=Drosophila melanogaster, GI28574119, Length=311, Percent_Identity=29.5819935691318, Blast_Score=94, Evalue=2e-19,
Organism=Drosophila melanogaster, GI28574118, Length=220, Percent_Identity=32.7272727272727, Blast_Score=82, Evalue=5e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000728
- InterPro:   IPR010918
- InterPro:   IPR016188
- InterPro:   IPR004536
- InterPro:   IPR023061 [H]

Pfam domain/function: PF00586 AIRS; PF02769 AIRS_C [H]

EC number: =2.7.9.3 [H]

Molecular weight: Translated: 34105; Mature: 33973

Theoretical pI: Translated: 5.06; Mature: 5.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGAGALSNLISSLRLPSSPQLLVGLDVSDDAAVYQLNQQQALVQTVDFFPPIVDDPYSFG
CCCHHHHHHHHHHCCCCCCCEEEEECCCCCCCEEEECHHHHHHHHHHHCCCCCCCCCCCH
AIAAANALSDVYAMGGKPILALAIAGFPRDLDPAIIQAIMQGGADKVAEAGAVLAGGHTI
HHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCHHHHHHHHHCCHHHHHHCCEEEECCEEE
IDNEPKYGLCVTGLIDPALITRKAQAQPGDQLYLTKALGTGVISTASKRQIADPADLAAA
ECCCCCCCEEECCCCCHHHHHHHHCCCCCCEEEEEHHHCCCHHCCCCHHCCCCHHHHHHH
IESMLKLNRHAAEHIAMLGTIRSATDITGFGLLGHGLELARNSGVGLQINSRALPLLSGA
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCEEECCCCCHHHHHH
YRYAKAGIMPGGLHTNRAYVEQQMQVNYAKTVDPVHQALLYDPQTSGGLLIAVAAEHAKA
HHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEHHHHHH
LEQQFAQAGDPLWSIGTVIELQALEIV
HHHHHHHCCCCCEECCCEEEEEEEECC
>Mature Secondary Structure 
GAGALSNLISSLRLPSSPQLLVGLDVSDDAAVYQLNQQQALVQTVDFFPPIVDDPYSFG
CCHHHHHHHHHHCCCCCCCEEEEECCCCCCCEEEECHHHHHHHHHHHCCCCCCCCCCCH
AIAAANALSDVYAMGGKPILALAIAGFPRDLDPAIIQAIMQGGADKVAEAGAVLAGGHTI
HHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCHHHHHHHHHCCHHHHHHCCEEEECCEEE
IDNEPKYGLCVTGLIDPALITRKAQAQPGDQLYLTKALGTGVISTASKRQIADPADLAAA
ECCCCCCCEEECCCCCHHHHHHHHCCCCCCEEEEEHHHCCCHHCCCCHHCCCCHHHHHHH
IESMLKLNRHAAEHIAMLGTIRSATDITGFGLLGHGLELARNSGVGLQINSRALPLLSGA
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCEEECCCCCHHHHHH
YRYAKAGIMPGGLHTNRAYVEQQMQVNYAKTVDPVHQALLYDPQTSGGLLIAVAAEHAKA
HHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEHHHHHH
LEQQFAQAGDPLWSIGTVIELQALEIV
HHHHHHHCCCCCEECCCEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA