| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159897717
Identifier: 159897717
GI number: 159897717
Start: 1364922
End: 1366547
Strand: Direct
Name: 159897717
Synonym: Haur_1188
Alternate gene names: NA
Gene position: 1364922-1366547 (Clockwise)
Preceding gene: 159897715
Following gene: 159897718
Centisome position: 21.51
GC content: 51.85
Gene sequence:
>1626_bases ATGAGCCGTCGCATTGCACTTGTTTTTTGTTTGATCTTGCTGGTCGGCACGCCAGTCTATGCCCAAAATGCCTTAACTGG CCCACCCAACGACCCCGACGCAAATAAACAATGGGTCATTCGCCAACTTGGTTTAGCGTGTGCATGGGAGCATTTGACGG GTAACTCCGATGTTACTGTGGCCGTGATCGACTCTGGCGTTGATATGAACCACCCCGATTTGGTCGATGTCTTGCGCACC GACGGCTTTGATGCTGTCGATGGCGATGATGATCCATCGGATGAGAATGGCCACGGAACCCATGTTTCAGGCATTATTGC CGCCACCATCAACAACAGTAAAGGAATTGCAGGGGTTGCCGGTGGGGGCACGCGCATTTTGCCAATTCGGGTGATGGCTG CCGATGGTTCGGGCACGAATCAAGATATTATTGCGGGCATTCGCTATGCCGTTAGCAAAAATGTCCAGATCATCAATATG AGCCTTGGCTCGATGTTACCGCTCGATAGCGAAGATATTGTTGAGGCAATCAAAGAGGCCGATGCCGCTGGCGTACTGGT GATTATCGCCGCTGGTAATTCGTTTGTGCCCTTGCCCAACTTCGCCTTTGGGGTTGAAGAATTTGCCATGGTCGTGGCCG CAACTGATCCTGATGATCGCAAAACCGATTTTTCGAACTATGGTAAGTGGATTTCGGTTTCGGCACCAGGGGCAGGCATT TACTCAACAATGCCCACCTACGATGTGTATATGACCAGTCAGTTGCCTGCTGAAGAACGCTTCAACAAAAACTACGATCA AATGAGCGGCACATCGCAAGCTACGCCAGTGGTTGCTGGCTTGGCAGCCTTGCTATTTGCCCAACACCCCGATTGGAATG CCGACCAAGTACGGGCTGAAATCGAAAAAACTGCTGATGATATTTCAGCGCAAAATCCGATTAAGCGCTATGGCCCAATC ACCTATTTCGAGCCAAGCAACCTTGGCAAAGGCCGTGTCAATGCTTGCAATGCCTTGGGTGGCCCAGTTAAAGGTAGTGC TGCAGCAGTTGGCGGCCCTGAAGGAAAATCCAATTTAATCATGCTGCTTGGGTTTAGCGCGGTCATGTTGGTAGTTTTGG GCGGATTAACCGTCTTTTTAATTCGCCGTCGCAAGCACAACGCCCGCCCTGCGGCGATTCCCGCTGGTGGTTTTGCCCCA CCGCCACCAATTCATTATGATCAAGCAATGGCCCAACAGCAACGCAACCTTGCCTCGCAACCAATCGTCGGATCAACGCC GCCATTGAACCAGAGTTATGCCCCACCCAGCGCGGCTCCGGCAGGCGGGCCAGCGTGGGGCAAATTAACGGTTGTCCGGG GAGCCGAATTGAACAAGTTCTATTTGCTGCGTGAAAATCAAATTTTTATTGGCCGTGAAGCCTCGCTTGCCGTGGCAATT AGCGGTGATAGCACCGTTTCACGTCGCCATACGATCATCTATCGTGATCCTCGTGGCATTGAAATTGAAGATGCAGGCAG CAGTCATGGCACCAAAATCAACGGCATTCCAGTACAAGGCCGCCAACTGGTTCGACCAGGCGATGTGATCGAAGTTGGGC AGACCCATTTACGTTTTGAGGGTTAA
Upstream 100 bases:
>100_bases CAGGCTGTGAGTGTAAGCAAAAGGCAGCCAATAAGCAACTGTTTGAAACGCATGGGGAATCCTCCAGCGTGCTGAGTGTT TGTCAGGAGGCGATTATATC
Downstream 100 bases:
>100_bases CATTTGGAACTAGCACTTGCATTGTTGATTATGTTTCTCGGCTTGGTGAGCGTGGTAATTTTGCCAATCTTGCCAGGCGC AGCCTTGATTTGGCTTGGGG
Product: FHA domain-containing protein
Products: NA
Alternate protein names: Ak.1 protease [H]
Number of amino acids: Translated: 541; Mature: 540
Protein sequence:
>541_residues MSRRIALVFCLILLVGTPVYAQNALTGPPNDPDANKQWVIRQLGLACAWEHLTGNSDVTVAVIDSGVDMNHPDLVDVLRT DGFDAVDGDDDPSDENGHGTHVSGIIAATINNSKGIAGVAGGGTRILPIRVMAADGSGTNQDIIAGIRYAVSKNVQIINM SLGSMLPLDSEDIVEAIKEADAAGVLVIIAAGNSFVPLPNFAFGVEEFAMVVAATDPDDRKTDFSNYGKWISVSAPGAGI YSTMPTYDVYMTSQLPAEERFNKNYDQMSGTSQATPVVAGLAALLFAQHPDWNADQVRAEIEKTADDISAQNPIKRYGPI TYFEPSNLGKGRVNACNALGGPVKGSAAAVGGPEGKSNLIMLLGFSAVMLVVLGGLTVFLIRRRKHNARPAAIPAGGFAP PPPIHYDQAMAQQQRNLASQPIVGSTPPLNQSYAPPSAAPAGGPAWGKLTVVRGAELNKFYLLRENQIFIGREASLAVAI SGDSTVSRRHTIIYRDPRGIEIEDAGSSHGTKINGIPVQGRQLVRPGDVIEVGQTHLRFEG
Sequences:
>Translated_541_residues MSRRIALVFCLILLVGTPVYAQNALTGPPNDPDANKQWVIRQLGLACAWEHLTGNSDVTVAVIDSGVDMNHPDLVDVLRT DGFDAVDGDDDPSDENGHGTHVSGIIAATINNSKGIAGVAGGGTRILPIRVMAADGSGTNQDIIAGIRYAVSKNVQIINM SLGSMLPLDSEDIVEAIKEADAAGVLVIIAAGNSFVPLPNFAFGVEEFAMVVAATDPDDRKTDFSNYGKWISVSAPGAGI YSTMPTYDVYMTSQLPAEERFNKNYDQMSGTSQATPVVAGLAALLFAQHPDWNADQVRAEIEKTADDISAQNPIKRYGPI TYFEPSNLGKGRVNACNALGGPVKGSAAAVGGPEGKSNLIMLLGFSAVMLVVLGGLTVFLIRRRKHNARPAAIPAGGFAP PPPIHYDQAMAQQQRNLASQPIVGSTPPLNQSYAPPSAAPAGGPAWGKLTVVRGAELNKFYLLRENQIFIGREASLAVAI SGDSTVSRRHTIIYRDPRGIEIEDAGSSHGTKINGIPVQGRQLVRPGDVIEVGQTHLRFEG >Mature_540_residues SRRIALVFCLILLVGTPVYAQNALTGPPNDPDANKQWVIRQLGLACAWEHLTGNSDVTVAVIDSGVDMNHPDLVDVLRTD GFDAVDGDDDPSDENGHGTHVSGIIAATINNSKGIAGVAGGGTRILPIRVMAADGSGTNQDIIAGIRYAVSKNVQIINMS LGSMLPLDSEDIVEAIKEADAAGVLVIIAAGNSFVPLPNFAFGVEEFAMVVAATDPDDRKTDFSNYGKWISVSAPGAGIY STMPTYDVYMTSQLPAEERFNKNYDQMSGTSQATPVVAGLAALLFAQHPDWNADQVRAEIEKTADDISAQNPIKRYGPIT YFEPSNLGKGRVNACNALGGPVKGSAAAVGGPEGKSNLIMLLGFSAVMLVVLGGLTVFLIRRRKHNARPAAIPAGGFAPP PPIHYDQAMAQQQRNLASQPIVGSTPPLNQSYAPPSAAPAGGPAWGKLTVVRGAELNKFYLLRENQIFIGREASLAVAIS GDSTVSRRHTIIYRDPRGIEIEDAGSSHGTKINGIPVQGRQLVRPGDVIEVGQTHLRFEG
Specific function: Unknown
COG id: COG1404
COG function: function code O; Subtilisin-like serine proteases
Gene ontology:
Cell location: Secreted [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase S8 family [H]
Homologues:
Organism=Homo sapiens, GI76443679, Length=290, Percent_Identity=27.9310344827586, Blast_Score=69, Evalue=8e-12, Organism=Saccharomyces cerevisiae, GI6324576, Length=249, Percent_Identity=34.136546184739, Blast_Score=93, Evalue=1e-19, Organism=Saccharomyces cerevisiae, GI6319893, Length=330, Percent_Identity=27.2727272727273, Blast_Score=88, Evalue=4e-18, Organism=Saccharomyces cerevisiae, GI6320775, Length=245, Percent_Identity=31.8367346938775, Blast_Score=87, Evalue=5e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000209 - InterPro: IPR022398 - InterPro: IPR015500 - InterPro: IPR009020 [H]
Pfam domain/function: PF00082 Peptidase_S8 [H]
EC number: NA
Molecular weight: Translated: 57201; Mature: 57070
Theoretical pI: Translated: 5.45; Mature: 5.45
Prosite motif: PS50006 FHA_DOMAIN ; PS00136 SUBTILASE_ASP ; PS00137 SUBTILASE_HIS ; PS00138 SUBTILASE_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRRIALVFCLILLVGTPVYAQNALTGPPNDPDANKQWVIRQLGLACAWEHLTGNSDVTV CCCHHHHHHHHHHHHCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEE AVIDSGVDMNHPDLVDVLRTDGFDAVDGDDDPSDENGHGTHVSGIIAATINNSKGIAGVA EEEECCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCEEEEC GGGTRILPIRVMAADGSGTNQDIIAGIRYAVSKNVQIINMSLGSMLPLDSEDIVEAIKEA CCCEEEEEEEEEEECCCCCCHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHHC DAAGVLVIIAAGNSFVPLPNFAFGVEEFAMVVAATDPDDRKTDFSNYGKWISVSAPGAGI CCCCEEEEEECCCCCCCCCCHHHCCCCEEEEEEECCCCCCCCCHHHCCCEEEEECCCCCC YSTMPTYDVYMTSQLPAEERFNKNYDQMSGTSQATPVVAGLAALLFAQHPDWNADQVRAE CCCCCCEEEEEECCCCHHHHHCCCHHHHCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHH IEKTADDISAQNPIKRYGPITYFEPSNLGKGRVNACNALGGPVKGSAAAVGGPEGKSNLI HHHHHHHHHCCCCHHHHCCEEEECCCCCCCCCCCHHHCCCCCCCCCEEECCCCCCCCCEE MLLGFSAVMLVVLGGLTVFLIRRRKHNARPAAIPAGGFAPPPPIHYDQAMAQQQRNLASQ EEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCC PIVGSTPPLNQSYAPPSAAPAGGPAWGKLTVVRGAELNKFYLLRENQIFIGREASLAVAI CCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEEECCEEEEECCCEEEEEE SGDSTVSRRHTIIYRDPRGIEIEDAGSSHGTKINGIPVQGRQLVRPGDVIEVGQTHLRFE CCCCCCCCCEEEEEECCCCCEEECCCCCCCCEECCCCCCCCEECCCCCEEECCCCEEEEC G C >Mature Secondary Structure SRRIALVFCLILLVGTPVYAQNALTGPPNDPDANKQWVIRQLGLACAWEHLTGNSDVTV CCHHHHHHHHHHHHCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEE AVIDSGVDMNHPDLVDVLRTDGFDAVDGDDDPSDENGHGTHVSGIIAATINNSKGIAGVA EEEECCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCEEEEC GGGTRILPIRVMAADGSGTNQDIIAGIRYAVSKNVQIINMSLGSMLPLDSEDIVEAIKEA CCCEEEEEEEEEEECCCCCCHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHHC DAAGVLVIIAAGNSFVPLPNFAFGVEEFAMVVAATDPDDRKTDFSNYGKWISVSAPGAGI CCCCEEEEEECCCCCCCCCCHHHCCCCEEEEEEECCCCCCCCCHHHCCCEEEEECCCCCC YSTMPTYDVYMTSQLPAEERFNKNYDQMSGTSQATPVVAGLAALLFAQHPDWNADQVRAE CCCCCCEEEEEECCCCHHHHHCCCHHHHCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHH IEKTADDISAQNPIKRYGPITYFEPSNLGKGRVNACNALGGPVKGSAAAVGGPEGKSNLI HHHHHHHHHCCCCHHHHCCEEEECCCCCCCCCCCHHHCCCCCCCCCEEECCCCCCCCCEE MLLGFSAVMLVVLGGLTVFLIRRRKHNARPAAIPAGGFAPPPPIHYDQAMAQQQRNLASQ EEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCC PIVGSTPPLNQSYAPPSAAPAGGPAWGKLTVVRGAELNKFYLLRENQIFIGREASLAVAI CCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEEECCEEEEECCCEEEEEE SGDSTVSRRHTIIYRDPRGIEIEDAGSSHGTKINGIPVQGRQLVRPGDVIEVGQTHLRFE CCCCCCCCCEEEEEECCCCCEEECCCCCCCCEECCCCCCCCEECCCCCEEECCCCEEEEC G C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7993087; 10588904 [H]